FFCP PHASE1:Hg19::chr7:39663061..39663072,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5898 | |EntrezGene=5898 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9839 | |HGNC=9839 | ||
|TSSclassifier=strong | |||
|UniProt=P11233 | |UniProt=P11233 | ||
|association_with_transcript=-9bp_to_ENST00000005257_5end | |association_with_transcript=-9bp_to_ENST00000005257_5end | ||
|cluster_id=chr7:39663061..39663072,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_6_at_RALA_5end | |description=CAGE_peak_6_at_RALA_5end | ||
|id=chr7:39663061..39663072,+ | |id=chr7:39663061..39663072,+ | ||
|ontology_enrichment_celltype=CL:0002139!8.87e-25!24;CL:0000115!1.15e-21!35;CL:0000071!7.78e-19!18;CL:0002546!7.78e-19!18;CL:0002078!1.42e-14!44;CL:1000413!3.84e-10!9;CL:0000213!4.76e-10!57;CL:0000215!4.76e-10!57;CL:0000222!6.33e-08!119;CL:0002543!1.54e-07!6;CL:0005020!1.71e-07!6;CL:0002138!1.71e-07!6;CL:0005022!1.71e-07!6;CL:0002544!2.50e-07!6 | |ontology_enrichment_celltype=CL:0002139!8.87e-25!24;CL:0000115!1.15e-21!35;CL:0000071!7.78e-19!18;CL:0002546!7.78e-19!18;CL:0002078!1.42e-14!44;CL:1000413!3.84e-10!9;CL:0000213!4.76e-10!57;CL:0000215!4.76e-10!57;CL:0000222!6.33e-08!119;CL:0002543!1.54e-07!6;CL:0005020!1.71e-07!6;CL:0002138!1.71e-07!6;CL:0005022!1.71e-07!6;CL:0002544!2.50e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.84e-93;24!CL:0000115;1.22e-74;36!CL:0000071;9.07e-70;18!CL:0002078;4.64e-46;45!CL:1000413;2.69e-35;9!CL:0000213;1.37e-31;58!CL:0000215;1.37e-31;58!CL:0002543;5.58e-25;6!CL:0002138;8.04e-25;6!CL:0002544;3.15e-24;6!CL:0002618;1.25e-13;3!CL:0002188;6.00e-13;5!CL:0002144;1.31e-12;3!CL:0000076;1.09e-10;63!CL:1000746;2.89e-09;7!CL:1000612;2.89e-09;7!CL:0002545;3.91e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.50e-93,24;CL:0000115,2.60e-89,36;CL:0002078,5.71e-70,45;CL:0000071,8.00e-70,18;CL:0002546,8.00e-70,18;CL:0000213,1.25e-52,58;CL:0000215,1.25e-52,58;CL:1000413,2.76e-35,9;CL:0002543,4.97e-25,6;CL:0000222,7.10e-25,121;CL:0005020,7.45e-25,6;CL:0002138,7.45e-25,6;CL:0005022,7.45e-25,6;CL:0002544,3.30e-24,6;CL:0000076,1.11e-16,63;CL:0002618,1.26e-13,3;CL:0002188,6.21e-13,5;CL:0002144,1.26e-12,3;CL:1000746,2.96e-09,7;CL:1000612,2.96e-09,7;CL:0002545,4.08e-09,2;CL:0002321,7.71e-09,250;CL:0000066,2.57e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;9.07e-70;18!CL:0005022;8.04e-25;6!CL:0000222;4.80e-09;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.44e-22!84;UBERON:0000055!4.61e-21!69;UBERON:0002049!1.89e-20!79;UBERON:0007798!1.89e-20!79;UBERON:0004535!8.62e-20!110;UBERON:0001009!1.72e-19!113;UBERON:0001986!7.78e-19!18;UBERON:0004638!7.78e-19!18;UBERON:0004852!7.78e-19!18;UBERON:0001981!5.51e-18!60;UBERON:0007500!5.51e-18!60;UBERON:0004537!5.51e-18!60;UBERON:0006965!5.51e-18!60;UBERON:0003081!1.96e-14!216;UBERON:0000487!6.58e-14!22;UBERON:0003914!2.64e-13!118;UBERON:0001637!1.79e-11!42;UBERON:0003509!1.79e-11!42;UBERON:0004572!1.79e-11!42;UBERON:0006914!2.64e-11!25;UBERON:0003915!3.84e-10!9;UBERON:0004700!3.84e-10!9;UBERON:0001917!3.84e-10!9;UBERON:0000947!3.29e-09!21;UBERON:0010191!3.29e-09!21;UBERON:0000926!1.40e-08!448;UBERON:0004120!1.40e-08!448;UBERON:0006603!1.40e-08!448;UBERON:0004573!6.67e-08!33;UBERON:0004571!6.67e-08!33;UBERON:0001638!4.02e-07!9;UBERON:0003920!4.02e-07!9;UBERON:0004582!4.02e-07!9;UBERON:0004111!8.15e-07!241 | |ontology_enrichment_uberon=UBERON:0004872!1.44e-22!84;UBERON:0000055!4.61e-21!69;UBERON:0002049!1.89e-20!79;UBERON:0007798!1.89e-20!79;UBERON:0004535!8.62e-20!110;UBERON:0001009!1.72e-19!113;UBERON:0001986!7.78e-19!18;UBERON:0004638!7.78e-19!18;UBERON:0004852!7.78e-19!18;UBERON:0001981!5.51e-18!60;UBERON:0007500!5.51e-18!60;UBERON:0004537!5.51e-18!60;UBERON:0006965!5.51e-18!60;UBERON:0003081!1.96e-14!216;UBERON:0000487!6.58e-14!22;UBERON:0003914!2.64e-13!118;UBERON:0001637!1.79e-11!42;UBERON:0003509!1.79e-11!42;UBERON:0004572!1.79e-11!42;UBERON:0006914!2.64e-11!25;UBERON:0003915!3.84e-10!9;UBERON:0004700!3.84e-10!9;UBERON:0001917!3.84e-10!9;UBERON:0000947!3.29e-09!21;UBERON:0010191!3.29e-09!21;UBERON:0000926!1.40e-08!448;UBERON:0004120!1.40e-08!448;UBERON:0006603!1.40e-08!448;UBERON:0004573!6.67e-08!33;UBERON:0004571!6.67e-08!33;UBERON:0001638!4.02e-07!9;UBERON:0003920!4.02e-07!9;UBERON:0004582!4.02e-07!9;UBERON:0004111!8.15e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.07e-70;18!UBERON:0001986;9.07e-70;18!UBERON:0004852;9.07e-70;18!UBERON:0000487;3.07e-56;22!UBERON:0006914;6.20e-49;25!UBERON:0003915;2.69e-35;9!UBERON:0004700;2.69e-35;9!UBERON:0001917;2.69e-35;9!UBERON:0000490;5.92e-33;33!UBERON:0000055;2.26e-24;65!UBERON:0007500;3.93e-19;56!UBERON:0001981;3.93e-19;56!UBERON:0004537;3.93e-19;56!UBERON:0001473;1.91e-18;8!UBERON:0004536;1.91e-18;8!UBERON:0006558;1.91e-18;8!UBERON:0001638;2.01e-16;9!UBERON:0003920;2.01e-16;9!UBERON:0004582;2.01e-16;9!UBERON:0002049;1.63e-15;75!UBERON:0007798;1.63e-15;75!UBERON:0002465;1.29e-14;10!UBERON:0003914;7.56e-14;74!UBERON:0000947;1.08e-13;21!UBERON:0010191;1.08e-13;21!UBERON:0010523;1.31e-12;3!UBERON:0001915;1.31e-12;3!UBERON:0001982;1.31e-12;3!UBERON:0000025;2.26e-11;93!UBERON:0001637;1.48e-10;42!UBERON:0003509;1.48e-10;42!UBERON:0004572;1.48e-10;42!UBERON:0004535;2.75e-10;109!UBERON:0000074;2.89e-09;7!UBERON:0001229;2.89e-09;7!UBERON:0005800;3.91e-09;2!UBERON:0001515;3.91e-09;2!UBERON:0001009;1.00e-08;112!UBERON:0004111;2.22e-08;130!UBERON:0002066;2.49e-08;5!UBERON:0004573;3.76e-08;33!UBERON:0004571;3.76e-08;33 | |||
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| ||
|short_description=p6@RALA | |short_description=p6@RALA | ||
}} | }} |
Latest revision as of 13:21, 18 September 2015
Short description: | p6@RALA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RALA_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | -9bp_to_ENST00000005257_5end |
EntrezGene: | RALA |
HGNC: | 9839 |
UniProt: | P11233 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.50e-93 | 24 |
endothelial cell | 2.60e-89 | 36 |
meso-epithelial cell | 5.71e-70 | 45 |
blood vessel endothelial cell | 8.00e-70 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.00e-70 | 18 |
lining cell | 1.25e-52 | 58 |
barrier cell | 1.25e-52 | 58 |
endothelial cell of artery | 2.76e-35 | 9 |
vein endothelial cell | 4.97e-25 | 6 |
mesodermal cell | 7.10e-25 | 121 |
lymphangioblast | 7.45e-25 | 6 |
endothelial cell of lymphatic vessel | 7.45e-25 | 6 |
vascular lymphangioblast | 7.45e-25 | 6 |
aortic endothelial cell | 3.30e-24 | 6 |
squamous epithelial cell | 1.11e-16 | 63 |
endothelial cell of umbilical vein | 1.26e-13 | 3 |
glomerular endothelial cell | 6.21e-13 | 5 |
capillary endothelial cell | 1.26e-12 | 3 |
glomerular cell | 2.96e-09 | 7 |
kidney corpuscule cell | 2.96e-09 | 7 |
thoracic aorta endothelial cell | 4.08e-09 | 2 |
embryonic cell | 7.71e-09 | 250 |
epithelial cell | 2.57e-07 | 253 |