FFCP PHASE1:Hg19::chr8:101118185..101118205,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26166 | |EntrezGene=26166 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24499 | |HGNC=24499 | ||
|TSSclassifier=strong | |||
|UniProt=A8K944 | |UniProt=A8K944 | ||
|association_with_transcript=0bp_to_ENST00000523437_5end | |association_with_transcript=0bp_to_ENST00000523437_5end | ||
|cluster_id=chr8:101118185..101118205,- | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_2_at_RGS22_5end | |description=CAGE_peak_2_at_RGS22_5end | ||
|id=chr8:101118185..101118205,- | |id=chr8:101118185..101118205,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;4.42e-14;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.52e-12,15 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.91e-12;1!UBERON:0009117;9.38e-11;10!UBERON:0005564;9.38e-11;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.35e-51!115;UBERON:0001049!9.30e-49!57;UBERON:0005068!9.30e-49!57;UBERON:0006241!9.30e-49!57;UBERON:0007135!9.30e-49!57;UBERON:0002616!5.73e-44!59;UBERON:0003075!3.79e-39!86;UBERON:0007284!3.79e-39!86;UBERON:0002780!9.54e-39!41;UBERON:0001890!9.54e-39!41;UBERON:0006240!9.54e-39!41;UBERON:0003080!1.29e-37!42;UBERON:0001017!1.92e-37!82;UBERON:0000955!2.97e-37!69;UBERON:0006238!2.97e-37!69;UBERON:0005743!7.49e-37!86;UBERON:0002346!8.47e-37!90;UBERON:0000073!8.21e-36!94;UBERON:0001016!8.21e-36!94;UBERON:0002020!1.41e-32!34;UBERON:0003528!1.41e-32!34;UBERON:0001893!1.49e-32!34;UBERON:0002791!6.89e-31!33;UBERON:0001869!4.02e-29!32;UBERON:0003056!2.30e-28!61;UBERON:0000033!7.53e-24!123;UBERON:0000153!2.56e-23!129;UBERON:0007811!2.56e-23!129;UBERON:0002308!1.11e-18!9;UBERON:0000125!1.11e-18!9;UBERON:0004121!1.19e-18!169;UBERON:0000924!6.78e-18!173;UBERON:0006601!6.78e-18!173;UBERON:0000956!1.40e-17!25;UBERON:0000203!1.40e-17!25;UBERON:0002619!9.79e-16!22;UBERON:0000025!3.49e-15!194;UBERON:0009663!4.77e-15!7;UBERON:0002420!5.94e-15!9;UBERON:0007245!5.94e-15!9;UBERON:0010009!5.94e-15!9;UBERON:0010011!5.94e-15!9;UBERON:0000454!5.94e-15!9;UBERON:0004732!3.15e-14!13;UBERON:0002298!1.08e-12!8;UBERON:0001950!1.23e-12!20;UBERON:0004733!2.21e-12!12;UBERON:0002028!2.21e-12!12;UBERON:0007277!2.21e-12!12;UBERON:0003076!5.86e-12!15;UBERON:0003057!5.86e-12!15;UBERON:0004111!1.85e-11!241;UBERON:0000064!7.89e-11!219;UBERON:0000477!1.06e-09!286;UBERON:0000483!1.55e-09!309;UBERON:0000119!2.67e-09!312;UBERON:0000369!4.35e-09!4;UBERON:0002435!4.35e-09!4;UBERON:0000204!4.35e-09!4;UBERON:0010082!4.35e-09!4;UBERON:0001871!1.56e-08!7;UBERON:0000200!7.20e-08!6;UBERON:0001896!1.25e-07!3;UBERON:0005290!1.25e-07!3;UBERON:0010096!1.25e-07!3;UBERON:0000475!1.55e-07!365;UBERON:0001894!1.62e-07!7;UBERON:0006222!1.62e-07!7;UBERON:0000349!1.63e-07!5;UBERON:0002680!3.00e-07!9;UBERON:0001895!3.00e-07!9;UBERON:0010092!3.00e-07!9;UBERON:0006331!3.30e-07!3;UBERON:0005383!3.37e-07!3;UBERON:0005382!3.37e-07!3;UBERON:0000988!7.77e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!2.35e-51!115;UBERON:0001049!9.30e-49!57;UBERON:0005068!9.30e-49!57;UBERON:0006241!9.30e-49!57;UBERON:0007135!9.30e-49!57;UBERON:0002616!5.73e-44!59;UBERON:0003075!3.79e-39!86;UBERON:0007284!3.79e-39!86;UBERON:0002780!9.54e-39!41;UBERON:0001890!9.54e-39!41;UBERON:0006240!9.54e-39!41;UBERON:0003080!1.29e-37!42;UBERON:0001017!1.92e-37!82;UBERON:0000955!2.97e-37!69;UBERON:0006238!2.97e-37!69;UBERON:0005743!7.49e-37!86;UBERON:0002346!8.47e-37!90;UBERON:0000073!8.21e-36!94;UBERON:0001016!8.21e-36!94;UBERON:0002020!1.41e-32!34;UBERON:0003528!1.41e-32!34;UBERON:0001893!1.49e-32!34;UBERON:0002791!6.89e-31!33;UBERON:0001869!4.02e-29!32;UBERON:0003056!2.30e-28!61;UBERON:0000033!7.53e-24!123;UBERON:0000153!2.56e-23!129;UBERON:0007811!2.56e-23!129;UBERON:0002308!1.11e-18!9;UBERON:0000125!1.11e-18!9;UBERON:0004121!1.19e-18!169;UBERON:0000924!6.78e-18!173;UBERON:0006601!6.78e-18!173;UBERON:0000956!1.40e-17!25;UBERON:0000203!1.40e-17!25;UBERON:0002619!9.79e-16!22;UBERON:0000025!3.49e-15!194;UBERON:0009663!4.77e-15!7;UBERON:0002420!5.94e-15!9;UBERON:0007245!5.94e-15!9;UBERON:0010009!5.94e-15!9;UBERON:0010011!5.94e-15!9;UBERON:0000454!5.94e-15!9;UBERON:0004732!3.15e-14!13;UBERON:0002298!1.08e-12!8;UBERON:0001950!1.23e-12!20;UBERON:0004733!2.21e-12!12;UBERON:0002028!2.21e-12!12;UBERON:0007277!2.21e-12!12;UBERON:0003076!5.86e-12!15;UBERON:0003057!5.86e-12!15;UBERON:0004111!1.85e-11!241;UBERON:0000064!7.89e-11!219;UBERON:0000477!1.06e-09!286;UBERON:0000483!1.55e-09!309;UBERON:0000119!2.67e-09!312;UBERON:0000369!4.35e-09!4;UBERON:0002435!4.35e-09!4;UBERON:0000204!4.35e-09!4;UBERON:0010082!4.35e-09!4;UBERON:0001871!1.56e-08!7;UBERON:0000200!7.20e-08!6;UBERON:0001896!1.25e-07!3;UBERON:0005290!1.25e-07!3;UBERON:0010096!1.25e-07!3;UBERON:0000475!1.55e-07!365;UBERON:0001894!1.62e-07!7;UBERON:0006222!1.62e-07!7;UBERON:0000349!1.63e-07!5;UBERON:0002680!3.00e-07!9;UBERON:0001895!3.00e-07!9;UBERON:0010092!3.00e-07!9;UBERON:0006331!3.30e-07!3;UBERON:0005383!3.37e-07!3;UBERON:0005382!3.37e-07!3;UBERON:0000988!7.77e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001875;9.55e-23;2!UBERON:0006514;9.55e-23;2!UBERON:0003112;2.91e-12;1!UBERON:0000941;2.91e-12;1!UBERON:0001785;2.91e-12;1!UBERON:0002464;2.91e-12;1!UBERON:0004904;2.91e-12;1!UBERON:0011158;2.91e-12;1!UBERON:0001021;2.91e-12;1!UBERON:0003128;2.91e-12;1!UBERON:0001703;2.91e-12;1!UBERON:0002241;2.91e-12;1!UBERON:0002420;1.66e-11;9!UBERON:0007245;1.66e-11;9!UBERON:0010009;1.66e-11;9!UBERON:0010011;1.66e-11;9!UBERON:0000454;1.66e-11;9!UBERON:0000349;1.11e-09;5!UBERON:0009663;3.67e-07;7!UBERON:0002780;4.03e-07;41!UBERON:0001890;4.03e-07;41!UBERON:0000007;5.73e-07;2!UBERON:0001876;9.27e-07;2!UBERON:0002360;9.27e-07;2!UBERON:0001954;9.27e-07;2!UBERON:0003714;9.27e-07;2!UBERON:0005162;9.27e-07;2!UBERON:0000122;9.27e-07;2!UBERON:0000094;9.27e-07;2!UBERON:0003022;9.27e-07;2!UBERON:0002421;9.27e-07;2!UBERON:0002600;9.27e-07;2!UBERON:0010743;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001875,6.84e-23,2;UBERON:0006514,6.84e-23,2;UBERON:0000941,1.75e-12,1;UBERON:0001785,1.75e-12,1;UBERON:0002464,1.75e-12,1;UBERON:0004904,1.75e-12,1;UBERON:0001021,1.75e-12,1;UBERON:0003902,1.75e-12,1;UBERON:0005425,1.75e-12,1;UBERON:0003112,1.96e-12,1;UBERON:0011158,1.96e-12,1;UBERON:0003128,1.96e-12,1;UBERON:0001703,1.96e-12,1;UBERON:0002241,1.96e-12,1;UBERON:0004761,1.96e-12,1;UBERON:0009617,1.96e-12,1;UBERON:0007023,2.77e-12,114;UBERON:0002420,1.57e-11,9;UBERON:0007245,1.57e-11,9;UBERON:0010009,1.57e-11,9;UBERON:0010011,1.57e-11,9;UBERON:0000454,1.57e-11,9;UBERON:0000349,1.38e-09,5;UBERON:0009663,3.35e-07,7;UBERON:0000007,5.73e-07,2;UBERON:0000073,5.79e-07,53;UBERON:0002616,5.79e-07,53;UBERON:0003714,7.20e-07,2;UBERON:0005162,7.20e-07,2;UBERON:0000122,7.20e-07,2;UBERON:0005253,7.61e-07,2;UBERON:0001016,9.48e-07,89 | |||
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| ||
|short_description=p2@RGS22 | |short_description=p2@RGS22 | ||
}} | }} |
Latest revision as of 19:02, 24 September 2015
Short description: | p2@RGS22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RGS22_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000523437_5end |
EntrezGene: | RGS22 |
HGNC: | 24499 |
UniProt: | A8K944 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.52e-12 | 15 |
Ontology term | p-value | n |
---|---|---|
globus pallidus | 6.84e-23 | 2 |
pallidum | 6.84e-23 | 2 |
cranial nerve II | 1.75e-12 | 1 |
cranial nerve | 1.75e-12 | 1 |
nerve trunk | 1.75e-12 | 1 |
nerve connecting eye with brain | 1.75e-12 | 1 |
nerve | 1.75e-12 | 1 |
retinal neural layer | 1.75e-12 | 1 |
presumptive neural retina | 1.75e-12 | 1 |
olfactory region | 1.96e-12 | 1 |
primary subdivision of skull | 1.96e-12 | 1 |
cranium | 1.96e-12 | 1 |
neurocranium | 1.96e-12 | 1 |
chondrocranium | 1.96e-12 | 1 |
cartilaginous neurocranium | 1.96e-12 | 1 |
head paraxial mesoderm | 1.96e-12 | 1 |
adult organism | 2.77e-12 | 114 |
basal ganglion | 1.57e-11 | 9 |
nuclear complex of neuraxis | 1.57e-11 | 9 |
aggregate regional part of brain | 1.57e-11 | 9 |
collection of basal ganglia | 1.57e-11 | 9 |
cerebral subcortex | 1.57e-11 | 9 |
limbic system | 1.38e-09 | 5 |
telencephalic nucleus | 3.35e-07 | 7 |
pituitary gland | 5.73e-07 | 2 |
regional part of nervous system | 5.79e-07 | 53 |
regional part of brain | 5.79e-07 | 53 |
neural tissue | 7.20e-07 | 2 |
multi cell component structure | 7.20e-07 | 2 |
neuron projection bundle | 7.20e-07 | 2 |
head mesenchyme | 7.61e-07 | 2 |
nervous system | 9.48e-07 | 89 |