FFCP PHASE1:Hg19::chr8:19614724..19614798,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55790 | |EntrezGene=55790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24290 | |HGNC=24290 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000522573_5end | |association_with_transcript=0bp_to_ENST00000522573_5end | ||
|cluster_id=chr8:19614724..19614798,- | |||
|description=CAGE_peak_1_at_CSGALNACT1_5end | |description=CAGE_peak_1_at_CSGALNACT1_5end | ||
|id=chr8:19614724..19614798,- | |id=chr8:19614724..19614798,- | ||
|ontology_enrichment_celltype=CL:0000791!4.31e-07!18;CL:0000789!4.31e-07!18;CL:0002420!4.31e-07!18;CL:0002419!4.31e-07!18;CL:0000790!4.31e-07!18 | |ontology_enrichment_celltype=CL:0000791!4.31e-07!18;CL:0000789!4.31e-07!18;CL:0002420!4.31e-07!18;CL:0002419!4.31e-07!18;CL:0000790!4.31e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.51e-07;18!CL:0000789;1.51e-07;18!CL:0002419;1.51e-07;18!CL:0000084;6.84e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.83e-08,18;CL:0000789,9.83e-08,18;CL:0002420,9.83e-08,18;CL:0002419,9.83e-08,18;CL:0000790,9.83e-08,18;CL:0000838,2.88e-07,52;CL:0000084,5.33e-07,25;CL:0000827,5.33e-07,25;CL:0000542,6.97e-07,53;CL:0000051,6.97e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;1.51e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.68e-26!115;UBERON:0000477!1.61e-12!286;UBERON:0001009!5.97e-11!113;UBERON:0004111!1.55e-10!241;UBERON:0004535!1.88e-10!110;UBERON:0000025!1.89e-09!194;UBERON:0003080!9.70e-09!42;UBERON:0004872!1.69e-08!84;UBERON:0002780!2.26e-08!41;UBERON:0001890!2.26e-08!41;UBERON:0006240!2.26e-08!41;UBERON:0002619!3.20e-08!22;UBERON:0001893!4.58e-08!34;UBERON:0002020!6.87e-08!34;UBERON:0003528!6.87e-08!34;UBERON:0001049!7.48e-08!57;UBERON:0005068!7.48e-08!57;UBERON:0006241!7.48e-08!57;UBERON:0007135!7.48e-08!57;UBERON:0001869!8.08e-08!32;UBERON:0001950!8.13e-08!20;UBERON:0000178!8.54e-08!15;UBERON:0000179!8.54e-08!15;UBERON:0000463!8.54e-08!15;UBERON:0002791!1.00e-07!33 | |ontology_enrichment_uberon=UBERON:0007023!2.68e-26!115;UBERON:0000477!1.61e-12!286;UBERON:0001009!5.97e-11!113;UBERON:0004111!1.55e-10!241;UBERON:0004535!1.88e-10!110;UBERON:0000025!1.89e-09!194;UBERON:0003080!9.70e-09!42;UBERON:0004872!1.69e-08!84;UBERON:0002780!2.26e-08!41;UBERON:0001890!2.26e-08!41;UBERON:0006240!2.26e-08!41;UBERON:0002619!3.20e-08!22;UBERON:0001893!4.58e-08!34;UBERON:0002020!6.87e-08!34;UBERON:0003528!6.87e-08!34;UBERON:0001049!7.48e-08!57;UBERON:0005068!7.48e-08!57;UBERON:0006241!7.48e-08!57;UBERON:0007135!7.48e-08!57;UBERON:0001869!8.08e-08!32;UBERON:0001950!8.13e-08!20;UBERON:0000178!8.54e-08!15;UBERON:0000179!8.54e-08!15;UBERON:0000463!8.54e-08!15;UBERON:0002791!1.00e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.28e-09;22!UBERON:0000178;1.28e-08;15!UBERON:0000179;1.28e-08;15!UBERON:0000463;1.28e-08;15!UBERON:0001950;1.57e-08;20!UBERON:0001869;1.89e-07;32!UBERON:0001893;2.55e-07;34!UBERON:0002791;2.63e-07;32!UBERON:0007023;2.85e-07;114!UBERON:0003528;5.07e-07;34!UBERON:0002020;5.07e-07;34!UBERON:0000956;6.25e-07;25!UBERON:0000203;6.25e-07;25!UBERON:0002780;9.17e-07;41!UBERON:0001890;9.17e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.44e-28,114;UBERON:0001009,5.47e-11,112;UBERON:0004535,1.91e-10,109;UBERON:0000025,3.11e-09,192;UBERON:0002619,4.53e-09,22;UBERON:0002780,7.83e-09,41;UBERON:0001890,7.83e-09,41;UBERON:0003080,7.83e-09,41;UBERON:0006240,7.83e-09,41;UBERON:0004111,8.84e-09,240;UBERON:0001893,9.47e-09,34;UBERON:0004872,1.25e-08,83;UBERON:0001950,1.29e-08,20;UBERON:0000178,1.37e-08,15;UBERON:0000179,1.37e-08,15;UBERON:0000463,1.37e-08,15;UBERON:0003528,1.49e-08,34;UBERON:0002020,1.49e-08,34;UBERON:0001869,1.80e-08,32;UBERON:0001049,2.45e-08,56;UBERON:0005068,2.45e-08,56;UBERON:0006241,2.45e-08,56;UBERON:0007135,2.45e-08,56;UBERON:0002791,3.10e-08,32;UBERON:0000073,1.40e-07,53;UBERON:0002616,1.40e-07,53;UBERON:0000956,5.50e-07,25;UBERON:0000203,5.50e-07,25 | |||
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|phase1_expression=0.54503513781167,0.428201047781966,2.81908808191942,1.0007329835313,3.5756887554183,0.872338524100369,2.53299878168311,0,1.30592814099919,0.245733936501509,0.697801167972428,0.218441372130172,1.05506791291381,22.6492425916885,19.8838425436749,1.34465029290355,0.602694528023977,0.730310090387373,0.975865597581014,0.123121058076788,0,0,0.286235987131057,0,0.251085279189606,0.382067028739756,0.492603536699674,0.393553906568396,0.786728553697808,1.91914699048606,1.70297735647684,0,0,0,0,0,0.880801318004542,9.41792194504192,3.40925560699241,7.59538047505481,3.13481663935894,2.59114932815184,3.8636335145128,2.61716829803216,0.755751887377619,1.69808842831471,2.32429036905685,0,3.71647645074124,1.1507695692886,1.0246428261164,1.89185783910868,2.06847408441971,0,0,2.25890807451126,1.09162460023138,2.02251136000576,2.75475503133812,1.28371610830437,3.19668562899521,0,0.997318288108159,3.40979800426155,0.870627715885752,0.56738522469114,1.24564449799115,3.26623264833766,0,1.3031330682307,2.42159801053347,1.47311054395026,0.949387162322653,0,0.425208599930087,0,3.36985893439485,3.15371474967163,0.16072558669708,0.855038231223746,0.39783335439818,0,19.3595868907455,8.7382177801941,15.1216573156804,9.38806489646316,14.0138595462604,14.3688109988621,15.8650769468367,16.2189138271012,29.0298614245819,23.4894875748376,18.349114950011,1.32171328579026,3.92355994087075,6.05783394982677,38.3584051721975,20.8295704257057,18.7097364089553,0.334372990781356,10.4295125322749,5.6813736688168,0,3.23090324967003,10.6058126690941,16.1719743046043,8.39491977671548,1.28091319725675,2.08094956095805,4.1109476150919,4.69795030235942,3.76744011455568,31.5850379535189,21.403266247177,18.8163942848958,3.39928028092699,16.8617017184845,10.9960782554442,10.1207876807801,9.875527844047,4.55758417699493,1.90090408889675,7.82990619204418,8.06315650272836,3.74792179657038,8.99753557767264,9.85353596305256,4.23374160771938,2.94184215361858,11.1514790989755,31.694892620815,10.0605128955545,2.17366355134002,11.2046137239216,8.02140657017423,12.6016471495917,6.36228757640879,26.2782829963423,0,0.221729397462564,0.175669571386252,3.86388272718252,0,0,0,0,0.26591592103773,2.8618874916641,2.85997455390064,2.22874500797739,5.36658499890104,3.4409383804245,3.12426451446835,0.56530794192401,4.19499436209906,2.75118041940067,2.92592953151535,21.4485910110543,13.8748842447817,27.1123696339383,6.8480983908555,5.32190474002959,7.32186172644509,3.67663080345869,3.24056779152704,9.01927255669206,8.53211615979445,7.43235771189927,6.13266549863533,1.89853131913626,4.946447086121,11.8602375692457,19.3890132074163,0,3.97577561356255,1.39293562831038,1.19168262731897,4.01571269048339,2.12801029319014,1.12135520028461,0,0,5.60179863719579,7.9479296521116,1.79808093424805,1.05950199351452,1.72852777344,0.468642863667593,0,1.1409436430889,0,0,0,0,5.51216262388212,0.737005903870608,9.40264608699466,33.2640800038975,26.210294503527,0,0,0.336672227908132,1.37630371859161,3.04770527032601,3.5118209670467,2.14541457059314,33.3528490772645,0.680593098960126,0.179389635688862,0.427114777637135,1.05965950579781,0,0,0.515281080091258,0.18611685633159,0.337552664482532,0.487185025805993,0.252433774244115,0.184099797284599,2.90962902273861,0,0.302256294682921,0.847802961552438,0,0,0,0,0,0,0.310983165046111,0,0.36497735907583,0,1.28648187638577,1.38134921352481,0.464367928031979,0,2.48444280083672,1.51726221070292,3.13314338848527,3.97058301836618,5.01122721412534,2.37270619111097,2.15730093056263,3.33576490713088,1.53898862778556,9.59602091012043,0,0,0,0,0,1.77236972004421,0,0.368965315629341,0.514703430895577,0,0,0,0,0,0,0,0,0.117408694235822,2.30986316417718,0.462985512576611,5.13686211033415,0,0.858486162094873,0.492434012174795,0.234004265139238,0.445893486866185,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0.829312462163088,0.432359860250884,0.12624243342638,0.126995788584338,0,0,1.71072446022705,0.205654985406647,0,0.571652865261156,0,0.43596006883328,0,0.775630294546667,0,1.690605505112,0,0,0,0,0.266422179016099,2.14466990487221,4.34097284313154,1.64648067356154,0.65147236858747,2.13235169245527,3.95975936466715,0.301439377059586,2.61460037580088,0.499864955910285,0,0,0,0.958499421966331,1.14861935834114,0,0,0,0,0.112085143993527,5.91092280605782,7.54696512008311,16.4279086438078,2.03275699377971,1.30139853857622,0,0.167516265334349,0,20.2231896465739,20.9413021442817,23.207268752418,33.9855432062017,10.5035809422532,5.42530047399471,1.66376689224646,0.713715955188647,0.315404830067869,4.09994952474496,1.50473049863859,4.5481500811197,2.0694614258501,2.65690239414175,0.553107505625109,0.173767228936166,0.195801157462741,0.343143423810856,6.6165768359324,11.2171384425681,8.64493218207899,1.5156378572313,0,4.23346410661552,0.744323423456331,0.920771839728375,0.841980283299221,4.22859192543813,4.60536524160033,2.89537058058494,1.48418066444991,0,0.177561725313127,0,8.82732529612156,0,0.725156697549733,0.802025881213139,0.276242966807689,0.114814448164607,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| ||
|short_description=p1@CSGALNACT1 | |short_description=p1@CSGALNACT1 | ||
}} | }} |
Latest revision as of 07:39, 17 September 2015
Short description: | p1@CSGALNACT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CSGALNACT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000522573_5end |
EntrezGene: | CSGALNACT1 |
HGNC: | 24290 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.83e-08 | 18 |
alpha-beta T cell | 9.83e-08 | 18 |
immature T cell | 9.83e-08 | 18 |
mature T cell | 9.83e-08 | 18 |
immature alpha-beta T cell | 9.83e-08 | 18 |
lymphoid lineage restricted progenitor cell | 2.88e-07 | 52 |
T cell | 5.33e-07 | 25 |
pro-T cell | 5.33e-07 | 25 |
lymphocyte | 6.97e-07 | 53 |
common lymphoid progenitor | 6.97e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.44e-28 | 114 |
circulatory system | 5.47e-11 | 112 |
cardiovascular system | 1.91e-10 | 109 |
tube | 3.11e-09 | 192 |
regional part of cerebral cortex | 4.53e-09 | 22 |
regional part of forebrain | 7.83e-09 | 41 |
forebrain | 7.83e-09 | 41 |
anterior neural tube | 7.83e-09 | 41 |
future forebrain | 7.83e-09 | 41 |
anatomical conduit | 8.84e-09 | 240 |
telencephalon | 9.47e-09 | 34 |
splanchnic layer of lateral plate mesoderm | 1.25e-08 | 83 |
neocortex | 1.29e-08 | 20 |
blood | 1.37e-08 | 15 |
haemolymphatic fluid | 1.37e-08 | 15 |
organism substance | 1.37e-08 | 15 |
brain grey matter | 1.49e-08 | 34 |
gray matter | 1.49e-08 | 34 |
cerebral hemisphere | 1.80e-08 | 32 |
neural tube | 2.45e-08 | 56 |
neural rod | 2.45e-08 | 56 |
future spinal cord | 2.45e-08 | 56 |
neural keel | 2.45e-08 | 56 |
regional part of telencephalon | 3.10e-08 | 32 |
regional part of nervous system | 1.40e-07 | 53 |
regional part of brain | 1.40e-07 | 53 |
cerebral cortex | 5.50e-07 | 25 |
pallium | 5.50e-07 | 25 |