FFCP PHASE1:Hg19::chr9:126131131..126131159,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=286204 | |EntrezGene=286204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18688 | |HGNC=18688 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000373629_5end | |association_with_transcript=-8bp_to_ENST00000373629_5end | ||
|cluster_id=chr9:126131131..126131159,+ | |||
|coexpression_cluster_id=C655 | |||
|description=CAGE_peak_3_at_CRB2_5end | |description=CAGE_peak_3_at_CRB2_5end | ||
|id=chr9:126131131..126131159,+ | |id=chr9:126131131..126131159,+ | ||
|ontology_enrichment_celltype=CL:0000077!1.39e-16!19;CL:0000650!8.03e-07!3;CL:1000618!8.03e-07!3;CL:1001318!8.03e-07!3;CL:0002173!8.03e-07!3;CL:1000500!8.03e-07!3 | |ontology_enrichment_celltype=CL:0000077!1.39e-16!19;CL:0000650!8.03e-07!3;CL:1000618!8.03e-07!3;CL:1001318!8.03e-07!3;CL:0002173!8.03e-07!3;CL:1000500!8.03e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000650;8.98e-37;2!CL:1000500;8.98e-37;2!CL:1000618;8.98e-37;2!CL:1001318;8.98e-37;2!CL:0002173;8.98e-37;2!CL:0000669;5.90e-19;4!CL:0000077;1.19e-15;19!CL:1000746;2.90e-11;7!CL:1000612;2.90e-11;7!CL:0002097;1.43e-10;2!CL:1000507;3.69e-08;10!CL:1000494;3.69e-08;10!CL:0000174;1.82e-07;3!CL:0002586;2.97e-07;3!CL:0002681;6.07e-07;12!CL:0002584;6.07e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,9.84e-37,2;CL:1000500,9.84e-37,2;CL:1000618,9.84e-37,2;CL:1001318,9.84e-37,2;CL:0002173,9.84e-37,2;CL:0000669,6.18e-19,4;CL:0000077,1.29e-15,19;CL:1000746,2.98e-11,7;CL:1000612,2.98e-11,7;CL:0002097,1.43e-10,2;CL:1000507,3.76e-08,10;CL:1000494,3.76e-08,10;CL:0000174,1.82e-07,3;CL:0002586,2.97e-07,3;CL:0002681,6.16e-07,12;CL:0002584,6.16e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003918;3.69e-08;10!UBERON:0007687;3.69e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003567;8.98e-37;2!UBERON:0003838;8.98e-37;2!UBERON:0003586;8.98e-37;2!UBERON:0005169;8.98e-37;2!UBERON:0002321;8.98e-37;2!UBERON:0005215;8.98e-37;2!UBERON:0002303;8.98e-37;2!UBERON:0002319;8.98e-37;2!UBERON:0003891;5.90e-19;4!UBERON:0002113;2.37e-12;24!UBERON:0011143;2.37e-12;24!UBERON:0001851;1.55e-11;15!UBERON:0000074;2.90e-11;7!UBERON:0001229;2.90e-11;7!UBERON:0000489;2.79e-10;29!UBERON:0001897;2.99e-10;2!UBERON:0010225;2.99e-10;2!UBERON:0006554;6.00e-10;30!UBERON:0001008;6.00e-10;30!UBERON:0004211;3.69e-08;10!UBERON:0009773;3.69e-08;10!UBERON:0001231;3.69e-08;10!UBERON:0004810;3.69e-08;10!UBERON:0002369;1.82e-07;3!UBERON:0001235;1.82e-07;3!UBERON:0006858;1.82e-07;3!UBERON:0001781;2.97e-07;3!UBERON:0001782;2.97e-07;3!UBERON:0005172;4.65e-07;52!UBERON:0005173;4.65e-07;52!UBERON:0001225;6.07e-07;12!UBERON:0008987;6.07e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,9.84e-37,2;UBERON:0003838,9.84e-37,2;UBERON:0003586,9.84e-37,2;UBERON:0005169,9.84e-37,2;UBERON:0002321,9.84e-37,2;UBERON:0005215,9.84e-37,2;UBERON:0002303,9.84e-37,2;UBERON:0002319,9.84e-37,2;UBERON:0003891,6.18e-19,4;UBERON:0001851,1.58e-11,15;UBERON:0002113,1.93e-11,26;UBERON:0003918,1.93e-11,26;UBERON:0011143,1.93e-11,26;UBERON:0005095,1.93e-11,26;UBERON:0007687,1.93e-11,26;UBERON:0010532,2.98e-11,7;UBERON:0000074,2.98e-11,7;UBERON:0001229,2.98e-11,7;UBERON:0001230,2.98e-11,7;UBERON:0003220,2.98e-11,7;UBERON:0005749,2.98e-11,7;UBERON:0004199,2.98e-11,7;UBERON:0004209,2.98e-11,7;UBERON:0004198,2.98e-11,7;UBERON:0001897,2.72e-10,2;UBERON:0010225,2.72e-10,2;UBERON:0005103,5.80e-10,8;UBERON:0000083,5.80e-10,8;UBERON:0009201,5.80e-10,8;UBERON:0006553,5.80e-10,8;UBERON:0003074,5.80e-10,8;UBERON:0003060,5.80e-10,8;UBERON:0000489,1.20e-09,31;UBERON:0000080,5.87e-09,9;UBERON:0002120,5.87e-09,9;UBERON:0004875,5.87e-09,9;UBERON:0005721,5.87e-09,9;UBERON:0005754,5.87e-09,9;UBERON:0007297,5.87e-09,9;UBERON:0005172,1.83e-08,54;UBERON:0005173,1.83e-08,54;UBERON:0004810,3.76e-08,10;UBERON:0002417,1.28e-07,60;UBERON:0000916,1.28e-07,60;UBERON:0004876,1.73e-07,11;UBERON:0002369,1.82e-07,3;UBERON:0001235,1.82e-07,3;UBERON:0006858,1.82e-07,3;UBERON:0001782,2.97e-07,3;UBERON:0005424,2.97e-07,3;UBERON:0001225,6.16e-07,12;UBERON:0008987,6.16e-07,12;UBERON:0003887,6.16e-07,12 | |||
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|short_description=p3@CRB2 | |short_description=p3@CRB2 | ||
}} | }} |
Latest revision as of 23:05, 24 September 2015
Short description: | p3@CRB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CRB2_5end |
Coexpression cluster: | C655_mesothelioma_Mesothelial_hepatoma_cholangiocellular_Urothelial_glioma_serous |
Association with transcript: | -8bp_to_ENST00000373629_5end |
EntrezGene: | CRB2 |
HGNC: | 18688 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 9.84e-37 | 2 |
kidney interstitial cell | 9.84e-37 | 2 |
juxtaglomerular complex cell | 9.84e-37 | 2 |
renal interstitial pericyte | 9.84e-37 | 2 |
extraglomerular mesangial cell | 9.84e-37 | 2 |
pericyte cell | 6.18e-19 | 4 |
mesothelial cell | 1.29e-15 | 19 |
glomerular cell | 2.98e-11 | 7 |
kidney corpuscule cell | 2.98e-11 | 7 |
cortical cell of adrenal gland | 1.43e-10 | 2 |
kidney tubule cell | 3.76e-08 | 10 |
nephron tubule epithelial cell | 3.76e-08 | 10 |
steroid hormone secreting cell | 1.82e-07 | 3 |
retinal pigment epithelial cell | 2.97e-07 | 3 |
kidney cortical cell | 6.16e-07 | 12 |
renal cortical epithelial cell | 6.16e-07 | 12 |