FFCP PHASE1:Hg19::chr5:71479302..71479315,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:71479302..71479315,+ | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_at_chr5:71479302..71479315,+ | |description=CAGE_peak_at_chr5:71479302..71479315,+ | ||
|id=chr5:71479302..71479315,+ | |id=chr5:71479302..71479315,+ | ||
|ontology_enrichment_celltype=CL:0002605!2.23e-13!3;CL:0000047!3.55e-13!8;CL:0002322!2.62e-12!5;CL:0002319!5.13e-11!25;CL:0000128!9.18e-10!7;CL:0000126!9.18e-10!7;CL:0000127!9.18e-10!7;CL:0002453!9.18e-10!7;CL:0000133!2.00e-08!59;CL:0000540!6.42e-07!6;CL:0000031!6.42e-07!6;CL:0000404!6.42e-07!6 | |ontology_enrichment_celltype=CL:0002605!2.23e-13!3;CL:0000047!3.55e-13!8;CL:0002322!2.62e-12!5;CL:0002319!5.13e-11!25;CL:0000128!9.18e-10!7;CL:0000126!9.18e-10!7;CL:0000127!9.18e-10!7;CL:0002453!9.18e-10!7;CL:0000133!2.00e-08!59;CL:0000540!6.42e-07!6;CL:0000031!6.42e-07!6;CL:0000404!6.42e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002605;1.04e-35;3!CL:0002319;5.00e-27;25!CL:0000047;1.22e-24;2!CL:0000540;2.55e-18;6!CL:0000404;2.55e-18;6!CL:0000128;1.04e-15;7!CL:0000126;1.04e-15;7!CL:0000127;1.04e-15;7!CL:0000243;8.77e-07;15!CL:0000125;8.77e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.18e-37,8;CL:0002605,1.11e-35,3;CL:0002319,5.08e-27,25;CL:0000540,2.47e-18,6;CL:0000031,2.47e-18,6;CL:0000404,2.47e-18,6;CL:0000128,1.07e-15,7;CL:0000126,1.07e-15,7;CL:0000127,1.07e-15,7;CL:0002453,1.07e-15,7;CL:0000133,1.64e-14,59;CL:0000221,8.91e-12,72;CL:0000243,8.85e-07,15;CL:0000125,8.85e-07,15;CL:0000030,8.85e-07,15;CL:0000339,8.85e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000031;2.55e-18;6!CL:0000133;1.85e-10;59!UBERON:0010122;5.13e-07;2!CL:0000339;8.77e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000956;1.40e-21;25!UBERON:0000203;1.40e-21;25!UBERON:0002791;2.07e-21;32!UBERON:0001869;2.50e-21;32!UBERON:0003528;1.00e-18;34!UBERON:0002020;1.00e-18;34!UBERON:0001893;1.33e-18;34!UBERON:0002780;1.49e-15;41!UBERON:0001890;1.49e-15;41!UBERON:0000955;2.28e-10;68!UBERON:0002021;2.41e-10;5!UBERON:0000073;2.07e-09;53!UBERON:0002616;2.07e-09;53!UBERON:0001950;2.87e-09;20!UBERON:0001016;4.61e-09;83!UBERON:0001017;5.87e-09;75!UBERON:0002619;1.77e-08;22!UBERON:0001873;5.13e-07;2 | |||
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|short_description=p@chr5:71479302..71479315,+ | |short_description=p@chr5:71479302..71479315,+ | ||
}} | }} |
Latest revision as of 16:02, 30 July 2015
Short description: | p@chr5:71479302..71479315, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:71479302..71479315, + |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.18e-37 | 8 |
astrocyte of the cerebral cortex | 1.11e-35 | 3 |
neural cell | 5.08e-27 | 25 |
neuron | 2.47e-18 | 6 |
neuroblast | 2.47e-18 | 6 |
electrically signaling cell | 2.47e-18 | 6 |
oligodendrocyte | 1.07e-15 | 7 |
macroglial cell | 1.07e-15 | 7 |
astrocyte | 1.07e-15 | 7 |
oligodendrocyte precursor cell | 1.07e-15 | 7 |
neurectodermal cell | 1.64e-14 | 59 |
ectodermal cell | 8.91e-12 | 72 |
glial cell (sensu Vertebrata) | 8.85e-07 | 15 |
glial cell | 8.85e-07 | 15 |
glioblast | 8.85e-07 | 15 |
glioblast (sensu Vertebrata) | 8.85e-07 | 15 |