FFCP PHASE1:Hg19::chr8:22419319..22419327,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:22419319..22419327,+ | |||
|description=CAGE_peak_at_chr8:22419319..22419327,+ | |description=CAGE_peak_at_chr8:22419319..22419327,+ | ||
|id=chr8:22419319..22419327,+ | |id=chr8:22419319..22419327,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000313;1.46e-50;1!CL:0000159;4.32e-26;2!CL:0000650;7.14e-26;2!CL:1000500;7.14e-26;2!CL:1000618;7.14e-26;2!CL:1001318;7.14e-26;2!CL:0002173;7.14e-26;2!CL:1000507;9.44e-21;10!CL:1000494;9.44e-21;10!CL:0002564;9.45e-18;3!CL:1000449;3.15e-14;15!CL:0000669;1.13e-13;4!CL:1000497;1.09e-12;17!CL:0002518;1.09e-12;17!CL:1000746;2.18e-08;7!CL:1000612;2.18e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.46e-50,1;CL:0000159,4.32e-26,2;CL:0000650,7.14e-26,2;CL:1000500,7.14e-26,2;CL:1000618,7.14e-26,2;CL:1001318,7.14e-26,2;CL:0002173,7.14e-26,2;CL:1000507,8.54e-21,10;CL:1000494,8.54e-21,10;CL:0002564,1.12e-17,3;CL:1000449,2.94e-14,15;CL:0000669,1.13e-13,4;CL:1000497,1.03e-12,17;CL:0002518,1.03e-12,17;CL:1000746,2.18e-08,7;CL:1000612,2.18e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;1.46e-50;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.46e-50,1 | |||
|ontology_enrichment_uberon=UBERON:0000481!1.63e-07!347 | |ontology_enrichment_uberon=UBERON:0000481!1.63e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.46e-50;1!UBERON:0004909;4.32e-26;2!UBERON:0003567;7.14e-26;2!UBERON:0003838;7.14e-26;2!UBERON:0003586;7.14e-26;2!UBERON:0005169;7.14e-26;2!UBERON:0002321;7.14e-26;2!UBERON:0005215;7.14e-26;2!UBERON:0002303;7.14e-26;2!UBERON:0002319;7.14e-26;2!UBERON:0004211;9.44e-21;10!UBERON:0009773;9.44e-21;10!UBERON:0001231;9.44e-21;10!UBERON:0004810;9.44e-21;10!UBERON:0002242;9.45e-18;3!UBERON:0006555;3.15e-14;15!UBERON:0004819;3.15e-14;15!UBERON:0001285;3.15e-14;15!UBERON:0007684;3.15e-14;15!UBERON:0003891;1.13e-13;4!UBERON:0011135;3.26e-11;5!UBERON:0002216;3.26e-11;5!UBERON:0011134;3.26e-11;5!UBERON:0002209;3.26e-11;5!UBERON:0002213;3.26e-11;5!UBERON:0007844;3.26e-11;5!UBERON:0011138;3.26e-11;5!UBERON:0001130;3.26e-11;5!UBERON:0001066;3.26e-11;5!UBERON:0001468;3.26e-11;5!UBERON:0002113;2.67e-09;24!UBERON:0011143;2.67e-09;24!UBERON:0000074;2.18e-08;7!UBERON:0001229;2.18e-08;7!UBERON:0000489;7.15e-08;29!UBERON:0006554;1.21e-07;30!UBERON:0001008;1.21e-07;30!UBERON:0004905;1.69e-07;8!UBERON:0000982;1.69e-07;8!UBERON:0004770;1.69e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.46e-50,1;UBERON:0004909,4.32e-26,2;UBERON:0003567,7.14e-26,2;UBERON:0003838,7.14e-26,2;UBERON:0003586,7.14e-26,2;UBERON:0005169,7.14e-26,2;UBERON:0002321,7.14e-26,2;UBERON:0005215,7.14e-26,2;UBERON:0002303,7.14e-26,2;UBERON:0002319,7.14e-26,2;UBERON:0004810,8.54e-21,10;UBERON:0002242,1.12e-17,3;UBERON:0003068,1.12e-17,3;UBERON:0002328,1.12e-17,3;UBERON:0004880,1.12e-17,3;UBERON:0004211,2.94e-14,15;UBERON:0009773,2.94e-14,15;UBERON:0001231,2.94e-14,15;UBERON:0001285,2.94e-14,15;UBERON:0007684,2.94e-14,15;UBERON:0004208,2.94e-14,15;UBERON:0003891,1.13e-13,4;UBERON:0006555,1.95e-13,16;UBERON:0004819,1.95e-13,16;UBERON:0011135,3.60e-11,5;UBERON:0002216,3.60e-11,5;UBERON:0011134,3.60e-11,5;UBERON:0002209,3.60e-11,5;UBERON:0002213,3.60e-11,5;UBERON:0005856,3.60e-11,5;UBERON:0005866,3.60e-11,5;UBERON:0005863,3.60e-11,5;UBERON:0007844,3.60e-11,5;UBERON:0011138,3.60e-11,5;UBERON:0001130,3.60e-11,5;UBERON:0001066,3.60e-11,5;UBERON:0001468,3.60e-11,5;UBERON:0002113,1.11e-08,26;UBERON:0003918,1.11e-08,26;UBERON:0011143,1.11e-08,26;UBERON:0005095,1.11e-08,26;UBERON:0007687,1.11e-08,26;UBERON:0010532,2.18e-08,7;UBERON:0000074,2.18e-08,7;UBERON:0001229,2.18e-08,7;UBERON:0001230,2.18e-08,7;UBERON:0003220,2.18e-08,7;UBERON:0005749,2.18e-08,7;UBERON:0004199,2.18e-08,7;UBERON:0004209,2.18e-08,7;UBERON:0004198,2.18e-08,7;UBERON:0005103,1.69e-07,8;UBERON:0000083,1.69e-07,8;UBERON:0009201,1.69e-07,8;UBERON:0006553,1.69e-07,8;UBERON:0003074,1.69e-07,8;UBERON:0003060,1.69e-07,8;UBERON:0004905,1.80e-07,8;UBERON:0000982,1.80e-07,8;UBERON:0004770,1.80e-07,8;UBERON:0000489,1.92e-07,31;UBERON:0000080,8.37e-07,9;UBERON:0002120,8.37e-07,9;UBERON:0004875,8.37e-07,9;UBERON:0005721,8.37e-07,9;UBERON:0005754,8.37e-07,9;UBERON:0007297,8.37e-07,9 | |||
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| ||
|short_description=p@chr8:22419319..22419327,+ | |short_description=p@chr8:22419319..22419327,+ | ||
}} | }} |
Latest revision as of 16:56, 31 July 2015
Short description: | p@chr8:22419319..22419327, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:22419319..22419327, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.46e-50 | 1 |
seromucus secreting cell | 4.32e-26 | 2 |
mesangial cell | 7.14e-26 | 2 |
kidney interstitial cell | 7.14e-26 | 2 |
juxtaglomerular complex cell | 7.14e-26 | 2 |
renal interstitial pericyte | 7.14e-26 | 2 |
extraglomerular mesangial cell | 7.14e-26 | 2 |
kidney tubule cell | 8.54e-21 | 10 |
nephron tubule epithelial cell | 8.54e-21 | 10 |
nucleus pulposus cell of intervertebral disc | 1.12e-17 | 3 |
epithelial cell of nephron | 2.94e-14 | 15 |
pericyte cell | 1.13e-13 | 4 |
kidney cell | 1.03e-12 | 17 |
kidney epithelial cell | 1.03e-12 | 17 |
glomerular cell | 2.18e-08 | 7 |
kidney corpuscule cell | 2.18e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.46e-50 | 1 |