FFCP PHASE1:Hg19::chr10:67330266..67330300,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:67330266..67330300,+ | |||
|description=CAGE_peak_at_chr10:67330266..67330300,+ | |description=CAGE_peak_at_chr10:67330266..67330300,+ | ||
|id=chr10:67330266..67330300,+ | |id=chr10:67330266..67330300,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.35e-08!254 | |ontology_enrichment_celltype=CL:0000066!3.35e-08!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.75e-07!143 | |ontology_enrichment_disease=DOID:0050687!3.75e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.16e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000481!5.23e-14!347;UBERON:0002346!3.47e-12!90;UBERON:0000924!3.69e-12!173;UBERON:0006601!3.69e-12!173;UBERON:0003075!7.57e-12!86;UBERON:0007284!7.57e-12!86;UBERON:0004121!9.00e-12!169;UBERON:0000475!4.53e-11!365;UBERON:0005743!7.24e-11!86;UBERON:0000073!8.99e-11!94;UBERON:0001016!8.99e-11!94;UBERON:0001017!1.03e-10!82;UBERON:0001049!1.48e-10!57;UBERON:0005068!1.48e-10!57;UBERON:0006241!1.48e-10!57;UBERON:0007135!1.48e-10!57;UBERON:0000119!4.38e-10!312;UBERON:0000483!8.27e-10!309;UBERON:0002616!8.51e-10!59;UBERON:0007023!4.26e-09!115;UBERON:0000955!5.28e-09!69;UBERON:0006238!5.28e-09!69;UBERON:0000062!6.47e-09!511;UBERON:0000033!1.36e-08!123;UBERON:0000153!1.38e-08!129;UBERON:0007811!1.38e-08!129;UBERON:0002780!1.83e-08!41;UBERON:0001890!1.83e-08!41;UBERON:0006240!1.83e-08!41;UBERON:0003056!4.22e-08!61;UBERON:0003080!7.36e-08!42;UBERON:0000468!8.20e-08!659;UBERON:0000064!3.98e-07!219;UBERON:0000922!4.93e-07!612;UBERON:0000477!6.18e-07!286 | |ontology_enrichment_uberon=UBERON:0000481!5.23e-14!347;UBERON:0002346!3.47e-12!90;UBERON:0000924!3.69e-12!173;UBERON:0006601!3.69e-12!173;UBERON:0003075!7.57e-12!86;UBERON:0007284!7.57e-12!86;UBERON:0004121!9.00e-12!169;UBERON:0000475!4.53e-11!365;UBERON:0005743!7.24e-11!86;UBERON:0000073!8.99e-11!94;UBERON:0001016!8.99e-11!94;UBERON:0001017!1.03e-10!82;UBERON:0001049!1.48e-10!57;UBERON:0005068!1.48e-10!57;UBERON:0006241!1.48e-10!57;UBERON:0007135!1.48e-10!57;UBERON:0000119!4.38e-10!312;UBERON:0000483!8.27e-10!309;UBERON:0002616!8.51e-10!59;UBERON:0007023!4.26e-09!115;UBERON:0000955!5.28e-09!69;UBERON:0006238!5.28e-09!69;UBERON:0000062!6.47e-09!511;UBERON:0000033!1.36e-08!123;UBERON:0000153!1.38e-08!129;UBERON:0007811!1.38e-08!129;UBERON:0002780!1.83e-08!41;UBERON:0001890!1.83e-08!41;UBERON:0006240!1.83e-08!41;UBERON:0003056!4.22e-08!61;UBERON:0003080!7.36e-08!42;UBERON:0000468!8.20e-08!659;UBERON:0000064!3.98e-07!219;UBERON:0000922!4.93e-07!612;UBERON:0000477!6.18e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.64e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.87e-14,223;UBERON:0002346,2.61e-11,86;UBERON:0003075,7.33e-11,82;UBERON:0007284,7.33e-11,82;UBERON:0001017,1.25e-10,81;UBERON:0004121,1.52e-10,171;UBERON:0000924,1.52e-10,171;UBERON:0006601,1.52e-10,171;UBERON:0001016,1.64e-10,89;UBERON:0001049,1.80e-10,56;UBERON:0005068,1.80e-10,56;UBERON:0006241,1.80e-10,56;UBERON:0007135,1.80e-10,56;UBERON:0000073,3.12e-09,53;UBERON:0002616,3.12e-09,53;UBERON:0010371,3.20e-09,104;UBERON:0000955,9.69e-09,68;UBERON:0006238,9.69e-09,68;UBERON:0010314,1.86e-08,132;UBERON:0003056,2.32e-08,61;UBERON:0007023,5.39e-08,114;UBERON:0002780,6.71e-08,41;UBERON:0001890,6.71e-08,41;UBERON:0003080,6.71e-08,41;UBERON:0006240,6.71e-08,41;UBERON:0000119,1.67e-07,309;UBERON:0000483,2.93e-07,306 | |||
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| ||
|short_description=p@chr10:67330266..67330300,+ | |short_description=p@chr10:67330266..67330300,+ | ||
}} | }} |
Latest revision as of 14:50, 23 July 2015
Short description: | p@chr10:67330266..67330300, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:67330266..67330300, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 2.87e-14 | 223 |
neurectoderm | 2.61e-11 | 86 |
neural plate | 7.33e-11 | 82 |
presumptive neural plate | 7.33e-11 | 82 |
central nervous system | 1.25e-10 | 81 |
ectoderm-derived structure | 1.52e-10 | 171 |
ectoderm | 1.52e-10 | 171 |
presumptive ectoderm | 1.52e-10 | 171 |
nervous system | 1.64e-10 | 89 |
neural tube | 1.80e-10 | 56 |
neural rod | 1.80e-10 | 56 |
future spinal cord | 1.80e-10 | 56 |
neural keel | 1.80e-10 | 56 |
regional part of nervous system | 3.12e-09 | 53 |
regional part of brain | 3.12e-09 | 53 |
ecto-epithelium | 3.20e-09 | 104 |
brain | 9.69e-09 | 68 |
future brain | 9.69e-09 | 68 |
structure with developmental contribution from neural crest | 1.86e-08 | 132 |
pre-chordal neural plate | 2.32e-08 | 61 |
adult organism | 5.39e-08 | 114 |
regional part of forebrain | 6.71e-08 | 41 |
forebrain | 6.71e-08 | 41 |
anterior neural tube | 6.71e-08 | 41 |
future forebrain | 6.71e-08 | 41 |
cell layer | 1.67e-07 | 309 |
epithelium | 2.93e-07 | 306 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.16e-07 | 143 |