FFCP PHASE1:Hg19::chr11:30166055..30166059,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:30166055..30166059,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr11:30166055..30166059,- | |description=CAGE_peak_at_chr11:30166055..30166059,- | ||
|id=chr11:30166055..30166059,- | |id=chr11:30166055..30166059,- | ||
|ontology_enrichment_celltype=CL:0002557!8.24e-10!1;CL:0000667!7.69e-07!6;CL:0000058!7.69e-07!6;CL:0000138!7.69e-07!6;CL:0000540!8.15e-07!6;CL:0000031!8.15e-07!6;CL:0000404!8.15e-07!6 | |ontology_enrichment_celltype=CL:0002557!8.24e-10!1;CL:0000667!7.69e-07!6;CL:0000058!7.69e-07!6;CL:0000138!7.69e-07!6;CL:0000540!8.15e-07!6;CL:0000031!8.15e-07!6;CL:0000404!8.15e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000138;7.67e-18;6!CL:0000153;2.19e-12;9!CL:0000447;2.19e-12;9!CL:0000327;5.55e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.67e-18,6;CL:0000138,7.67e-18,6;CL:0000153,2.19e-12,9;CL:0000447,2.19e-12,9;CL:0000327,5.55e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.55e-98;1!UBERON:0003056;5.96e-34;3 | |||
|ontology_enrichment_disease=DOID:3371!1.65e-10!1;DOID:4549!1.65e-10!1;DOID:5861!1.65e-10!1;DOID:6496!1.65e-10!1;DOID:12603!4.06e-10!1 | |ontology_enrichment_disease=DOID:3371!1.65e-10!1;DOID:4549!1.65e-10!1;DOID:5861!1.65e-10!1;DOID:6496!1.65e-10!1;DOID:12603!4.06e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:3371;9.37e-99;1!DOID:4549;9.37e-99;1!DOID:5861;9.37e-99;1!DOID:6496;9.37e-99;1!DOID:201;7.67e-18;6!DOID:0060100;7.67e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.37e-99,1;DOID:4549,9.37e-99,1;DOID:5861,9.37e-99,1;DOID:6496,9.37e-99,1;DOID:201,7.67e-18,6;DOID:0060100,7.67e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0006947!5.51e-13!3;UBERON:0004054!5.51e-13!3;UBERON:0006331!2.12e-12!3;UBERON:0000941!1.80e-10!1;UBERON:0004904!1.80e-10!1;UBERON:0002464!1.80e-10!1;UBERON:0001021!1.80e-10!1;UBERON:0001785!1.80e-10!1;UBERON:0001000!1.98e-10!1;UBERON:0005352!1.98e-10!1;UBERON:0000998!2.59e-10!1;UBERON:0006868!2.59e-10!1;UBERON:0002298!3.73e-10!8;UBERON:0002038!5.79e-10!1;UBERON:0009661!5.79e-10!1;UBERON:0005904!5.81e-10!4;UBERON:0002022!1.17e-09!1;UBERON:0002420!3.92e-09!9;UBERON:0007245!3.92e-09!9;UBERON:0010009!3.92e-09!9;UBERON:0010011!3.92e-09!9;UBERON:0000454!3.92e-09!9;UBERON:0002308!4.03e-09!9;UBERON:0000125!4.03e-09!9;UBERON:0000073!2.53e-07!94;UBERON:0001016!2.53e-07!94;UBERON:0007023!2.61e-07!115;UBERON:0001017!5.87e-07!82 | |ontology_enrichment_uberon=UBERON:0006947!5.51e-13!3;UBERON:0004054!5.51e-13!3;UBERON:0006331!2.12e-12!3;UBERON:0000941!1.80e-10!1;UBERON:0004904!1.80e-10!1;UBERON:0002464!1.80e-10!1;UBERON:0001021!1.80e-10!1;UBERON:0001785!1.80e-10!1;UBERON:0001000!1.98e-10!1;UBERON:0005352!1.98e-10!1;UBERON:0000998!2.59e-10!1;UBERON:0006868!2.59e-10!1;UBERON:0002298!3.73e-10!8;UBERON:0002038!5.79e-10!1;UBERON:0009661!5.79e-10!1;UBERON:0005904!5.81e-10!4;UBERON:0002022!1.17e-09!1;UBERON:0002420!3.92e-09!9;UBERON:0007245!3.92e-09!9;UBERON:0010009!3.92e-09!9;UBERON:0010011!3.92e-09!9;UBERON:0000454!3.92e-09!9;UBERON:0002308!4.03e-09!9;UBERON:0000125!4.03e-09!9;UBERON:0000073!2.53e-07!94;UBERON:0001016!2.53e-07!94;UBERON:0007023!2.61e-07!115;UBERON:0001017!5.87e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.55e-98;1!UBERON:0001785;2.55e-98;1!UBERON:0002464;2.55e-98;1!UBERON:0004904;2.55e-98;1!UBERON:0001021;2.55e-98;1!UBERON:0003714;4.52e-50;2!UBERON:0005162;4.52e-50;2!UBERON:0000122;4.52e-50;2!UBERON:0002418;4.27e-34;3!UBERON:0004755;4.27e-34;3!UBERON:0000010;2.45e-12;8!UBERON:0004732;5.70e-09;13!UBERON:0001474;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.55e-98,1;UBERON:0001785,2.55e-98,1;UBERON:0002464,2.55e-98,1;UBERON:0004904,2.55e-98,1;UBERON:0001021,2.55e-98,1;UBERON:0003902,2.55e-98,1;UBERON:0005425,2.55e-98,1;UBERON:0003714,4.52e-50,2;UBERON:0005162,4.52e-50,2;UBERON:0000122,4.52e-50,2;UBERON:0002418,4.27e-34,3;UBERON:0004755,4.27e-34,3;UBERON:0001781,7.14e-26,4;UBERON:0000966,9.07e-18,6;UBERON:0005388,9.07e-18,6;UBERON:0001802,9.07e-18,6;UBERON:0000010,2.45e-12,8;UBERON:0004732,5.70e-09,13 | |||
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|short_description=p@chr11:30166055..30166059,- | |short_description=p@chr11:30166055..30166059,- | ||
}} | }} |
Latest revision as of 21:24, 23 July 2015
Short description: | p@chr11:30166055..30166059, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:30166055..30166059, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.67e-18 | 6 |
chondrocyte | 7.67e-18 | 6 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.55e-98 | 1 |
cranial nerve | 2.55e-98 | 1 |
nerve trunk | 2.55e-98 | 1 |
nerve connecting eye with brain | 2.55e-98 | 1 |
nerve | 2.55e-98 | 1 |
retinal neural layer | 2.55e-98 | 1 |
presumptive neural retina | 2.55e-98 | 1 |
neural tissue | 4.52e-50 | 2 |
multi cell component structure | 4.52e-50 | 2 |
neuron projection bundle | 4.52e-50 | 2 |
cartilage tissue | 4.27e-34 | 3 |
skeletal tissue | 4.27e-34 | 3 |
layer of retina | 7.14e-26 | 4 |
retina | 9.07e-18 | 6 |
photoreceptor array | 9.07e-18 | 6 |
posterior segment of eyeball | 9.07e-18 | 6 |
peripheral nervous system | 2.45e-12 | 8 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.37e-99 | 1 |
extraosseous chondrosarcoma | 9.37e-99 | 1 |
myxoid chondrosarcoma | 9.37e-99 | 1 |
extraskeletal myxoid chondrosarcoma | 9.37e-99 | 1 |
connective tissue cancer | 7.67e-18 | 6 |
musculoskeletal system cancer | 7.67e-18 | 6 |