FFCP PHASE1:Hg19::chrX:64887595..64887637,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4478 | |EntrezGene=4478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7373 | |HGNC=7373 | ||
|TSSclassifier=strong | |||
|UniProt=P26038 | |UniProt=P26038 | ||
|association_with_transcript=58bp_to_ENST00000360270_5end | |association_with_transcript=58bp_to_ENST00000360270_5end | ||
|cluster_id=chrX:64887595..64887637,+ | |||
|description=CAGE_peak_3_at_MSN_5end | |description=CAGE_peak_3_at_MSN_5end | ||
|id=chrX:64887595..64887637,+ | |id=chrX:64887595..64887637,+ | ||
|ontology_enrichment_celltype=CL:0000738!6.85e-42!140;CL:0000037!9.38e-41!172;CL:0000566!9.38e-41!172;CL:0002032!3.77e-40!165;CL:0000837!3.77e-40!165;CL:0000988!1.29e-39!182;CL:0002087!3.30e-36!119;CL:0002031!7.19e-35!124;CL:0000766!6.90e-27!76;CL:0000763!4.10e-24!112;CL:0000049!4.10e-24!112;CL:0000860!4.94e-22!45;CL:0002057!6.29e-22!42;CL:0000048!1.64e-21!430;CL:0000723!9.15e-21!436;CL:0000557!1.32e-20!71;CL:0000839!3.29e-20!70;CL:0000034!4.39e-20!444;CL:0002194!1.40e-19!63;CL:0000576!1.40e-19!63;CL:0000040!1.40e-19!63;CL:0000559!1.40e-19!63;CL:0002009!3.22e-19!65;CL:0000134!1.24e-18!358;CL:0002371!1.78e-17!591;CL:0002320!5.89e-17!365;CL:0000542!1.61e-14!53;CL:0000051!1.61e-14!53;CL:0000838!1.80e-14!52;CL:0000144!4.72e-14!625;CL:0000219!7.19e-14!390;CL:0000003!2.92e-12!722;CL:0002139!8.21e-11!24;CL:0000084!1.73e-09!25;CL:0000827!1.73e-09!25;CL:0000115!3.63e-09!35;CL:0000791!8.20e-09!18;CL:0000789!8.20e-09!18;CL:0002420!8.20e-09!18;CL:0002419!8.20e-09!18;CL:0000790!8.20e-09!18;CL:0000071!2.06e-08!18;CL:0002546!2.06e-08!18;CL:0000063!8.08e-08!578;CL:0000012!1.26e-07!682;CL:0000548!3.12e-07!679;CL:0000004!3.12e-07!679;CL:0000255!3.12e-07!679;CL:0002078!3.41e-07!44 | |ontology_enrichment_celltype=CL:0000738!6.85e-42!140;CL:0000037!9.38e-41!172;CL:0000566!9.38e-41!172;CL:0002032!3.77e-40!165;CL:0000837!3.77e-40!165;CL:0000988!1.29e-39!182;CL:0002087!3.30e-36!119;CL:0002031!7.19e-35!124;CL:0000766!6.90e-27!76;CL:0000763!4.10e-24!112;CL:0000049!4.10e-24!112;CL:0000860!4.94e-22!45;CL:0002057!6.29e-22!42;CL:0000048!1.64e-21!430;CL:0000723!9.15e-21!436;CL:0000557!1.32e-20!71;CL:0000839!3.29e-20!70;CL:0000034!4.39e-20!444;CL:0002194!1.40e-19!63;CL:0000576!1.40e-19!63;CL:0000040!1.40e-19!63;CL:0000559!1.40e-19!63;CL:0002009!3.22e-19!65;CL:0000134!1.24e-18!358;CL:0002371!1.78e-17!591;CL:0002320!5.89e-17!365;CL:0000542!1.61e-14!53;CL:0000051!1.61e-14!53;CL:0000838!1.80e-14!52;CL:0000144!4.72e-14!625;CL:0000219!7.19e-14!390;CL:0000003!2.92e-12!722;CL:0002139!8.21e-11!24;CL:0000084!1.73e-09!25;CL:0000827!1.73e-09!25;CL:0000115!3.63e-09!35;CL:0000791!8.20e-09!18;CL:0000789!8.20e-09!18;CL:0002420!8.20e-09!18;CL:0002419!8.20e-09!18;CL:0000790!8.20e-09!18;CL:0000071!2.06e-08!18;CL:0002546!2.06e-08!18;CL:0000063!8.08e-08!578;CL:0000012!1.26e-07!682;CL:0000548!3.12e-07!679;CL:0000004!3.12e-07!679;CL:0000255!3.12e-07!679;CL:0002078!3.41e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.48e-16;33!CL:0002057;4.48e-16;33!CL:0000576;1.08e-14;48!CL:0000473;1.58e-13;39!CL:0000234;1.58e-13;39!CL:0000766;3.25e-13;69!CL:0002087;6.99e-12;104!CL:0002139;8.45e-11;24!CL:0000084;1.00e-09;25!CL:0000738;2.11e-09;136!CL:0000542;3.71e-09;53!CL:0000763;3.82e-09;100!CL:0000791;4.84e-09;18!CL:0000789;4.84e-09;18!CL:0002419;4.84e-09;18!CL:0000115;2.05e-08;36!CL:0000071;2.31e-08;18!CL:0000988;5.88e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.13e-41,136;CL:0000037,1.54e-40,168;CL:0002032,5.97e-40,161;CL:0000837,5.97e-40,161;CL:0000988,7.92e-39,177;CL:0002087,5.18e-36,115;CL:0002031,1.55e-34,120;CL:0000766,8.61e-27,72;CL:0000763,6.85e-24,108;CL:0000049,6.85e-24,108;CL:0000860,4.57e-22,42;CL:0002057,4.57e-22,42;CL:0000473,2.20e-21,48;CL:0000234,2.20e-21,48;CL:0000557,1.69e-20,67;CL:0000048,3.07e-20,427;CL:0000839,6.70e-20,66;CL:0000723,1.27e-19,433;CL:0002194,2.12e-19,59;CL:0000576,2.12e-19,59;CL:0000040,2.12e-19,59;CL:0000559,2.12e-19,59;CL:0002009,5.19e-19,61;CL:0000034,5.88e-19,441;CL:0000134,7.30e-18,354;CL:0002320,5.65e-16,361;CL:0000542,1.31e-14,53;CL:0000051,1.31e-14,53;CL:0000838,1.47e-14,52;CL:0000219,1.85e-13,386;CL:0002139,7.10e-11,24;CL:0000084,1.53e-09,25;CL:0000827,1.53e-09,25;CL:0000115,1.72e-09,36;CL:0000791,7.31e-09,18;CL:0000789,7.31e-09,18;CL:0002420,7.31e-09,18;CL:0002419,7.31e-09,18;CL:0000790,7.31e-09,18;CL:0000071,1.85e-08,18;CL:0002546,1.85e-08,18;CL:0002078,2.46e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002057;2.79e-16;42!CL:0000051;3.71e-09;53!CL:0000790;4.84e-09;18!CL:0002546;2.31e-08;18!CL:0000049;1.30e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.25e-28!112;UBERON:0003081!4.29e-27!216;UBERON:0002390!8.28e-26!102;UBERON:0003061!8.28e-26!102;UBERON:0002371!3.44e-18!80;UBERON:0001474!7.08e-17!86;UBERON:0002405!1.18e-16!115;UBERON:0002384!8.50e-16!375;UBERON:0001009!6.41e-14!113;UBERON:0004535!7.22e-14!110;UBERON:0004765!7.39e-14!101;UBERON:0001434!7.39e-14!101;UBERON:0000055!1.83e-13!69;UBERON:0001981!8.29e-12!60;UBERON:0007500!8.29e-12!60;UBERON:0004537!8.29e-12!60;UBERON:0006965!8.29e-12!60;UBERON:0002204!1.08e-11!167;UBERON:0002049!3.36e-11!79;UBERON:0007798!3.36e-11!79;UBERON:0004872!1.29e-08!84;UBERON:0001637!2.06e-08!42;UBERON:0003509!2.06e-08!42;UBERON:0004572!2.06e-08!42;UBERON:0001986!2.06e-08!18;UBERON:0004638!2.06e-08!18;UBERON:0004852!2.06e-08!18 | |ontology_enrichment_uberon=UBERON:0002193!1.25e-28!112;UBERON:0003081!4.29e-27!216;UBERON:0002390!8.28e-26!102;UBERON:0003061!8.28e-26!102;UBERON:0002371!3.44e-18!80;UBERON:0001474!7.08e-17!86;UBERON:0002405!1.18e-16!115;UBERON:0002384!8.50e-16!375;UBERON:0001009!6.41e-14!113;UBERON:0004535!7.22e-14!110;UBERON:0004765!7.39e-14!101;UBERON:0001434!7.39e-14!101;UBERON:0000055!1.83e-13!69;UBERON:0001981!8.29e-12!60;UBERON:0007500!8.29e-12!60;UBERON:0004537!8.29e-12!60;UBERON:0006965!8.29e-12!60;UBERON:0002204!1.08e-11!167;UBERON:0002049!3.36e-11!79;UBERON:0007798!3.36e-11!79;UBERON:0004872!1.29e-08!84;UBERON:0001637!2.06e-08!42;UBERON:0003509!2.06e-08!42;UBERON:0004572!2.06e-08!42;UBERON:0001986!2.06e-08!18;UBERON:0004638!2.06e-08!18;UBERON:0004852!2.06e-08!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.31e-08;18!UBERON:0001986;2.31e-08;18!UBERON:0004852;2.31e-08;18!UBERON:0000055;1.87e-07;65!UBERON:0007500;3.92e-07;56!UBERON:0001981;3.92e-07;56!UBERON:0004537;3.92e-07;56!UBERON:0001637;8.54e-07;42!UBERON:0003509;8.54e-07;42!UBERON:0004572;8.54e-07;42 | |||
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| ||
|short_description=p3@MSN | |short_description=p3@MSN | ||
}} | }} |
Latest revision as of 04:18, 16 September 2015
Short description: | p3@MSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MSN_5end |
Coexpression cluster: | NA |
Association with transcript: | 58bp_to_ENST00000360270_5end |
EntrezGene: | MSN |
HGNC: | 7373 |
UniProt: | P26038 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.73e-28 | 108 |
lateral plate mesoderm | 6.48e-27 | 203 |
hematopoietic system | 1.81e-25 | 98 |
blood island | 1.81e-25 | 98 |
immune system | 1.20e-22 | 93 |
bone marrow | 8.06e-18 | 76 |
bone element | 2.31e-16 | 82 |
connective tissue | 7.27e-15 | 371 |
skeletal element | 2.27e-14 | 90 |
circulatory system | 6.98e-14 | 112 |
cardiovascular system | 7.85e-14 | 109 |
vessel | 1.59e-13 | 68 |
skeletal system | 4.70e-12 | 100 |
epithelial tube open at both ends | 7.36e-12 | 59 |
blood vessel | 7.36e-12 | 59 |
blood vasculature | 7.36e-12 | 59 |
vascular cord | 7.36e-12 | 59 |
vasculature | 3.17e-11 | 78 |
vascular system | 3.17e-11 | 78 |
musculoskeletal system | 4.34e-10 | 167 |
mesoderm | 4.82e-10 | 315 |
mesoderm-derived structure | 4.82e-10 | 315 |
presumptive mesoderm | 4.82e-10 | 315 |
splanchnic layer of lateral plate mesoderm | 1.20e-08 | 83 |
artery | 1.85e-08 | 42 |
arterial blood vessel | 1.85e-08 | 42 |
arterial system | 1.85e-08 | 42 |
blood vessel endothelium | 1.85e-08 | 18 |
endothelium | 1.85e-08 | 18 |
cardiovascular system endothelium | 1.85e-08 | 18 |
simple squamous epithelium | 9.62e-07 | 22 |