FFCP PHASE1:Hg19::chr17:38465441..38465481,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:38465441..38465481,+
|short_description=p6@RARA
|description=CAGE_peak_6_at_RARA_5end
|association_with_transcript=0bp_to_uc002huk.1_5end
|EntrezGene=591...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5914 | |EntrezGene=5914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9864 | |HGNC=9864 | ||
|TSSclassifier=strong | |||
|UniProt=P10276 | |UniProt=P10276 | ||
|association_with_transcript=0bp_to_uc002huk.1_5end | |||
|cluster_id=chr17:38465441..38465481,+ | |||
|description=CAGE_peak_6_at_RARA_5end | |||
|id=chr17:38465441..38465481,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;4.70e-07;5!CL:0000163;4.98e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000163,4.13e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!8.42e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;1.51e-09;10!DOID:169;4.31e-08;6!DOID:3095;1.27e-07;22!DOID:2994;1.27e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.82e-09,10;DOID:169,4.36e-08,6;DOID:3095,1.88e-07,22;DOID:2994,1.88e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.71e-21!90;UBERON:0000073!2.89e-21!94;UBERON:0001016!2.89e-21!94;UBERON:0003075!5.31e-20!86;UBERON:0007284!5.31e-20!86;UBERON:0005743!6.08e-20!86;UBERON:0003056!6.42e-20!61;UBERON:0001049!4.50e-19!57;UBERON:0005068!4.50e-19!57;UBERON:0006241!4.50e-19!57;UBERON:0007135!4.50e-19!57;UBERON:0001017!8.20e-18!82;UBERON:0003080!1.04e-17!42;UBERON:0002780!1.20e-17!41;UBERON:0001890!1.20e-17!41;UBERON:0006240!1.20e-17!41;UBERON:0000924!2.71e-17!173;UBERON:0006601!2.71e-17!173;UBERON:0002616!2.76e-16!59;UBERON:0004121!4.83e-16!169;UBERON:0007023!7.22e-16!115;UBERON:0000955!2.05e-15!69;UBERON:0006238!2.05e-15!69;UBERON:0001869!3.86e-15!32;UBERON:0001893!5.01e-15!34;UBERON:0002791!1.76e-14!33;UBERON:0002020!2.12e-14!34;UBERON:0003528!2.12e-14!34;UBERON:0000033!6.98e-14!123;UBERON:0000064!1.36e-13!219;UBERON:0000153!1.45e-13!129;UBERON:0007811!1.45e-13!129;UBERON:0002619!1.62e-13!22;UBERON:0001950!4.11e-13!20;UBERON:0000956!5.55e-13!25;UBERON:0000203!5.55e-13!25;UBERON:0000475!2.82e-09!365;UBERON:0000481!5.55e-09!347;UBERON:0000922!3.36e-08!612;UBERON:0000468!7.36e-08!659;UBERON:0002050!6.56e-07!605;UBERON:0005423!6.56e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.80e-20;20!UBERON:0002619;1.62e-19;22!UBERON:0000956;2.40e-16;25!UBERON:0000203;2.40e-16;25!UBERON:0001869;3.14e-15;32!UBERON:0002791;1.11e-13;32!UBERON:0001893;1.48e-13;34!UBERON:0002780;1.75e-13;41!UBERON:0001890;1.75e-13;41!UBERON:0003528;2.23e-12;34!UBERON:0002020;2.23e-12;34!UBERON:0000073;1.99e-10;53!UBERON:0002616;1.99e-10;53!UBERON:0001016;4.05e-08;83!UBERON:0001017;4.41e-08;75!UBERON:0000955;7.22e-08;68!UBERON:0000200;1.85e-07;6!UBERON:0001871;3.00e-07;6!UBERON:0000013;4.70e-07;5!UBERON:0002410;4.70e-07;5!UBERON:0000922;5.21e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,4.30e-22,61;UBERON:0002346,9.25e-21,86;UBERON:0001950,1.22e-20,20;UBERON:0002619,5.74e-20,22;UBERON:0003075,4.99e-19,82;UBERON:0007284,4.99e-19,82;UBERON:0001016,9.08e-19,89;UBERON:0002780,2.50e-18,41;UBERON:0001890,2.50e-18,41;UBERON:0003080,2.50e-18,41;UBERON:0006240,2.50e-18,41;UBERON:0000073,4.93e-18,53;UBERON:0002616,4.93e-18,53;UBERON:0001049,1.32e-17,56;UBERON:0005068,1.32e-17,56;UBERON:0006241,1.32e-17,56;UBERON:0007135,1.32e-17,56;UBERON:0001869,2.49e-17,32;UBERON:0010371,3.95e-17,104;UBERON:0004121,4.42e-17,171;UBERON:0000924,4.42e-17,171;UBERON:0006601,4.42e-17,171;UBERON:0000956,9.82e-17,25;UBERON:0000203,9.82e-17,25;UBERON:0001893,8.20e-16,34;UBERON:0002791,1.03e-15,32;UBERON:0001017,1.04e-15,81;UBERON:0000955,3.74e-15,68;UBERON:0006238,3.74e-15,68;UBERON:0003528,2.57e-14,34;UBERON:0002020,2.57e-14,34;UBERON:0011216,2.77e-11,223;UBERON:0010314,5.40e-10,132;UBERON:0001871,1.16e-07,6;UBERON:0000200,1.91e-07,6;UBERON:0000013,5.17e-07,5;UBERON:0002410,5.17e-07,5;UBERON:0007023,6.61e-07,114 | |||
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| ||
|short_description=p6@RARA | |||
}} | }} |
Latest revision as of 00:39, 20 September 2015
Short description: | p6@RARA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RARA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002huk.1_5end |
EntrezGene: | RARA |
HGNC: | 9864 |
UniProt: | P10276 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endocrine cell | 4.13e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.82e-09 | 10 |
neuroendocrine tumor | 4.36e-08 | 6 |
germ cell and embryonal cancer | 1.88e-07 | 22 |
germ cell cancer | 1.88e-07 | 22 |