Coexpression cluster:C1899: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Coexpression_clusters
|full_id=C1899_Mesenchymal_Fibroblast_Urothelial_Smooth_mucinous_Pericytes_Keratocytes
|id=C1899
}}") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{Coexpression_clusters | {{Coexpression_clusters|coexpression_dpi_cluster_scores_median=0.33121550794547,0.348102302539746,0.362453579008551,0.617630672464216,0.248328970798676,0.304674276091265,0.44548334155858,0.563413344623728,0.565715623576522,0.149248307749503,0.378005383483912,0.249353384141994,0.350205837235271,0.243026813555983,0.471268384019038,0.365014267927973,0.511362993764266,0.446132517852383,0.394806461308836,0.246506352247758,0.206503265465179,0.291338635670908,0.281006423995,0.316683149880903,0.291736517683055,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.274381866674443,0.404151919210111,0.460070189972386,0.472371747616189,-0.304490646881111,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.265879043943754,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.283793453444537,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.265879043943754,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.253676102438086,0.51939857733303,0.347580527642508,0.336442407603608,0.373825188627046,0.497224646891415,-0.134262048053974,0.215636162221659,0.303394517486779,0.101547026708767,0.12750336304441,0.0289128261929948,0.497444893478465,0.452070374748239,-0.336894705459779,-0.336894705459779,-0.282680910206626,-0.336894705459779,-0.336894705459779,-0.336894705459779,0.0779397067332545,0.217073689910511,0.100174163121158,0.177031514462942,0.0909155014939847,0.00828426068977273,-0.00775024529987234,-0.0876351162498667,-0.0202909457033203,-0.140488676395184,-0.0802590565411575,-0.253676102438086,0.125827282636081,-0.152500637187357,0.152469303743969,-0.234843762917135,-0.265879043943754,-0.175393164147211,-0.265879043943754,-0.0908130022242635,-0.07565796996126,-0.336894705459779,-0.336894705459779,0.558196174321845,0.397485922177491,0.309714880638732,0.22502280132066,0.664019967923525,0.229389129557971,0.487877624125595,0.159340057247979,0.472620156466842,0.314007321856015,0.245374293336048,0.292276162539751,0.240339827478918,0.381429716668072,0.287153316263275,0.327185114067463,0.0769291329004235,0.352029041240758,-0.00532078168394284,0.0753372735541006,-0.0404132296137686,0.28412411678714,0.139155434991207,0.346427410259165,0.422925034850093,0.520500490184918,0.708859532498804,0.890434814700679,0.116779418811126,0.0390072421619432,0.00905786207966153,0.590610111736976,0.477138376051927,0.487250153981329,0.354891963054595,0.563683931520824,0.476343696400165,0.295717458313415,0.721010953937962,0.228878257076604,0.663861129724671,0.848675719757135,0.540386412668411,0.40205242511094,0.365731010278034,0.218373378136388,0.124070339820162,0.99036857376027,0.579777707870686,0.459428299840913,0.485266091558001,0.414128986772521,0.364879304312429,-0.253676102438086,-0.191515136905549,-0.20593644099054,-0.117459189761999,-0.0921322002882288,-0.336894705459779,0.15532580897006,0.705495725277534,0.30962036791407,0.202305837302004,0.577235495392308,0.108311250914097,0.201843536753134,0.134792100432412,0.153848095721196,0.190567370608408,0.0738412577997896,0.1318287115002,-0.0142685947780813,0.138781711714908,-0.0968060898105885,0.666616518926798,0.51247886456555,0.668033026985623,-0.0119303272773987,0.127167784792527,-0.0287161597713865,-0.336894705459779,-0.102391377125812,0.12358906984245,0.456776356794688,0.303790672604226,0.0485010258871498,0.254566642473153,0.148473710741589,0.762177412553137,0.0510844749625327,0.392418174930525,0.156334147149327,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.265879043943754,0.0665979484987973,-0.336894705459779,-0.336894705459779,-0.276714110973753,0.315275559176257,0.375670958953166,0.352941044264183,0.340845248147025,0.337424327346133,0.671755888369089,-0.336894705459779,-0.336894705459779,-0.255069391117537,-0.278423145709013,-0.265879043943754,-0.0755193806659132,0.149963398648161,0.0232701797652206,0.308669906658971,-0.0829555994355202,0.154803282943044,-0.227712356185801,0.272390761351532,0.24872374957498,0.332135119580739,0.094471437092408,1.47853798987504,0.669009328286953,0.616291836984158,0.87146541532476,0.585471145558389,0.64132909817753,0.586401166914429,0.445621272171909,0.774961542511436,0.341460390205701,0.539539890164469,0.521951541204378,0.0753816260701256,0.202232348689832,0.398196123267828,0.30223707599081,-0.336894705459779,-0.336894705459779,-0.336894705459779,0.174032937322567,0.461372127566419,0.319890443855396,0.378996533417429,0.459624451545974,0.423113114888875,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,0.428609774201223,0.096112789030413,0.255241567994704,0.0598629267239691,0.284563957378532,-0.336894705459779,-0.336894705459779,-0.336894705459779,0.291292129408684,0.586886879129108,0.0947392513500774,0.289138350055586,0.388803334637943,0.52782632296422,0.327407738943725,0.145084901517421,0.407253495052597,0.233386077501488,0.309437266362813,0.362723349713071,0.305417534162544,0.618193178751708,0.699578649338544,-0.336894705459779,-0.336894705459779,-0.336894705459779,0.234598455844545,0.547187625573975,0.350971393456201,0.539792693222625,0.19987823385371,0.464683359318301,0.652969196376738,0.532867524718232,0.484611436602487,0.789595369557102,0.0520731677006627,0.421074497809329,0.192238769860429,0.234453894380666,0.25475518779936,-0.029050495380588,0.648899402446548,0.143272120948208,0.476759227240982,0.578469513772097,0.702631982500745,0.23215103890116,-0.0356043452873939,0.143834263722214,0.256699744386956,-0.0545663434068213,-0.253676102438086,-0.0746183103167574,-0.0977840890992572,0.0377348381756963,0.232416499145834,0.31745786978546,0.0996297766074021,-0.0741883329914123,0.10886482569645,-0.336894705459779,-0.336894705459779,0.29435396949261,0.384436882898785,0.0299376066590716,-0.0825223730128599,0.40243263857524,0.231340651511701,0.321980889950036,0.188844305383222,0.720573482425344,0.201494370584077,0.320459330095007,0.447168606950871,0.207322884488806,0.223615937014514,0.255293978474513,0.290328941663345,0.517654801374613,0.400289501436861,0.468150013133842,0.254759696941804,0.437094988432183,-0.0325872205970859,0.836144764442067,0.125461565748516,0.331867920539183,0.425840430841556,0.171850276625726,0.0407791265591311,-0.0192538796589713,0.255922914572376,0.0239636056268684,0.227632020799765,0.76055005016228,0.480221386132776,0.333341821328028,-0.0852689811454426,0.358341215766307,0.250970921182011,0.289029887421654,0.449068807261954,0.583146069601109,0.228978883047481,0.63111042286361,0.023850336827954,0.452290849282328,0.578742280786244,0.554359502678902,0.556969104335493,0.138403281900649,0.22584482430959,0.223096295099123,0.64367738772764,0.36704862212267,0.165169045005877,0.160295502789116,0.346761962313702,0.220024690803367,0.228831707404389,0.107673936190288,0.330438883614105,0.470901382366598,0.327958145246053,0.458075000565757,0.364310506611494,0.26330311542969,0.537743168115333,0.376419012773709,-0.00985692576995287,0.60671891130294,0.678159886011044,0.571315841412644,0.414549038828978,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.209597506862415,0.129225182867332,0.302350384781781,-0.265879043943754,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.253676102438086,-0.336894705459779,-0.253676102438086,-0.265879043943754,-0.265879043943754,-0.289978339622017,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,0.168164654467644,-0.0533639606267119,-0.196840383943609,-0.336894705459779,-0.145065031452747,0.0252628169973347,0.587639161388024,-0.211242630742766,0.198863520361856,-0.000114241564852513,-0.144733436237727,-0.336894705459779,-0.0710156615160257,-0.0113329116170072,-0.147728806397128,-0.336894705459779,-0.172467376805525,-0.336894705459779,0.276988945796153,0.0195274844146587,0.108742457297059,-0.336894705459779,-0.0177725115231572,-0.336894705459779,0.399141430417757,0.0284400584736295,0.0277149500327047,0.109074543786573,-0.154806746439253,-0.183667805825795,-0.100105712941124,0.450466544986843,-0.0873316276121703,0.124168626681852,-0.238847853301188,-0.336894705459779,0.00552688255015887,0.0096030885640419,-0.131056164863178,-0.253676102438086,-0.118520230398976,0.119486036581027,0.098918084959458,-0.220971596708594,0.30121199052054,0.0263701503518006,0.00676688876741105,0.211642476442318,-0.125159346178218,-0.253676102438086,-0.0393615900383302,0.2774031688196,-0.253676102438086,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.301820623444727,-0.011044983816881,-0.336894705459779,-0.101623615384654,-0.182930956785008,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.336894705459779,-0.0299177094403965,-0.111593284766945,0.0846847291554743,-0.336894705459779,0.181962334832547,-0.195596847061325,-0.0842433878521773,-0.265879043943754,0.0813125697344523,-0.122409368047893,-0.336894705459779,-0.223032647980307,-0.265879043943754,-0.265879043943754,-0.0751922558926867,-0.274418423868945,-0.25871612113641,0.206694620884648,-0.253676102438086,0.205823880605814,0.134458881632066,0.0810773521382467,0.14029895290194,0.213950739667525,0.197685487731922,0.202615936221161,0.141815734598448,-0.300163584621549,-0.0878378941998278,0.0952859994695947,-0.113457062876436,0.0636105567813798,-0.0846770451185954,0.341150609547559,0.0143895817166151,0.275645826092431,-0.207418695955804,-0.173093580064635,-0.336894705459779,-0.336894705459779,-0.0371651335243638,0.265952553846206,0.587639731372737,0.608992502672887,0.374271119977251,-0.0032857625197194,-0.0616449956014185,-0.148571190101904,-0.336894705459779,0.470407521794667,-0.336894705459779,0.178257835223243,0.332102780025793,-0.132496206002819,0.496988067184412,0.69942269175444,0.585553488465433,0.103588877036934,0.387159046760468,-0.253676102438086,-0.217925119430374,-0.192992756031482,-0.127538939506249,-0.091980734033258,-0.336894705459779,0.000443919632258483,-0.0460982212041623,-0.132606865567819,-0.19747576670275,-0.253676102438086,-0.336894705459779,0.0386446405066205,0.0912437307402781,0.489334969448567,0.0173849804353031,-0.147043287312204,-0.336894705459779,0.0497495379919735,0.128361999806304,0.332774063407535,0.51452011968968,0.345613912336622,0.857924485920909,0.594485319752798,0.571619274011247,-0.265879043943754,-0.336894705459779,0.71976890559617,-5.10921380851848e-05,0.111619047173941,-0.29399360630755,0.0692872112901741,-0.163972161344562,0.0373090963311046,0.350922250705916,-0.125067127255052,-0.304077225434439,-0.216964439636875,-0.192507478484479,-0.289171260626245,-0.336894705459779,0.368714741766555,0.154415653870511,0.235470647841141,0.272974427850164,-0.0394366885095774,-0.273541041275745,0.0218812856706675,0.133283468234066,-0.0547706146138885,-0.0356919589531117,-0.141118245586801,-0.0652041665029447,-0.336894705459779,0.291442168161953,-0.265879043943754,-0.156818674869296,0.0840484663691347,-0.336894705459779,-0.109098849500943,0.309789355722914,0.191958434265457,0.448625292248307,0.236428816644475,0.258536990098824,0.197111774925681,0.540678193970077,0.629139290730173,0.260065815229066,0.177268397968879,0.120382806024917,0.0249874815012336,0.0957367180510227,0.338182690431139,0.368548344993901,0.235857748119778,0.320133460912222,0.353397184857782,0.0805936774714509,0.140275079134462,0.114274296985986,0.0882914711517334,0.210770332879636,0.759454121685569,0.311700044423598,0.389490427006115,0.281119631635966,0.349061585022051,-0.121171302906305,0.0967865083776655,0.737074386957169,0.266227157582506,0.0555243910474976,0.269971240121725,0.311522328718201,0.331862752950524,0.380228813807444,0.254600356658752,0.38830457155668,0.419291269004458,0.0094036867276136,0.357726235732266,-0.105142836787697,-0.336894705459779,-0.313309167895095,-0.336894705459779,-0.244416800548104,0.240890567556304,0.128429867741014,-0.265879043943754,-0.252896635030882,-0.336894705459779,0.0642861277188768,-0.263504141965539,0.14279925172371,0.205720248002171,-0.242354608450895,-0.209205014842803,-0.336894705459779,-0.220865409331275,-0.240555876628194,-0.336894705459779,-0.265879043943754,-0.336894705459779,0.568629418919256,-0.336894705459779,-0.265879043943754,0.253073865805977,0.644238333383592,-0.00224772629014963,-0.253676102438086,-0.0837368303435937,0.082561770059067,-0.0340689749745543,0.157732077174508,0.00442388274184791,0.0482992757527522,0.310015579974825,0.0954080346751993,0.0928170916916614,0.370307401902108,0.514492904770211,-0.0555734151126885,0.253965250667475,0.00619179099610706,-0.265879043943754,-0.263716855507731,-0.00186271941017768,-0.213845835221845,-0.077026540244967,0.0815560818889014,-0.263933908170142,-0.0441448987971,0.0898245512627304,-0.0763958022504992,-0.14705143812824,0.204816290926797,-0.336894705459779,0.421048388803602,-0.265879043943754,-0.265879043943754,-0.268226551711752,-0.253676102438086,-0.0683566135881493,-0.336894705459779,0.508530958677995,-0.0771017392425515,0.116673994310701,0.177056356207499,-0.0738256306588716,-0.146716676666322,-0.0851158913490553,-0.016013782598723,-0.253676102438086,0.0682648709288531,-0.336894705459779,-0.069478346223471,-0.114617722864352,-0.319729130311871,-0.0243954475514311,0.149665648240065,0.307363862328658,0.370440671032081,0.322093336054553,-0.098271021034288,-0.336894705459779,-0.336894705459779,-0.265879043943754,-0.0386814337743528,-0.0817906548433917,-0.0339523257245795,0.0114899493909464,0.201396926867431,-0.041252099826647,-0.00673151006243433,0.264484825309979,0.267413429488383,0.0289005517344658,-0.174585190023885,-0.25809335264837,-0.204877030542039,-0.279034997065472,-0.291595000494233,0.0780615543878025,-0.20222959708484,-0.18003228254772,-0.200076199931952,-0.148164000129911,-0.173974240013491,-0.113457181042546,-0.164973665704413,0.027200255556445,0.480171313285066,-0.200193688236268,-0.123881706245107,-0.326117813980064,-0.10282922331119,-0.053897447114406,-0.232662349835613,-0.224880199874296,-0.0541687171415483,-0.0852505056680017,-0.190053224450568,0.275923411045846,-0.108618556484887,-0.265879043943754,0.558850053520874,0.458938303558315,0.554441075570731,-0.202073527156605,-0.208640568344119,-0.285086988938813,-0.265879043943754,-0.336894705459779,-0.298713868143032,-0.336894705459779,0.0637423857679751,0.00169530354758418,0.158731299052304,-0.0590658713073111,0.0919422414242242,-0.0616034798256571,-0.309712767784337,-0.219499580106664,-0.0894073665768512,-0.216901606475671,-0.185932236811912,0.36121827031149,0.265041715380237,-0.0961277197849167,-0.050800222973901,-1.18045105733655e-05,0.179487173286019,0.0264980176081832,0.330317227314173,-0.069054016348722,0.258700030674611,-0.164009989673678,0.0665737552411307,-0.145875677998513,-0.186237041125258,-0.336894705459779|full_id=C1899_Mesenchymal_Fibroblast_Urothelial_Smooth_mucinous_Pericytes_Keratocytes|id=C1899|ontology_enrichment_celltype=CL:0000057!1.04e-18!76;CL:0002321!1.89e-18!250;CL:0000183!9.59e-13!59;CL:0000055!1.78e-12!106;CL:0000680!1.87e-12!58;CL:0000056!1.87e-12!58;CL:0000355!1.87e-12!58;CL:0000187!2.13e-11!55;CL:0000393!1.63e-10!61;CL:0000211!1.63e-10!61;CL:0000222!1.87e-10!121;CL:0000192!2.19e-09!43;CL:0000514!2.19e-09!43;CL:0000066!7.09e-07!253|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0000481!1.95e-18!342;UBERON:0000475!8.40e-18!264;UBERON:0000119!4.09e-16!309;UBERON:0000486!4.82e-16!83;UBERON:0003102!6.27e-16!99;UBERON:0000483!1.49e-15!306;UBERON:0005256!1.73e-13!122;UBERON:0003104!3.02e-13!160;UBERON:0009142!3.02e-13!160;UBERON:0000468!5.48e-13!656;UBERON:0002329!5.56e-13!71;UBERON:0003059!5.56e-13!71;UBERON:0007282!5.56e-13!71;UBERON:0004290!5.56e-13!71;UBERON:0009618!5.56e-13!71;UBERON:0007524!5.72e-13!73;UBERON:0003077!7.85e-13!72;UBERON:0007285!7.85e-13!72;UBERON:0007503!1.21e-12!78;UBERON:0001134!2.89e-12!62;UBERON:0002036!2.89e-12!62;UBERON:0003082!2.89e-12!62;UBERON:0002100!4.85e-12!199;UBERON:0000467!4.98e-12!624;UBERON:0000480!7.44e-12!625;UBERON:0002385!1.48e-11!64;UBERON:0001015!1.48e-11!64;UBERON:0000383!1.48e-11!64;UBERON:0000477!1.99e-11!373;UBERON:0000490!1.99e-10!148;UBERON:0000064!1.31e-08!218;UBERON:0004923!4.69e-08!66;UBERON:0004111!5.36e-08!240;UBERON:0000033!9.03e-08!56;UBERON:0007100!1.16e-07!27;UBERON:0002199!1.34e-07!46;UBERON:0002416!1.34e-07!46;UBERON:0004119!2.03e-07!160;UBERON:0000925!2.03e-07!160;UBERON:0006595!2.03e-07!160;UBERON:0004872!2.23e-07!83;UBERON:0003914!2.78e-07!117;UBERON:0001444!6.78e-07!49;UBERON:0002050!9.56e-07!564;UBERON:0005423!1.00e-06!581|tf_chipseq_enrich=CTCFL#140690;5:19.7464743589744:3.32745051287657e-07:1.65878569982967e-05!E2F1#1869;5:4.90738921487932:0.000351281809925646:0.0035320613215389!E2F6#1876;5:5.01715573169739:0.000314497859929779:0.0032303149088519|tfbs_overrepresentation=0.23317,0.0958562,0.877965,0.078254,0.310241,0.110737,0.0706464,0.5903,0.0539364,0.0424746,0.221396,0.346629,0.294377,0.201017,0.235304,0.101024,0.223746,0.158251,0.0865245,0.173528,0.29418,0.211047,0.13286,0.153106,0.0683222,0.332688,0.324018,0.146582,0.227906,0.150721,0.31768,0.182756,0.0298713,0.322378,0.108398,0.136785,1.49365e-07,0.070583,0.192426,0.108683,0.155571,0.0406818,0.222325,0.287476,0.193292,0.0596699,0.0625547,0.28382,0.178503,7.54537e-05,0.243359,0.0886583,0.114185,0.150136,0.308837,0.0632035,0.172598,0.328738,0.127101,0.169687,0.0485674,0.236408,0.174369,0.123348,0.0892839,0.0827236,0.515105,0.0980005,0.139298,0.262613,0.547889,0.110232,0.143944,0.190944,0.012429,0.0283664,0.155593,0.0717582,0.0613084,0.0120583,0.154245,0.348799,0.0698251,0.183986,0.436695,0.38341,0.104918,0.323505,0.021784,0.102375,0.138802,0.0812726,0.153861,0.0777027,0.138224,0.184264,0.182508,0.242703,0.149747,0.413729,0.0939617,0.416542,0.00228548,0.0610111,0.337778,0.0672793,0.109136,0.497282,0.228612,0.407248,0.285407,0.0560173,0.23661,0.0293017,0.162943,0.0556189,0.0336673,0.0926302,0.220791,0.13579,0.262107,0.331577,0.222452,0.138843,0.164723,0.277102,0.146529,0.0245339,0.136609,0.214614,0.0973103,0.121587,0.0935301,0.0376876,0.200735,0.173595,0.105753,0.0905147,0.0544577,0.0065834,0.037671,0.203496,0.316207,0.246229,0.194394,0.112838,0.159217,0.1364,0.0640569,0.193163,0.311509,0.227801,0.282656,0.0439093,0.070163,0.188135,0.121467,0.350865,0.0846706,0.0555742,0.349932,0.153706,0.186743,0.23397,0.412853,0.183121,0.065826,0.203135,0.0663482,0.463935,0.281162,0.218835,0.646289,0.0885874,0.129639,0.145577,0.22277,0.284267,0.27935,0.0586816,0.250461,0.195671,0.0452583,0.185103,0.11983,0.190123,0.286036,0.0660586,0.134265,0.272191,0.172119,0.292239,0.00147953,0.351465,0.18064,0.0772176,0.126988,0.0984435,0.110187,0.176022,0.144361,0.0986228,0.0508565,0.0989516,0.21691,0.393782,0.412989,0.240045,0.319604,0.279218,0.0752697,0.167805,0.193654,0.180992,0.464566,0.265567,0.258402,0.162511,0.102771,0.165687,0.225173,0.540012,0.246322,0.253699,0.120044,0.201982,0.220536,0.139142,0.0987108,0.09782,0.410084,0.554981,0.0687568,0.124225,0.1547,0.150448,0.0774663,0.398789,0.257365,0.331711,0.285222,0.511,0.158559,0.134615,0.186192,0.217494,0.132125,0.179065,0.540443,0.187334,0.250769,0.289141,0.289982,0.157983,0.158078,0.251693,0.172268,0.313249,0.113261,0.0601691,0.101058,0.274448,0.25718,0.204241,0.0568578,0.131428,0.131579,0.148683,0.188945,0.122666,0.419402,0.103245,0.387442,0.0778535,0.14011,0.0626022,0.2074,0.769028,0.0603274,0.252309,0.50169,0.748392,0.784283,9.13083e-10,0.493893,0.808889,0.396701,0.258806,0.541514,0.127393,0.675971,0.487888,0.568246,0.486439,0.720623,0.796904,0.410803,0.43779,0.579996,0.0108647,0.766049,0.447317,0.292173,0.528152,0.284119,0.601223,0.176507,0.488132,0.336705,0.604733,0.545464,0.645432,0.00212057,0.714193,0.706516,0.537972,0.591562,0.302575,0.385794,0.417358,0.450485,0.665656,0.470142,0.344006,0.688397,0.785741,0.426591,0.467379,0.762263,0.437202,0.628658,0.419367,0.592924,0.438692,0.660225,0.0739852,0.541742,0.762222,0.790857,0.285074,0.018127,1.81112e-09,0.0297733,0.415372,0.362164,0.289863,0.507647,0.137929,0.409489,0.80581,0.688223,0.699429,0.707862,0.379008,0.423719,0.655494,0.256985,0.109234,0.11883,0.288602,0.779806,0.0115589,0.766165,0.588284,0.843506,0.147327,0.737273,0.628596,0.337121,0.464864,0.861932,0.0740433,0.121457,0.351733,0.00220507,0.773103,0.687274,0.441154,0.503865,0.660832,0.43388,0.483295,0.000836086,0.418989,0.935814,0.239606,0.350461,0.495024,0.307173,0.246694,0.407051,0.598317,0.300406,0.597346,0.702113,3.77769e-05,0.493489,0.229501,0.230597,0.195392,0.544572,0.627794,0.641833,0.383956,0.241286,0.0764074,0.217887,0.393543,0.214395,0.158849,0.732038,0.439833,0.427746,0.504398,0.456725,0.455709,0.784142,0.688249,0.349388,0.427794,0.398041,0.524026,0.347879,0.0576919,0.593219,0.529253,0.64728,0.031869,0.319495,0.00178136,0.827435,0.616333,0.407113,0.498776,0.387091,0.423517,0.224914,0.636791,0.0359783,0.251608,0.076676,0.539805,0.356278,0.295455,0.144104,0.0972855,0.710825,0.80526,0.508875,0.725283,0.512109,0.658411,0.578577,0.818493,0.809533,0.469232,0.113555,0.0910724,0.299839,0.126587,0.0940929,0.22877,0.343849,0.315824,0.622796,0.0751409,0.0498759,0.179502,0.43406,0.0715061,0.452515,0.201779,0.214491,0.171725,0.412647,0.102448,0.000184904,0.029672,0.453305,0.421335,0.561724,0.0762646,0.266371,0.183582,0.168118,0.145381,0.140277,0.251925,0.172066,0.0720324,0.00647589,0.19738,0.205854,0.32541,0.301472,0.507714,0.0818982,0.134306,0.108669,0.284804,0.0169728,0.338195,0.146979,0.304235,0.210475,0.00544513,0.0790025,0.310539,0.0119441,0.203728,0.275452,0.288155,0.265827,0.0105597,0.153627,0.0186891,0.342497,0.171961,0.415228,0.00800917,0.272406,0.223952,0.327153,0.0496113,0.20949,0.0730994,0.0857377,0.323267,0.24204,0.129414,0.157037,0.252398,0.197279,0.146467,0.0912686,0.425114,0.123863,0.218241,0.0242146,0.10708,0.327369,0.339826,0.12998,0.123097,0.254847,0.300809,0.0898207,0.126545,0.0918749,0.0686325,0.0569043,0.0639461,0.387306,0.267408,0.312064,0.080156,0.274185,0.53753,0.0545112,0.00618348,0.33844,0.0649137,0.0974216,0.595767,0.195675,0.174786,0.176557,0.0917509,0.0472148,1.41908e-06,0.229138,0.0639045,0.141461,0.0900204,0.228387,0.385962,0.334921,0.296227,0.208788,0.566117,0.36304,0.430936,0.123626,0.270619,0.132705,0.285556,0.0052066,0.233835,0.224471,0.262929,0.223204,0.143824,0.460679,0.431098,0.0775891,0.153079,9.78096e-07,0.211515,0.125701,0.175283,0.204954,0.209341,3.47252e-11,0.629422,0.084895,0.160115,0.0819954,0.10091,0.122658,0.151161,0.228398,0.056055,0.120552,0.41771,4.3357e-06,0.830533,0.335207,0.434016,0.190688,0.299739,0.278645,1.62728e-07,0.0940982,0.0780533,0.202744,0.0993772,0.274769,0.448923,0.11602,0.344528,0.436413,0.0585992,0.20045,0.274438,4.10608e-10,4.85072e-12,0.319826,0.336512,0.173868,0.109708,0.174594,0.0809806,0.154589,0.318794,0.122767,0.0749261,0.176858,0.114361,0.347759,0.242462,0.0620267,0.211111,0.0738743,0.0882327,0.183058,0.150073,0.270522,0.16872,0.341388,0.0934526,0.359135,0.123404,0.00268781,0.240825,0.3033,0.00849634,0.163542,0.483244,0.27134,0.500871,0.239667,0.10226,0.29809,0.235147,3.11183e-05,0.245965,0.116923,0.148426,0.0983658,0.228743,0.238223,0.156976,0.244789,0.267391,0.301441,0.21807,0.350528,0.382904,0.432408,0.190404,0.135865,0.488841,0.18137,0.180609,0.291283,0.273972,0.153023,0.400137,0.37958,0.22307,0.160699,5.89267e-08,0.166736,0.181253,0.0422294,0.263877,0.146486,0.769574,0.262486,0.294204,0.131936,0.288826,0.246621,0.463617,0.0333587,0.0965376,0.0822869,0.0432352,0.336564,0.35463,0.581771,0.0805078,0.0594155,0.587524,0.208795,0.0713793,0.212621,4.91683e-06,0.53612,0.629713,0.581874,0.355154,0.377285,0.619037,0.537088,0.603804,0.629445,0.306963,0.569605,0.526495,0.580285,0.550495,0.424482,0.820986,0.610475,0.881697,0.561689,0.672416,0.685628,0.623136,0.708698,2.6218e-11,4.46467e-09,0.349068,0.70429,0.476117,0.557035,0.427789,0.689998,0.0119463,0.0238314,0.433702,0.258394,0.644878,0.432123,0.759415,0.661773,0.494975,0.0903515,0.392155,0.626931,0.371758,2.4212e-06,0.562417,0.0738477,0.128028,0.254547,0.0309722,0.249366,0.680843,2.426e-05,0.541378,3.10456e-06,0.0243913,9.01369e-08,0.00252383,0.00389983,0.000636369,0.311289,0.318577,0.4488,0.389888,0.603509,0.161355,0.553178,0.246387,0.224252,0.0603905,0.155054,0.466978,0.518234,0.257848,0.353942,0.192234,0.427276,0.747776,0.131598,0.283682,0.424668,0.111989,0.797471,0.0587897,0.702164,0.477016,0.263776,0.498956,0.00120325,0.55798,0.708394,2.10026e-13,0.723248,0.34194,0.592696,0.592314,0.644904,0.0254154,0.763919,0.317485,0.633504,0.220564,0.0413332,0.262394,0.307462,0.135076,0.469588,0.0251525,0.274593,0.490712,0.183857,0.709432,0.00208999,0.531474,0.720644,0.0101223,0.00736363,0.361524,0.31558,0.412744,0.54408,0.62698,0.513592,0.415367,0.00780578,0.0239664,0.36864,0.538745,0.456862,0.453004,0.0289228,0.557093,0.693441,0.382214,0.553161,0.639572,0.68995,0.339393,0.332211,0.306231,0.298354,0.646049,0.453817,0.457741,0.641611,0.426239,0.748909,0.656093,0.572661,0.100067,0.534679,0.41502,0.55475,0.66153,0.170461,0.499347,0.00056654,0.206772,0.557732,0.490527,0.714189,0.44799,0.236683,0.318338,0.276338,0.126433,0.417412,0.318174,0.0555558,0.295666,0.393022,0.293641,0.116969,0.401231,0.255983,0.297663,0.256708,0.338258,0.322052,0.145568,0.153833,0.261242,0.38389,0.54721,0.388459,0.321362,0.627637,0.280757,0.301366,0.340343,0.343265,0.501812,0.462092,0.336254,0.308589,0.291523,0.19697,0.309816,0.0537285,0.15063,0.198077,0.281455,0.348739,0.419895,0.138495,0.208834,0.32256,0.377566,0.342366,0.109684,0.322704,0.403482,0.181288,0.230841,0.352328,0.255358,0.351665,0.265112,0.0633313,0.10772,0.0854747,0.0747609,0.406458,0.312881,0.512825,0.244656,0.192188,0.158985,0.174153,0.0972854,0.333309,0.249919,0.339517,0.303699,0.198326,0.394084,0.458518,0.282501,0.252005,0.0889203,0.238377,0.334983,0.197875,0.287909,0.289389,0.117618,0.392533,0.396962,0.316002,0.330317,0.321404,0.225079,0.300542,0.379651,0.185715,0.345505,0.375521,0.271405,0.311201,0.221943,0.306427,0.367733,0.246925,0.208775,0.0886961,0.343014,0.270094,0.276922,0.156279,0.313647,0.461742,0.422872,0.336468,0.13327,0.313545,0.17149,0.0877361,0.0880065,0.238969,0.126615,0.0669467,0.0879453,0.474066,0.396935,0.326779,0.292869,0.358198,0.29552,0.131776,0.158116,0.104606,0.194814,0.104167,0.168186,0.108081,0.123829,0.205215,0.175247,0.0724304,0.109077,0.144842,0.0604892,0.214671,0.316879,0.442567,0.430541,0.508546,0.224871,0.398887,0.389061,0.310732,0.349611,0.445995,0.385709,0.278202,0.426488,0.400591,0.209809,0.253154,0.319519,0.309489,0.430805,0.362154,0.480785,0.185476,0.336314,0.344469,0.184651,0.303359,0.297596,0.42392,0.425912,0.380826,0.259046,0.345068,0.151046,0.483953,0.347171,0.321735,0.15463,0.13907,0.470121,0.269432,0.250466,0.409882,0.115686,0.408975,0.162633,0.342661,0.27567,0.248127,0.33299,0.384731,0.319112,0.526476|tfbs_overrepresentation_for_novel_motifs=0.508327,0.0561813,0.500341,0.654974,0.454983,0.653236,0.733342,0.324142,0.321368,2.31449,0.621241,0.778743,2.11893,0.721271,0.453496,0.478935,2.21256,0.395009,0.287891,0.167776,0.500405,1.83059,0.645033,0.44943,1.35492,0.802434,0.25115,0.642741,0.458349,1.90917,0.598009,1.00172,0.359091,0.27659,1.88355,1.62925,1.87167,0.654459,0.388123,1.48009,0.415749,0.580638,1.33238,0.451846,4.26571,2.27128,0.734485,0.609718,0.124583,1.16046,0.817229,0.746838,0.191745,1.08035,1.2359,1.72052,0.4631,0.689906,0.233662,0.688844,1.04369,0.736968,0.321912,0.935408,0.755773,0.899893,1.32544,1.69665,0.991065,1.53343,0.566575,0.330474,6.79739,1.23387,2.09345,0.709554,0.240727,0.917983,0.987729,0.543014,0.293154,0.934302,0.755403,0.327263,1.18161,21.4251,2.19312,0.228496,1.96782,1.79645,1.41984,1.15413,1.01895,0.367039,4.06216,0.381528,0.28626,1.06255,0.849074,2.52127,0.389604,1.01316,1.05685,0.967698,0.88799,2.54079,0.951411,0.717647,0.549347,0.437618,0.512457,1.05402,0.494368,0.631235,1.37132,0.412056,5.65192,2.47721,0.897476,0.370186,1.22546,0.841768,0.650322,0.767198,1.48307,0.918767,0.72668,1.02407,1.2687,0.382577,1.15483,0.601055,1.28328,0.763715,1.43285,0.221105,0.591636,0.643339,1.38998,2.25246,1.84906,1.35224,0.728494,1.05895,0.889806,0.680988,0.87256,2.09294,0.577088,0.363423,0.526389,4.84969,1.15522,0.312599,0.736459,1.56426,0.827475,0.439798,0.54968,4.42268,1.35101,1.13636,0.98692,0.522159,0.906429,0.754576,0.35004,0.731946,8.37667|tfbs_overrepresentation_jaspar=MA0003.1;6.94052,MA0004.1;0.626788,MA0006.1;0.452993,MA0007.1;0.606704,MA0009.1;1.11255,MA0014.1;17.7746,MA0017.1;0.496101,MA0019.1;0.784036,MA0024.1;1.00439,MA0025.1;1.24931,MA0027.1;2.73598,MA0028.1;0.470679,MA0029.1;1.02437,MA0030.1;1.01252,MA0031.1;0.945567,MA0038.1;0.736268,MA0040.1;1.03042,MA0041.1;0.64667,MA0042.1;0.612397,MA0043.1;1.11288,MA0046.1;1.10134,MA0048.1;0.195817,MA0050.1;0.613347,MA0051.1;0.731787,MA0052.1;1.03442,MA0055.1;0.0853006,MA0056.1;0,MA0057.1;1.66737,MA0058.1;0.523638,MA0059.1;0.522232,MA0060.1;0.321781,MA0061.1;0.291022,MA0063.1;0,MA0066.1;0.736721,MA0067.1;1.43651,MA0068.1;0.247962,MA0069.1;1.09737,MA0070.1;1.08584,MA0071.1;0.695094,MA0072.1;1.0812,MA0073.1;4.94585,MA0074.1;0.730989,MA0076.1;0.540943,MA0077.1;1.07324,MA0078.1;0.836493,MA0081.1;0.522409,MA0083.1;1.12028,MA0084.1;1.62584,MA0087.1;1.07867,MA0088.1;3.31872,MA0089.1;0,MA0090.1;0.556637,MA0091.1;0.629594,MA0092.1;0.588959,MA0093.1;0.456342,MA0095.1;0,MA0098.1;0,MA0100.1;0.750974,MA0101.1;0.459973,MA0103.1;0.442769,MA0105.1;1.58771,MA0106.1;0.779931,MA0107.1;0.378225,MA0108.2;0.94238,MA0109.1;0,MA0111.1;0.5713,MA0113.1;0.797251,MA0114.1;0.372523,MA0115.1;1.35895,MA0116.1;4.68138,MA0117.1;1.1512,MA0119.1;0.504689,MA0122.1;1.17777,MA0124.1;1.31673,MA0125.1;1.23103,MA0130.1;0,MA0131.1;0.855546,MA0132.1;0,MA0133.1;0,MA0135.1;1.14377,MA0136.1;0.743749,MA0139.1;1.39016,MA0140.1;0.692258,MA0141.1;1.29278,MA0142.1;0.912455,MA0143.1;0.797437,MA0144.1;0.356507,MA0145.1;1.39943,MA0146.1;2.90482,MA0147.1;1.00307,MA0148.1;0.653474,MA0149.1;0.681935,MA0062.2;0.284987,MA0035.2;0.691506,MA0039.2;14.4774,MA0138.2;0.837782,MA0002.2;0.30855,MA0137.2;0.47779,MA0104.2;1.54865,MA0047.2;0.767096,MA0112.2;0.839774,MA0065.2;0.146576,MA0150.1;0.550239,MA0151.1;0,MA0152.1;0.69926,MA0153.1;1.21379,MA0154.1;0.172764,MA0155.1;0.409315,MA0156.1;0.480289,MA0157.1;0.883854,MA0158.1;0,MA0159.1;1.00463,MA0160.1;0.669748,MA0161.1;0,MA0162.1;9.13843,MA0163.1;3.1409,MA0164.1;0.810347,MA0080.2;0.456437,MA0018.2;0.781393,MA0099.2;0.699641,MA0079.2;22.9502,MA0102.2;1.66336,MA0258.1;0.345771,MA0259.1;0.395396,MA0442.1;0}} | ||
|full_id=C1899_Mesenchymal_Fibroblast_Urothelial_Smooth_mucinous_Pericytes_Keratocytes | |||
|id=C1899 | |||
}} |
Latest revision as of 11:54, 17 September 2013
Full id: C1899_Mesenchymal_Fibroblast_Urothelial_Smooth_mucinous_Pericytes_Keratocytes
Phase1 CAGE Peaks
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
No GOStat results
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.04e-18 | 76 |
embryonic cell | 1.89e-18 | 250 |
contractile cell | 9.59e-13 | 59 |
non-terminally differentiated cell | 1.78e-12 | 106 |
muscle precursor cell | 1.87e-12 | 58 |
myoblast | 1.87e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.87e-12 | 58 |
muscle cell | 2.13e-11 | 55 |
electrically responsive cell | 1.63e-10 | 61 |
electrically active cell | 1.63e-10 | 61 |
mesodermal cell | 1.87e-10 | 121 |
smooth muscle cell | 2.19e-09 | 43 |
smooth muscle myoblast | 2.19e-09 | 43 |
epithelial cell | 7.09e-07 | 253 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 6.94052 |
MA0004.1 | 0.626788 |
MA0006.1 | 0.452993 |
MA0007.1 | 0.606704 |
MA0009.1 | 1.11255 |
MA0014.1 | 17.7746 |
MA0017.1 | 0.496101 |
MA0019.1 | 0.784036 |
MA0024.1 | 1.00439 |
MA0025.1 | 1.24931 |
MA0027.1 | 2.73598 |
MA0028.1 | 0.470679 |
MA0029.1 | 1.02437 |
MA0030.1 | 1.01252 |
MA0031.1 | 0.945567 |
MA0038.1 | 0.736268 |
MA0040.1 | 1.03042 |
MA0041.1 | 0.64667 |
MA0042.1 | 0.612397 |
MA0043.1 | 1.11288 |
MA0046.1 | 1.10134 |
MA0048.1 | 0.195817 |
MA0050.1 | 0.613347 |
MA0051.1 | 0.731787 |
MA0052.1 | 1.03442 |
MA0055.1 | 0.0853006 |
MA0056.1 | 0 |
MA0057.1 | 1.66737 |
MA0058.1 | 0.523638 |
MA0059.1 | 0.522232 |
MA0060.1 | 0.321781 |
MA0061.1 | 0.291022 |
MA0063.1 | 0 |
MA0066.1 | 0.736721 |
MA0067.1 | 1.43651 |
MA0068.1 | 0.247962 |
MA0069.1 | 1.09737 |
MA0070.1 | 1.08584 |
MA0071.1 | 0.695094 |
MA0072.1 | 1.0812 |
MA0073.1 | 4.94585 |
MA0074.1 | 0.730989 |
MA0076.1 | 0.540943 |
MA0077.1 | 1.07324 |
MA0078.1 | 0.836493 |
MA0081.1 | 0.522409 |
MA0083.1 | 1.12028 |
MA0084.1 | 1.62584 |
MA0087.1 | 1.07867 |
MA0088.1 | 3.31872 |
MA0089.1 | 0 |
MA0090.1 | 0.556637 |
MA0091.1 | 0.629594 |
MA0092.1 | 0.588959 |
MA0093.1 | 0.456342 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 0.750974 |
MA0101.1 | 0.459973 |
MA0103.1 | 0.442769 |
MA0105.1 | 1.58771 |
MA0106.1 | 0.779931 |
MA0107.1 | 0.378225 |
MA0108.2 | 0.94238 |
MA0109.1 | 0 |
MA0111.1 | 0.5713 |
MA0113.1 | 0.797251 |
MA0114.1 | 0.372523 |
MA0115.1 | 1.35895 |
MA0116.1 | 4.68138 |
MA0117.1 | 1.1512 |
MA0119.1 | 0.504689 |
MA0122.1 | 1.17777 |
MA0124.1 | 1.31673 |
MA0125.1 | 1.23103 |
MA0130.1 | 0 |
MA0131.1 | 0.855546 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 1.14377 |
MA0136.1 | 0.743749 |
MA0139.1 | 1.39016 |
MA0140.1 | 0.692258 |
MA0141.1 | 1.29278 |
MA0142.1 | 0.912455 |
MA0143.1 | 0.797437 |
MA0144.1 | 0.356507 |
MA0145.1 | 1.39943 |
MA0146.1 | 2.90482 |
MA0147.1 | 1.00307 |
MA0148.1 | 0.653474 |
MA0149.1 | 0.681935 |
MA0062.2 | 0.284987 |
MA0035.2 | 0.691506 |
MA0039.2 | 14.4774 |
MA0138.2 | 0.837782 |
MA0002.2 | 0.30855 |
MA0137.2 | 0.47779 |
MA0104.2 | 1.54865 |
MA0047.2 | 0.767096 |
MA0112.2 | 0.839774 |
MA0065.2 | 0.146576 |
MA0150.1 | 0.550239 |
MA0151.1 | 0 |
MA0152.1 | 0.69926 |
MA0153.1 | 1.21379 |
MA0154.1 | 0.172764 |
MA0155.1 | 0.409315 |
MA0156.1 | 0.480289 |
MA0157.1 | 0.883854 |
MA0158.1 | 0 |
MA0159.1 | 1.00463 |
MA0160.1 | 0.669748 |
MA0161.1 | 0 |
MA0162.1 | 9.13843 |
MA0163.1 | 3.1409 |
MA0164.1 | 0.810347 |
MA0080.2 | 0.456437 |
MA0018.2 | 0.781393 |
MA0099.2 | 0.699641 |
MA0079.2 | 22.9502 |
MA0102.2 | 1.66336 |
MA0258.1 | 0.345771 |
MA0259.1 | 0.395396 |
MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
TF | #promoters | Enrichment | p-value | q-value |
---|---|---|---|---|
CTCFL#140690 | 5 | 19.7464743589744 | 3.32745051287657e-07 | 1.65878569982967e-05 |
E2F1#1869 | 5 | 4.90738921487932 | 0.000351281809925646 | 0.0035320613215389 |
E2F6#1876 | 5 | 5.01715573169739 | 0.000314497859929779 | 0.0032303149088519 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.