FFCP PHASE1:Hg19::chr17:74023373..74023426,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:74023373..74023426,-
|short_description=p1@EVPL
|description=CAGE_peak_1_at_EVPL_5end
|association_with_transcript=80bp_to_ENST00000301607,NM_001988,uc002...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2125 | |EntrezGene=2125 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3503 | |HGNC=3503 | ||
|TSSclassifier=strong | |||
|UniProt=Q92817 | |UniProt=Q92817 | ||
|association_with_transcript=80bp_to_ENST00000301607,NM_001988,uc002jqi.2,uc010wss.1,uc010wst.1_5end | |||
|cluster_id=chr17:74023373..74023426,- | |||
|coexpression_cluster_id=C665 | |||
|description=CAGE_peak_1_at_EVPL_5end | |||
|id=chr17:74023373..74023426,- | |||
|ontology_enrichment_celltype=CL:0000066!1.58e-40!254;CL:0002076!4.22e-21!43;CL:0000223!6.17e-20!59;CL:0002368!1.08e-11!13;CL:0002251!3.92e-10!21;CL:0002202!7.69e-09!9;CL:0002632!7.69e-09!9;CL:0000082!1.14e-08!19;CL:1000497!5.29e-07!18;CL:0002518!5.29e-07!18;CL:0000076!6.11e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.23e-17;42!CL:0002368;3.18e-13;13!CL:0002251;1.46e-11;20!CL:0002202;5.95e-10;9!CL:0002632;5.95e-10;9!CL:1000507;2.26e-09;10!CL:1000494;2.26e-09;10!CL:1000449;3.79e-08;15!CL:0000082;5.32e-08;19!CL:1000497;7.26e-08;17!CL:0002518;7.26e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.90e-36,253;CL:0002076,2.38e-23,42;CL:0000223,1.05e-21,58;CL:0002368,2.40e-13,13;CL:0002251,1.52e-11,20;CL:0002202,5.00e-10,9;CL:0002632,5.00e-10,9;CL:1000507,2.05e-09,10;CL:1000494,2.05e-09,10;CL:1000449,3.48e-08,15;CL:0000082,4.40e-08,19;CL:1000497,7.38e-08,17;CL:0002518,7.38e-08,17 | |||
|ontology_enrichment_development_v019=CL:0000223;4.09e-11;58!UBERON:0008947;4.19e-10;29!UBERON:0006595;4.21e-09;86!UBERON:0001041;2.40e-07;30 | |||
|ontology_enrichment_disease=DOID:305!2.77e-27!106;DOID:0050687!9.91e-17!143;DOID:299!1.54e-09!25;DOID:1749!2.27e-09!14;DOID:162!3.82e-08!235;DOID:14566!1.63e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.31e-10;14!DOID:299;2.67e-09;25!DOID:305;7.28e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.13e-24,106;DOID:0050687,8.01e-14,143;DOID:1749,9.71e-11,14;DOID:299,2.64e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.44e-34!169;UBERON:0000925!1.44e-34!169;UBERON:0006595!1.44e-34!169;UBERON:0001007!4.12e-28!155;UBERON:0001555!4.12e-28!155;UBERON:0007026!4.12e-28!155;UBERON:0004921!5.98e-25!129;UBERON:0004185!5.98e-25!129;UBERON:0000077!1.26e-23!130;UBERON:0001004!1.50e-23!72;UBERON:0001041!2.42e-21!98;UBERON:0000464!5.48e-20!104;UBERON:0000065!3.50e-19!53;UBERON:0000466!4.32e-18!126;UBERON:0008947!5.62e-16!38;UBERON:0003258!5.62e-16!38;UBERON:0005177!3.16e-15!107;UBERON:0000072!1.22e-14!46;UBERON:0000062!2.69e-12!511;UBERON:0005178!2.86e-12!34;UBERON:0002224!2.86e-12!34;UBERON:0005911!5.72e-12!82;UBERON:0005181!1.15e-11!35;UBERON:0002048!1.23e-10!22;UBERON:0000117!1.23e-10!22;UBERON:0000171!1.23e-10!22;UBERON:0000170!1.23e-10!22;UBERON:0005597!1.23e-10!22;UBERON:0000118!1.23e-10!22;UBERON:0001008!2.13e-10!45;UBERON:0003104!4.73e-10!238;UBERON:0009142!4.73e-10!238;UBERON:0000161!5.71e-10!35;UBERON:0006554!8.48e-10!44;UBERON:0005153!1.25e-09!37;UBERON:0000058!1.39e-09!26;UBERON:0002553!1.51e-09!70;UBERON:0009569!3.05e-09!113;UBERON:0001048!3.43e-09!168;UBERON:0000064!5.12e-09!219;UBERON:0000166!7.15e-09!21;UBERON:0004807!1.08e-08!28;UBERON:0004802!1.14e-08!19;UBERON:0000115!1.14e-08!19;UBERON:0000481!1.23e-08!347;UBERON:0005631!1.85e-08!14;UBERON:0000158!1.85e-08!14;UBERON:0000915!2.06e-08!52;UBERON:0003064!6.12e-08!37;UBERON:0005157!1.39e-07!51;UBERON:0002108!1.66e-07!14;UBERON:0000063!1.66e-07!97;UBERON:0007196!2.62e-07!14;UBERON:0001558!2.62e-07!14;UBERON:0004876!2.89e-07!20;UBERON:0000080!3.40e-07!18;UBERON:0002120!3.40e-07!18;UBERON:0004875!3.40e-07!18;UBERON:0005721!3.40e-07!18;UBERON:0005754!3.40e-07!18;UBERON:0007297!3.40e-07!18;UBERON:0003886!6.04e-07!63;UBERON:0006555!9.02e-07!17;UBERON:0005103!9.02e-07!17;UBERON:0000083!9.02e-07!17;UBERON:0009201!9.02e-07!17;UBERON:0004819!9.02e-07!17;UBERON:0006553!9.02e-07!17;UBERON:0003074!9.02e-07!17;UBERON:0003060!9.02e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;4.52e-12;44!UBERON:0001004;2.03e-11;65!UBERON:0005178;2.54e-11;34!UBERON:0002224;2.54e-11;34!UBERON:0006554;7.59e-11;30!UBERON:0001008;7.59e-11;30!UBERON:0004807;2.76e-10;22!UBERON:0002048;3.72e-10;22!UBERON:0000117;3.72e-10;22!UBERON:0000171;3.72e-10;22!UBERON:0000170;3.72e-10;22!UBERON:0005181;5.21e-10;35!UBERON:0004211;2.26e-09;10!UBERON:0009773;2.26e-09;10!UBERON:0001231;2.26e-09;10!UBERON:0004810;2.26e-09;10!UBERON:0000072;2.90e-09;37!UBERON:0000161;1.46e-08;19!UBERON:0000166;1.46e-08;19!UBERON:0006555;3.79e-08;15!UBERON:0004819;3.79e-08;15!UBERON:0001285;3.79e-08;15!UBERON:0007684;3.79e-08;15!UBERON:0004802;5.32e-08;19!UBERON:0000115;5.32e-08;19!UBERON:0005911;7.54e-08;36!UBERON:0000165;8.07e-08;28!UBERON:0007196;1.20e-07;15!UBERON:0001558;1.20e-07;15!UBERON:0005631;1.34e-07;10!UBERON:0000158;1.34e-07;10!UBERON:0004921;2.07e-07;33!UBERON:0000974;2.70e-07;6!UBERON:0001041;3.51e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.31e-28,160;UBERON:0000925,2.31e-28,160;UBERON:0006595,2.31e-28,160;UBERON:0001007,1.23e-22,145;UBERON:0001555,1.23e-22,145;UBERON:0007026,1.23e-22,145;UBERON:0001004,1.41e-21,74;UBERON:0004921,3.36e-20,118;UBERON:0005177,1.89e-18,101;UBERON:0001041,1.12e-16,87;UBERON:0000065,1.56e-16,54;UBERON:0008947,1.23e-14,38;UBERON:0003258,1.23e-14,38;UBERON:0001008,1.32e-13,48;UBERON:0006554,6.97e-13,47;UBERON:0005178,1.03e-12,34;UBERON:0002224,1.03e-12,34;UBERON:0005181,3.94e-12,35;UBERON:0000072,8.52e-12,47;UBERON:0000161,1.64e-11,36;UBERON:0005911,6.82e-11,82;UBERON:0009569,7.08e-11,112;UBERON:0002048,2.90e-10,22;UBERON:0000117,2.90e-10,22;UBERON:0000171,2.90e-10,22;UBERON:0000170,2.90e-10,22;UBERON:0005597,2.90e-10,22;UBERON:0000118,2.90e-10,22;UBERON:0005153,4.92e-10,37;UBERON:0000166,9.47e-10,22;UBERON:0004810,2.05e-09,10;UBERON:0000915,2.51e-09,52;UBERON:0006555,1.24e-08,16;UBERON:0004819,1.24e-08,16;UBERON:0005631,1.35e-08,14;UBERON:0000158,1.35e-08,14;UBERON:0005157,1.80e-08,47;UBERON:0004211,3.48e-08,15;UBERON:0009773,3.48e-08,15;UBERON:0001231,3.48e-08,15;UBERON:0001285,3.48e-08,15;UBERON:0007684,3.48e-08,15;UBERON:0004208,3.48e-08,15;UBERON:0004802,4.40e-08,19;UBERON:0000115,4.40e-08,19;UBERON:0007196,1.01e-07,15;UBERON:0001558,1.01e-07,15;UBERON:0002100,1.52e-07,199;UBERON:0002113,2.11e-07,26;UBERON:0003918,2.11e-07,26;UBERON:0011143,2.11e-07,26;UBERON:0005095,2.11e-07,26;UBERON:0007687,2.11e-07,26;UBERON:0000165,2.43e-07,29;UBERON:0000930,2.43e-07,29;UBERON:0000489,2.43e-07,31;UBERON:0004807,4.21e-07,28;UBERON:0002075,9.60e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,18.4300452376132,51.6372864299596,11.5773927228991,15.5622517154788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39334510984468,19.3078457140575,25.6025030961513,21.4457325896737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,1.33037638477538,1.40535657109002,5.37014209540622,69.5804000638756,86.392775168772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.7597122756878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,13.3349988682675,9.27336810008838,4.30206893083506,0,0,0,0.207322110030741,0,0,0,0,0,0,0,1.0647612003586,2.02301628093722,2.16909926895134,1.7647035637183,0.871517776369625,1.66089433377768,1.48314438976181,2.15843611637881,0.38474715694639,0,0,0,0,0,0,0,0,0.491953754172454,1.20097467208968,20.9623045130475,17.9842805212191,5.83068039987459,11.5735556448162,0,0,0,0.579652024875384,0,0,0,0,33.1885847142896,44.6412804289334,0,0,0,3.74935335947108,4.87148171776693,1.98485136139341,0,0,2.30029607499127,0,0.088048434013226,40.4289825304506,56.9273815996998,36.231578393371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1251028578504,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21063587636898,8.10312702635888,0,0,0,8.12159303233341,4.23584354074281,12.5495963068297,8.76835347919564,2.84989398010764,0,0,2.59099099322567,0,4.6060894382455,6.02027728625824,7.13653564526107,8.31076008928724,7.61174166055406,0.219259876645935,0.261435451024901,0,0,0,2.06082023295445,0,0,8.03971753194641,9.1008434445113,0,0,0,0,0,0,0,0,0,7.76839102196597,6.3422722230485,11.6127568370072,6.87872909817739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.3506594398838,14.0763477862515,5.44454924306613,2.16530741786592,10.7626343167807,20.2165770801151,45.2298756607409,4.82419140434615,0,0,0,0,0,0,0,0,0,0,10.7817695031654,0,0.144269212976445,0,0,5.18906365725323,0.191505370132367,13.3354357116046,0,0,0,0,0,3.89371088943688,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1641351265343,0,0,0,1.98895302764489,180.968319431169,35.0418323382514,242.656954658393,0,0,0,0,0,0.796991953004279,0.552567831062295,0,0,0,0,10.8740704888265,5.01259289091706,0,6.31317796076375,0,0,0,0,0,7.29197731038653,6.55949999971468,0,6.60002000055898,45.7656570526979,13.4740978607724,0,0,0,0,0,0,0,0,0,1.41620002574687,29.1395625542281,21.3152216055518,0,0,0.448788222048861,0,36.0471310497069,6.13703875792477,9.59462596833542,0,0,0.664846727600626,0,0,0,0,0.794682894901893,0,3.59112177950125,0,0,6.96683351754953,3.44984501563023,6.11030144933625,0,0,0,0.134802265961354,0,0,0,3.7176277597097,2.91336455440911,3.15667522279512,8.46935012340647,0,0.063186579628488,0,0,8.64050034519341,1.98595173525299,6.27865836814451,10.7525186795663,11.0997722951619,0.693373365065693,4.5125531967134,23.3221905846219,5.57178922114576,1.7472666824203,0,1.54810130062536,2.33885814675794,2.79192553980911,117.84165503343,0,4.06765333404958,0,0,0,7.03984977845291,1.20238230377301,4.26905989478705,2.59752492456769,31.267620522441,0,0,0.288109595976299,2.85780831800495,12.9631719039237,0,0,0,0,0,0,0,0,0,0,0,0,13.9775300349294,0,0,0.134366944973453,0,0,4.25429184459008,2.63730746819733,3.23537010500087,8.16948096572415,0,0,0,0,0,0,2.0247650239635,45.654315318919,0,19.7906465683567,5.20117668174708,9.70409880497465,1.37280437475228,0.179287339332845,4.2221343410278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,14.8011154686501,8.43620559284788,5.81655928868764,7.45630299624952,0,0,0,4.46838880439127,0,0,0,0,1.57054096250234,0,0,0,0,0,0.0620964029413835,0,1.12482367165896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,0.192619830407303,0,0,0.453411851024545,0.463044948647668,0,2.68633261622231,6.79363183754139,1.53498834705095,0.883445729729405,3.08662461233464,1.01365464391844,1.53744911152768,2.41801239211839,0,0,0,0,0,0,0.491545817507439,2.74705760366215,0,0,0,0,0,9.09216800176389,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.4387819067554,14.982154865163,13.0234304950392,8.77995062742571,0,0,0,0.451261970095544,0,1.56302802246618,0.261906694481422,0.982631505060581,8.13208474193749,0,0,0,0,0,1.09651553371436,9.42801238939659,0,8.1767953689341,0,0,0,1.82129753081038,2.66107110487917,0,0,0,0,2.48207065856333,8.11989233812105,3.61068227112365,0,0,3.65263488203798,1.07963795609311,0.47775168788705,0.571812353413251,0,0,0,0,2.07216164163037,7.5116129921338,47.0056570033582,3.8720462293825,0,0,2.11693525095465,11.9135571642906,0,0,5.03349443090065,3.4352581765335,15.4835764727482,0,0,0,16.0284627709516,0,0,0,1.80713731262336,0,2.71733118420012,4.16740453782901,11.146537585701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| ||
|short_description=p1@EVPL | |||
}} | }} |
Latest revision as of 13:41, 17 September 2015
Short description: | p1@EVPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EVPL_5end |
Coexpression cluster: | C665_amniotic_esophagus_tongue_Corneal_tonsil_salivary_Urothelial |
Association with transcript: | 80bp_to_ENST00000301607, NM_001988, uc002jqi.2, uc010wss.1, uc010wst.1_5end |
EntrezGene: | EVPL |
HGNC: | 3503 |
UniProt: | Q92817 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.90e-36 | 253 |
endo-epithelial cell | 2.38e-23 | 42 |
endodermal cell | 1.05e-21 | 58 |
respiratory epithelial cell | 2.40e-13 | 13 |
epithelial cell of alimentary canal | 1.52e-11 | 20 |
epithelial cell of tracheobronchial tree | 5.00e-10 | 9 |
epithelial cell of lower respiratory tract | 5.00e-10 | 9 |
kidney tubule cell | 2.05e-09 | 10 |
nephron tubule epithelial cell | 2.05e-09 | 10 |
epithelial cell of nephron | 3.48e-08 | 15 |
epithelial cell of lung | 4.40e-08 | 19 |
kidney cell | 7.38e-08 | 17 |
kidney epithelial cell | 7.38e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.13e-24 | 106 |
cell type cancer | 8.01e-14 | 143 |
squamous cell carcinoma | 9.71e-11 | 14 |
adenocarcinoma | 2.64e-09 | 25 |