Coexpression cluster:C4300: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (6 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{Coexpression_clusters | {{Coexpression_clusters|coexpression_dpi_cluster_scores_median=0.122888501516973,0.0421882892259304,0.0572577635362959,0.11378426632396,0,0.124977670043222,0,0.135746277666991,-0.0611086170146544,0.151185078400518,-0.00491598284734374,0.0849322251609698,-0.0412044934899336,-0.172184657625336,-0.0139088576437358,0,-0.00718209219852528,0,0,0.00600390543260088,0,0,0.127781231131057,0,0.00596992052320555,0.0598237220627376,0.0667686687813178,0.0955383026235652,0.907441297213718,0.48092234970686,0.739546046780201,-0.0267248894672224,-0.0989524279467529,-0.0768040839775181,0.062557317541557,0,0.155506914481492,0.850888092139864,0.723888404697363,0.775881648348929,0,0,0.0307961677723179,0.0589565109853561,0.139210117864267,0.0943257785523457,0.229755313179946,0.160016795509819,0.346446788236214,0.555001474312268,0.446090363562068,0.526962133448222,0.574952782489624,0.302492488231696,0.406361197778012,0.195116143746414,0.166546689173743,0.320997160799854,0.583471981595219,0.466211111825445,0.426846776393512,0.220030274432855,0.34178695065463,0.357682244950033,0.671972678096584,0.507385488131579,0.370662658181871,0.654896364792545,0.557196057681449,0.629188590011392,0.451994927242335,0.506459816873773,0.554283837522878,0.213189816297791,0.54640788145371,0.264495424302979,0.193581802139666,0.24325748919447,0.256146952773715,0.330424118154027,0.299852197236831,0.23821090670904,0.213376747997446,0.00325820841145896,0.155972653859644,0.254589789027954,0.128010691493394,0.10415405413996,0.16306480656144,0.290936506658587,0.100084831552981,0.524908502418249,0.341685399560861,0.209097013302103,0.582501654230223,0.0956790493606579,0.617771349555711,0.617428770200524,0.758066274375827,0,0.437265942420558,0.460239381060654,0.256463786923157,0.159579709972967,0.378952744063977,0.358648694725073,0.233684665507476,0.133190829971417,0.16577513471036,0.0661163340840885,0.105969788764328,0.0437977317673068,0.242972225594165,0.18613148201837,0.124393874220388,0.057498730751691,0.36101487054896,0.417425085899828,0.309681145003396,0.120101680109954,0.122933271085683,0.0939399248938303,0.161884462700249,0.0829162736519717,0.0291184046853161,0.0804298762903362,0.308512553289937,0.795308131940447,0.650960178853217,0.621813425534263,-0.0737732301097855,0,-0.0825171605293122,0.133998235926338,0,-0.0666429539709592,-0.0496155728271723,0.278708508922641,0,0,-0.052108881032648,0.0274418973288244,-0.0554017338848166,-0.0489815563183538,0.12206750241012,0.161630007120081,0.0157486255271355,0.234383601705801,0.331222719243351,0.13718235424895,-0.254581509367353,-0.191831557975005,-0.302533253454588,-0.359898454474896,-0.309821638969338,-0.286808201983053,-0.162959983544512,-0.18890149212498,-0.297870411016168,-0.145041513371049,-0.195239775986157,0,-0.281307818826846,0,-0.170973046159443,-0.133313060224404,-0.156669407155546,-0.146858360245826,0,-0.0149520028459643,-0.129440801163982,0.81614634666651,1.30939620719332,-0.111500122759371,0,-0.0161552529120845,-0.193100116045373,0.109523411542048,-0.0651046466914086,0,-0.344506348892278,-0.106716028913317,-0.260854745800267,-0.00870769868039745,0,0.0843911362210599,0.057661030750026,-0.079963517741713,-0.149279606482298,-0.253671981055018,-0.122317745771018,-0.0675217439707226,0,0,-0.21294804397301,0,-0.250443112220738,0,-0.00103545995618948,-0.102249236831773,-0.179040936502513,0,-0.0708378622491295,-0.160504103111409,-0.127462215578094,0.116105357238318,-0.0138961752515914,0.0516835958668631,-0.0358054709690593,0.0361996873848862,0,-0.189600347680126,-0.0922054807977473,-0.19012479232269,-0.0743997903032874,-0.23457759546442,0,-0.0413241013986052,-0.045272022472937,-0.0736311491908728,-0.039670702077126,0.0428997995617393,0,0,0.117080970577984,-0.19174689074742,-0.0714414746683135,-0.0599824409382281,-0.0357694790467185,0,0.00293665787859254,-0.135472935566165,0,-0.153109568903617,-0.140698705352544,-0.0837455694446536,-0.00982951376964236,0,-0.0552351037514383,-0.034407467396562,-0.019555713477137,-0.100023997327621,-0.0638451196921507,0.046101143051849,0.0441408656010089,0,0,0.0333986160317328,0,-0.189699708706494,0,0.151138517101525,0.183026230528746,0,0.0267306379333605,0,-0.244462785917601,-0.20005573353603,0.0420629343343498,-0.15708932615571,0.0415193663898648,0,-0.0897689509607282,0,-0.050738820535407,-0.0332363732329812,0.0293702292191496,0,-0.333597158598926,-0.332474535907302,0,0.0814592713918572,-0.0559720076879875,0.258988062835258,0.14003868153772,0.108412856849701,0.0715569176063761,0.0448790576678474,-0.238410697756204,1.10802072250707,0.200926506191264,0.567645647581766,0.638001815853801,0.577185334358857,0.0777628463888105,0,-0.185936845388924,-0.218725976210738,0.0359539942156826,0,0,-0.0930626010768119,-0.0167793316746649,-0.128237216125157,-0.000573207649689822,-0.180201528048043,-0.0086238293685701,-0.0483005347283898,-0.00755938113934729,0,0,-0.0806507155692582,0.0468742592675198,-0.191087378414471,-0.066995464383156,0.053600424709316,0,0.00810185696730015,0.02437630749116,0.0105621451406775,-0.0912685896584107,0,0,0.327027468090392,0,-0.183351752036371,-0.163165571584103,0.0901380575394175,-0.086686985911347,-0.000411888532573901,0.0076080042314246,0.863619288451218,0.580144422332684,0.674121204935656,0,0.164001013064787,0.232098356093408,0.0672629396841865,0.0632884461384322,0.554573203543352,0.246657694531212,0.67483723285021,-0.153324163743729,-0.456073864201164,-0.0508452772970966,-0.13409133548056,-0.244271303795766,-0.256563334449229,-0.204520195170456,-0.232063808563902,-0.102489638492211,0.00880732016044061,-0.123888106316294,-0.105314248784738,-0.0597581295717825,-0.132165192884418,0.108272933326181,0.308316812342537,0.659377529301249,0.29237748405828,0.157827300885291,0,0,0,-0.184678825632047,0.107433877051114,-0.0721557154656786,-0.108937585358077,0.0647775726819609,-0.0189631518895612,0,-0.0395534527109017,-0.0394895199417657,0,0.085470832643163,0.09680483491659,0,-0.00504598477520157,0,0.0375038049719898,-0.0958440972156043,0,0.0322218878591601,-0.16324531214467,0,0,-0.0155312728668079,-0.0380648753414079,-0.057323459747822,-0.229597420774391,0,-0.105481607610653,0.0696984197752942,0,-0.0603392078275222,0.492601572038259,0.507158000685837,0,0,-0.148358287055268,0.051786176441015,-0.120848162103793,-0.076211930184424,-0.0613555377591462,-0.0483156627413989,-0.07851114680826,-0.291951608619791,-0.0247816828595472,-0.0159883172019779,0.0887071016164567,-0.1256248386685,-0.167697909520472,-0.0923795658447535,-0.168361344756934,0,0,-0.205465461307479,0,-0.126108797302825,0.118863773699242,-0.00537186644189558,-0.170735149715269,-0.142548509693989,-0.163979903851909,-0.133632496725161,0.104519119510227,0.0810074751927496,0.0239308888879151,-0.0289888271168119,-0.0537545333175846,-0.0790428744205542,-0.218816359544238,0,0,0,-0.0461164619952439,-0.199374876220328,0,-0.0586196859036492,0,0.0247508133250331,0.0845743858110124,0.00472877974568531,-0.185660769447359,-0.0339905801084357,-0.115091561757992,0.0846087495133399,-0.109595016289267,-0.00901493134930087,-0.377767907710035,-0.103228172108859,0.085383307412127,0.107784894264258,0,0.0407008327132364,-0.0494255607801186,0.168870709602245,0.0552787327515278,0.0577203837422786,-0.0166133405487132,-0.311979280153737,-0.0983050144233206,-0.139880518492366,-0.205043789102852,0.121714162051884,0.141987132069391,0,-0.0928344521878715,0.104264156642435,0.456395259326081,0.585286158021872,0.34227747144069,0.288474605066552,0.195596075995327,0.304457607702583,0.507719313091474,0.425225925454431,-0.0610918630442008,-0.225013347280948,-0.170903460716935,0.0748304904428023,0.110097374326945,-0.840741111600036,0,-0.218188290467826,0.149948298999536,0,0,-0.147923011735035,-0.132471159480942,0.0632131871850751,-0.295886494554744,-0.182240589872054,-0.126806424847246,-0.235759955665494,-0.345303461474041,0,-0.0687237943075488,-0.0683552650792084,-0.0621938023399167,-0.167501377714231,0,-0.0446866722188819,0,-0.344540454595963,0,0.00364268968350179,-0.0470840686875933,-0.322727038333173,0.207940389003449,-0.0656947834302544,0.141294880517861,0.168110414358366,0.340429536703355,0.00986969222438039,0.152902115792725,-0.0294981743929104,0.0662528064680222,-0.112980556399224,0.130925032654482,-0.0645405640018296,-0.00858659997912059,0.148876327057361,0.075878833105407,0,-0.169263383703244,-0.0372500521500363,-0.0922312573304587,0.0573634171426669,0.621197143823714,0,0.101498270351624,0.107829460995045,0,-0.178667848584913,-0.0737937608796218,0,-0.171784003433518,0,-0.386374049935616,-0.0292374480536008,-0.091980409613228,0.0176257754058697,0,0.21983716267553,0,0,0.112453380477913,0.289148783804349,0.00408662708525021,0.182241569437408,-0.0445755124402036,0.0206028771299998,-0.0741913054304433,0,0.111600195619579,0.366472658139811,0.0652173798212282,0.275004147272035,0,-0.0609016994744445,-0.0178412882709842,-0.251020650918391,-0.273024669497401,-0.174188810102459,-0.0815385269902095,-0.25405723533856,-0.053855899812919,0.416156976088681,0.174740763945045,0,-0.183436882374091,0.00406899409755046,0,0.503691980378913,0.427330789772441,0.38872042500114,0.102804578104502,0.0296991498859319,0.232714934150653,-0.177619101546988,-0.204624628416236,-0.0915594387728649,0.225600758534494,0,-0.149543495131021,-0.0264986652111876,0.114159389744683,-0.0484111002486589,-0.0884946161663258,-0.0461224637757986,-0.0388670257480013,-0.0333437197231203,0,-0.0816264260261395,0.00843725462897305,-0.245270030814208,-0.189233577091201,0.178382264740075,0,0.0401101501533233,0.0194125159762661,0,-0.000421928791723092,-0.44273958447659,0.097945954150153,0,0,0.0980353512377064,-0.174689712736869,-0.150294991836877,0.0394925588385979,-0.0168035406593248,0,0,0.0552419512350697,0,-0.115087623690728,-0.0877421319989662,-0.137252458261504,-0.21208236262631,-0.180830839902127,0.180576765085931,0.0800530909623614,0.211102004164236,-0.483289232188968,-0.0960364231423612,0.101364614532639,0.155870548021587,0.223381034510741,0.117738710338916,0.264972538218111,0.443873532695985,0.323761659984885,0.208709185693092,0.0538904636906379,0.258849611023287,0.0329341673988529,0.0714904960719481,0.0549220396220714,-0.0471842389990033,0.0679432810511184,0,0.230496999400831,-0.00905600963349884,0.0241740599381118,0,0.568164948169043,0.406131906607941,0.0934388033053124,0,0.175284151081338,-0.0519304171515254,-0.386665772222193,-0.147197252966935,0,0.249528653403021,0.45858998506733,-0.233155020734017,0.000857366301824092,0.175872443060932,-0.093024528445896,-0.413369071710952,0.138699001845282,-0.0542657631596615,-0.0554793366927648,0.209836224552811,0.093685688819539,0.0371098494223487,0.245673175496719,0.137282373789791,-0.443468253880326,0.0952418926831797,-0.0173089455880555,0.0406082918662085,0,0.144643709026244,-0.00530137972875266,-0.246789661219158,0.0662524937256478,0.0741696360178077,0,0.107130758840457,0,0.112274648553599,0.0252723154923828,0.123548577683527,0.141581597455795,0.208689071863309,0.143922348430178,-0.178260513566411,-0.145762801448695,-0.0964893276647574,0.040755706072005,0,0.0184130090820707,0.0184935385394164,0.137970748006843,0.418073730506348,-0.0415728049805293,0.210410449794624,0.182905544142903,0,0.533060684071138,0.162472630847561,0.271958580283103,0.191008186473658,0.188164069543453,0.276948448510486,0,0,0.204659530609824,0.0785687623335073,0.185239719701493,-0.0151564922751299,0.120082222433024,0.22852249965908,0.40305489986576,0,-0.00379456249022336,0,-0.0723141118796766,-0.159610931054138,-0.0595010331502566,-0.0210484411049274,-0.0835186067062612,-0.177782656318121,-0.302529871265148,-0.199390794097277,-0.194698905764908,-0.226307076582896,-0.230942020942231,-0.0755011710476498,-0.114504389017158,-0.0477419026581158,-0.313288393941351,-0.171455646026892,-0.0921893344470004,-0.152511102287754,0.0869348724189162,0.258461724698728,0.0646141295157078,0.0460981030189807,0,0.122409863828635,-0.25633920580812,0.205414480495926,-0.0246344343151573,0.269270285586648,-0.0972213418662111,0,0,-0.0784613976184891,0,0.00671984042227747,-0.126938590682267,0.00476188050798365,-0.0324328244880259,-0.130206366301617,-0.0393896941200351,-0.280742407292845,-0.24826383796248,0.0473977143287709,0.318830670445007,0.31345124350673,0.012038243612395,0.193769890773524,0.297646601079982,0.136116458978114,0.0810289837637627,-0.0596010816610809,0.0689858742739792,0.0650101077405693,0,-0.121463565796247,-0.00962795761202795,-0.15156914543435,0,-0.135671862940853,0,0.28416494880577,0,-0.117318386937808,0.366328856399179,-0.0456864197773716,0,-0.105487023170076,0.0586153382498673,0.250682963288844,0.119567497863716,0.119611842060913,0,0.473355687167843,0,-0.0811847931191045,0,0.536053045429086,0.591290959354695,0.350078998845679,0.040198382068195,-0.039273095743857,-0.0413479379730869,-0.062080609768741,0.0660706504074589,0.0536720399233067,-0.0320632239348984,0.0505239494063052,0,0.217756754726794,-0.101615583517024,-0.389520173075297,-0.0940376733070138,0.0712829060645016,0.236114469653092,0.11632448747695,0.0113728226309837,-0.266035075863104,-0.115232305606343,-0.33021422974869,-0.0661631419472988,-0.0624429512341109,0.298548489867168,-0.0683658991120988,-0.205341987794513,0,0.344306989826494,-0.0729595432341144,-0.0427695264979924,-0.0190281073668495,-0.00423208952392873,-0.220619007436931,0.162320114207796,0.227567964171752,0,0,0.0912938539198686,0.0892897759548896,0,-0.110416232232463,0,0.228810928787016,0.0281330487916385,0.0423497118368241,0.260478130171028,0.00414913171529596,0.0908006352859766,0.0598913865834307,0.243648450491079,0.139997748698366,-0.0064964005689081,0,0,0,-0.103242465521267,-0.00017696380566834,-0.120350871718505,-0.00551417616308214,0.146219454844157,0.291849942599565,0.0281439994219543,0.0386830977144708,0,0.0181014732891318,0.0342606381905635,0,-0.0478433370023015,-0.0502572580221399,-0.0246065588862423,0.032092222947423,0.0924639887852274,-0.000949070267705077,0.139820385221311,0,0.0317229404497622,0,0.225038121861306,0.230735126096272,0,-0.0294690162211971,-0.214457679363798,-0.102803058707005,0.124880285928899,0.293628698604523,0.279715933683117,0.040734492402092,0.139579009599552,0,0.0890636665626214,0.140725060276758,-0.0200914278483388,0,0,-0.07978661122195,0.250215718304184,-0.011736759224497,0,0,0.0189667170565717,0.12076093114532|full_id=C4300_Basophils_Eosinophils_Mast_CD14_CD34_CD4_CD8|gostat_on_coexpression_clusters=GO:0017182!peptidyl-diphthamide metabolic process!0.00147180030613446!285381$GO:0017183!peptidyl-diphthamide biosynthetic process from peptidyl-histidine!0.00147180030613446!285381$GO:0051099!positive regulation of binding!0.00220770045920169!285381$GO:0050709!negative regulation of protein secretion!0.00220770045920169!285381$GO:0018202!peptidyl-histidine modification!0.00323796067349582!285381$GO:0051048!negative regulation of secretion!0.00417010086738098!285381$GO:0050708!regulation of protein secretion!0.00515130107147062!285381$GO:0051098!regulation of binding!0.00515130107147062!285381$GO:0009306!protein secretion!0.00868362180619334!285381$GO:0051046!regulation of secretion!0.00868362180619334!285381$GO:0018193!peptidyl-amino acid modification!0.0161898033674791!285381$GO:0032940!secretion by cell!0.036427057576828!285381$GO:0046903!secretion!0.0434747167350488!285381|id=C4300|ontology_enrichment_celltype=CL:0000738!1.37e-36!136;CL:0002031!3.67e-30!120;CL:0002087!7.55e-27!115;CL:0000037!4.75e-23!168;CL:0000566!4.75e-23!168;CL:0000988!1.00e-22!177;CL:0000766!1.04e-22!72;CL:0002032!6.12e-21!161;CL:0000837!6.12e-21!161;CL:0000860!1.07e-20!42;CL:0002057!1.07e-20!42;CL:0000839!3.48e-19!66;CL:0000473!5.59e-19!48;CL:0000234!5.59e-19!48;CL:0000557!4.18e-18!67;CL:0002009!1.49e-16!61;CL:0002194!1.58e-15!59;CL:0000576!1.58e-15!59;CL:0000040!1.58e-15!59;CL:0000559!1.58e-15!59;CL:0002242!3.57e-11!55;CL:0000763!4.17e-11!108;CL:0000049!4.17e-11!108;CL:0000542!3.01e-10!53;CL:0000051!3.01e-10!53;CL:0000838!3.66e-10!52;CL:0000325!4.53e-09!87;CL:0000134!5.24e-09!354;CL:0002320!6.12e-08!361;CL:0000791!2.39e-07!18;CL:0000789!2.39e-07!18;CL:0002420!2.39e-07!18;CL:0002419!2.39e-07!18;CL:0000790!2.39e-07!18;CL:0000219!5.89e-07!386|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0002390!4.56e-23!98;UBERON:0003061!4.56e-23!98;UBERON:0002193!2.35e-18!108;UBERON:0002371!9.85e-18!76;UBERON:0001474!3.38e-16!82;UBERON:0007023!4.88e-15!114;UBERON:0004765!4.30e-14!90;UBERON:0001434!1.42e-12!100;UBERON:0002405!4.46e-12!93;UBERON:0000178!4.12e-09!15;UBERON:0000179!4.12e-09!15;UBERON:0000463!4.12e-09!15;UBERON:0001049!1.51e-07!56;UBERON:0005068!1.51e-07!56;UBERON:0006241!1.51e-07!56;UBERON:0007135!1.51e-07!56;UBERON:0000073!5.57e-07!53;UBERON:0002616!5.57e-07!53;UBERON:0002384!6.68e-07!371|tf_chipseq_enrich=ATF3#467;3:22.4631745260087:8.81932387510763e-05:0.00129894424790913!BCLAF1#9774;2:14.4350984067479:0.00620114743554613:0.0273936907630912!BRCA1#672;2:13.4561537621492:0.00711980771608456:0.0296367316883282!CCNT2#905;3:6.33620157696263:0.00393075003576489:0.0190604328621622!E2F1#1869;3:4.90738921487932:0.00846098534723939:0.0326602915686108!E2F6#1876;3:5.01715573169739:0.0079176980688633:0.0323405869847868!EGR1#1958;3:4.98817909481014:0.00805648813738344:0.032161591796506!ELF1#1997;3:4.25809795880754:0.0129517987505461:0.0463768268834053!ELK4#2005;3:16.235681658468:0.000233604395574599:0.00256113893233419!GABPB1#2553;3:7.06768383618217:0.00283221282541742:0.0154542045597581!GATA1#2623;3:13.5603081438004:0.000400961596378263:0.00388748868957941!IRF1#3659;3:7.6371637535639:0.00224469274729724:0.0128456693608206!JUN#3725;3:12.5128291923363:0.000510331399272625:0.00445341753080161!MAFF#23764;2:37.5435709932968:0.000934477401556032:0.0067709092091793!MAFK#7975;2:18.0671554252199:0.00398367474493681:0.0191155987450703!NANOG#79923;2:19.4965189873418:0.00342725564850102:0.0174553375925972!NFE2#4778;2:51.469507101086:0.000498765352839211:0.00440698432192677!NFKB1#4790;3:5.48806342419384:0.00604938181565543:0.027028508553807!NFYA#4800;2:12.2837204665537:0.00851601140372443:0.0324872599259808!NFYB#4801;2:11.1731955023576:0.0102546713505453:0.0381473774240284!PAX5#5079;3:6.66956553117783:0.00337029099967726:0.017336837990213!SETDB1#9869;2:26.880017452007:0.00181446890796441:0.010897143086768!SIN3A#25942;3:5.40888472681514:0.00631896197799152:0.0277638228868093!SIX5#147912;3:17.086715355459:0.000200406054632501:0.00240107926348099!SMARCB1#6598;2:12.1684771874383:0.00867500222192174:0.033003371596069!SP1#6667;3:5.6983813781409:0.00540396270171217:0.024727675280587!SRF#6722;3:13.7971782621678:0.000380661502580019:0.00375835759765122!THAP1#55145;3:31.3691446028513:3.23800758564397e-05:0.000648340249687635!YY1#7528;3:4.91117074985386:0.00844145534180826:0.0330404060429154|tfbs_overrepresentation=0.147255,0.0586687,0.716932,0.0477154,0.199763,0.287811,0.0430074,0.414564,0.03272,0.0257057,0.139423,0.225367,0.188771,0.125978,0.148679,0.0619003,0.140982,0.0982016,0.0528514,0.108057,0.188635,0.132577,0.081977,0.0948982,0.0415721,0.215492,0.209392,0.0907212,0.143747,0.0933697,0.204953,0.114046,0.0180314,0.208242,0.0665252,0.0844722,0.688181,0.0429682,0.120351,0.0667043,0.0964797,0.0246116,0.140039,0.184019,0.120917,0.0362416,0.0380166,0.0175714,0.111283,0.121201,0.154071,0.0541794,0.0701653,0.0929951,0.198787,0.0384161,0.107455,0.212709,0.00315066,0.105572,0.0294301,0.149417,0.108602,0.0759481,0.054569,0.0504887,0.352278,0.0600088,0.0860723,0.167053,0.378921,0.067678,0.00408688,0.119383,0.00747605,0.0171177,0.0964936,0.0436945,0.0372495,0.00725252,0.0956287,0.226912,0.0425,0.00686288,0.291327,0.251834,0.064341,0.209032,0.608896,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,0.0853887,0.115028,0.21992,0.153631,0.0927458,0.27413,0.0574857,0.276221,0.141874,0.0370665,0.219088,0.0409286,0.0669887,0.338096,0.144217,0.269326,0.182599,0.0339971,0.149552,0.0176855,0.101221,0.0337525,0.0203386,0.0566549,0.139021,0.0838393,0.16671,0.214708,0.140123,0.0857827,0.102368,0.176912,0.0906875,0.0147934,0.00366285,0.134932,0.0595773,0.0748346,0.0572164,0.0227861,0.125792,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,0.203923,0.155998,0.596561,0.0693171,0.0988228,0.0842275,0.0389418,0.120833,0.0216297,0.143677,0.180712,0.0265818,0.0427088,0.117549,0.0747594,0.228385,0.0516985,0.0337251,0.227719,0.0952829,0.116642,0.147788,0.273479,0.114283,0.0400322,0.127369,0.0403542,0.312091,0.179689,0.137725,0.46397,0.0541353,0.0799324,0.090079,0.140334,0.181817,0.178449,0.0356339,0.158844,0.122474,0.0274061,0.115574,0.0737247,0.118847,0.183031,0.0401756,0.0828697,0.173562,0.107145,0.187297,0.122935,0.228812,0.112671,0.0470731,0.0782523,0.0602859,0.0676496,0.109673,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.259411,0.27358,0.15185,0.206299,0.178359,0.0458667,0.104357,0.121154,0.1129,0.312578,0.169057,0.164202,0.100942,0.062995,0.00549554,0.14193,0.37245,0.15606,0.161026,0.0738599,0.126611,0.138852,0.085973,0.060453,0.059896,0.569726,0.384785,0.0418404,0.0765029,0.0959204,0.0931946,0.0472272,0.263087,0.163502,0.214803,0.182472,0.348993,0.0983991,0.0830921,0.116283,0.136838,0.0815104,0.111647,0.372804,0.117027,0.159052,0.185164,0.185743,0.0980288,0.0980899,0.159674,0.107242,0.201859,0.0695832,0.582402,0.0619218,0.1751,0.163376,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.118078,0.0755168,0.278352,0.063292,0.254773,0.446759,0.0865903,0.0380459,0.130174,0.219944,0.713218,0.451377,0.635872,0.563047,0.823736,0.807281,0.335423,0.629514,0.261553,0.446302,0.373681,0.309233,0.49143,0.0619618,0.395854,0.329568,0.178727,0.615744,0.271958,0.292154,0.405773,0.39729,0.217139,0.0643874,0.187251,0.362792,0.181715,0.423979,0.109988,0.330894,0.218329,0.427027,0.376924,0.463191,0.280025,0.528324,0.520763,0.370782,0.415647,0.484505,0.253571,0.276829,0.301787,0.481778,0.316882,0.223503,0.155672,0.603208,0.283727,0.314747,0.577664,0.291709,0.120054,0.212757,0.416816,0.292835,0.476744,0.439556,0.373868,0.57762,0.608919,0.18237,0.346458,0.821217,0.400457,0.275351,0.236471,0.185661,0.346319,0.535598,0.270984,0.625945,0.503058,0.513852,0.522083,0.248634,0.281576,0.472384,0.163244,0.0670502,0.0730934,0.184794,0.596648,0.762864,0.581837,0.412837,0.102184,0.546839,0.551561,0.448039,0.218623,0.312808,0.695172,0.0451077,0.0747529,0.229003,0.650179,0.589326,0.50215,0.294698,0.34331,0.477304,0.0465597,0.327108,0.683186,0.278044,0.490301,0.428671,0.228096,0.336314,0.19763,0.15631,0.567452,0.421464,0.48267,0.420626,0.516462,0.858756,0.335105,0.144809,0.145539,0.385517,0.376191,0.447325,0.459928,0.252232,0.152681,0.0465712,0.137098,0.259235,0.134788,0.0985856,0.546222,0.293698,0.284593,0.343734,0.306556,0.305777,0.2348,0.155572,0.169823,0.284629,0.262537,0.359455,0.226257,0.405955,0.41707,0.363685,0.464871,0.40841,0.206222,0.525396,0.651524,0.437176,0.269226,0.339277,0.552319,0.281425,0.141758,0.124432,0.520495,0.159617,0.238587,0.372281,0.232251,0.189515,0.0891382,0.0595618,0.524997,0.625309,0.347298,0.539392,0.0699395,0.475069,0.404569,0.273024,0.630264,0.316179,0.0697683,0.0556835,0.0198561,0.0779981,0.0575676,0.144322,0.223391,0.203656,0.442884,0.441735,0.191777,0.111931,0.28934,0.0435386,0.303336,0.126478,0.134852,0.10689,0.273326,0.0627924,0.381386,0.0179103,0.303939,0.279795,0.0140073,0.0464827,0.169603,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,0.210369,0.193675,0.346372,0.0499762,0.0828956,0.0666953,0.182185,0.111277,0.219383,0.332809,0.19559,0.132201,0.188694,0.0481795,0.199971,0.406014,0.127758,0.175785,0.184486,0.169234,0.0876426,0.0952322,0.0112557,0.222432,0.107043,0.275244,0.00481323,0.173708,0.141119,0.211595,0.0300692,0.131551,0.0445237,0.052362,0.208866,0.153187,0.0797897,0.0974211,0.160149,0.123526,0.0906475,0.0558058,0.28262,0.517717,0.137332,0.0145999,0.0656973,0.211746,0.220538,0.0801488,0.0757897,0.161801,0.193215,0.0549034,0.0779715,0.0561838,0.0417636,0.0345419,0.0388736,0.254674,0.170307,0.201033,0.0488949,0.174921,0.370421,0.0330727,0.348757,0.219556,0.0394698,0.0596469,0.419264,0.122476,0.108872,0.11002,0.26144,0.0286025,0.549354,0.144567,0.038848,0.0874516,0.0550279,0.144067,0.253693,0.217069,0.190048,0.131088,0.394069,0.237101,0.0458068,0.0761239,0.172491,0.0818785,0.182701,0.335058,0.147698,0.141463,0.167267,0.140622,0.0889592,0.309588,0.28711,0.0473033,0.094881,0.445524,0.132886,0.0774373,0.109194,0.128564,0.131452,0.687347,0.448776,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.0936516,0.144075,0.0340203,0.0741807,0.277091,0.739716,0.288159,0.21727,0.289306,0.119215,0.192475,0.177967,0.547859,0.057571,0.047591,0.392974,0.0608699,0.175319,0.300597,0.0713214,0.223874,0.291114,0.0355833,0.125606,0.175094,0.43617,0.519327,0.206454,0.218192,0.108277,0.0673484,0.108748,0.0494066,0.0958493,0.205732,0.0755808,0.045654,0.110216,0.070276,0.226171,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.172425,0.104948,0.221645,0.057168,0.234298,0.0759837,0.286863,0.152372,0.194941,0.218271,0.101607,0.327067,0.172982,0.340936,0.151597,0.0626744,0.191335,0.148574,0.504592,0.155821,0.0718905,0.0919008,0.0602373,0.144304,0.15063,0.0973823,0.15503,0.170295,0.193653,0.137219,0.228144,0.251466,0.288096,0.00738316,0.0838874,0.331451,0.113145,0.112651,0.186638,0.174776,0.0948451,0.264079,0.249049,0.140533,0.0997756,0.257598,0.103667,0.113069,0.025556,0.16791,0.09066,0.585505,0.166967,0.188651,0.0813902,0.184948,0.156261,0.311847,0.511859,0.0590944,0.247324,0.178389,0.218229,0.231073,0.407281,0.252227,0.0360851,0.412187,0.131093,0.0434602,0.133616,0.418146,0.36927,0.449036,0.407369,0.231447,0.544776,0.43956,0.37006,0.42622,0.448797,0.197484,0.396996,0.36145,0.406019,0.381071,0.580441,0.643768,0.432035,0.722159,0.390366,0.48809,0.50058,0.117158,0.522904,0.158867,0.60734,0.227104,0.518585,0.617852,0.38649,0.284625,0.504757,0.55194,0.375373,0.0465139,0.164197,0.462688,0.0461094,0.574635,0.478174,0.336276,0.468444,0.258219,0.446557,0.243383,0.442897,0.390974,0.73485,0.683217,0.161598,0.405056,0.644754,0.150692,0.21803,0.37357,0.454657,0.477353,0.199161,0.746954,0.771991,0.20342,0.200493,0.20558,0.300504,0.25656,0.425963,0.349197,0.383291,0.156104,0.141318,0.0997241,0.0961477,0.314438,0.354789,0.163828,0.230581,0.120226,0.28424,0.562405,0.314429,0.0175523,0.282286,0.78,0.0727621,0.408413,0.00654592,0.322213,0.656109,0.33942,0.61031,0.387276,0.522605,0.802166,0.537348,0.222037,0.416621,0.416292,0.462712,0.734551,0.579431,0.204817,0.452428,0.138871,0.673493,0.166905,0.19783,0.0833851,0.316453,0.140384,0.175199,0.332919,0.373557,0.523625,0.408861,0.365487,0.534741,0.39088,0.363192,0.236011,0.203486,0.273398,0.375787,0.119167,0.351067,0.275347,0.637444,0.305885,0.0317395,0.371414,0.30666,0.303709,0.495883,0.386538,0.159081,0.250964,0.383276,0.457886,0.156714,0.220231,0.509064,0.196976,0.191517,0.463751,0.601877,0.307334,0.459728,0.283463,0.201728,0.472935,0.399569,0.273281,0.368095,0.275089,0.384593,0.138622,0.359231,0.339729,0.197805,0.608187,0.387069,0.332774,0.52832,0.299887,0.634365,0.0227114,0.17639,0.0779009,0.276869,0.205298,0.0337138,0.18966,0.258854,0.188263,0.0719199,0.264884,0.0139948,0.19104,0.163057,0.219428,0.208013,0.0900729,0.0953646,0.166124,0.252184,0.378361,0.255516,0.20753,0.447185,0.179412,0.193601,0.220904,0.222977,0.341681,0.0542164,0.21801,0.198614,0.186804,0.123324,0.199468,0.0325925,0.0933115,0.12405,0.0172483,0.226869,0.0430576,0.0855609,0.131118,0.0233967,0.247588,0.222339,0.0673329,0.20847,0.266544,0.113092,0.145701,0.229428,0.162145,0.228955,0.168748,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.201602,0.350452,0.154941,0.120196,0.0986735,0.108462,0.0595618,0.21593,0.158479,0.220319,0.195218,0.124213,0.259632,0.30793,0.180606,0.159884,0.257294,0.150733,0.217112,0.123917,0.184317,0.185335,0.0723291,0.258496,0.261744,0.203781,0.0246892,0.207559,0.141867,0.193031,0.249101,0.115972,0.224568,0.246105,0.173026,0.200432,0.139785,0.197112,0.240478,0.156465,0.13108,0.256963,0.222798,0.172134,0.176789,0.0969345,0.0219648,0.310405,0.280943,0.218161,0.0822373,0.202065,0.106739,0.0536053,0.0537737,0.15113,0.00312563,0.0407233,0.0537355,0.319922,0.261724,0.211332,0.187731,0.233626,0.189559,0.0812887,0.0981146,0.064145,0.0077532,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,0.04411,0.066952,0.089609,0.0367455,0.13497,0.204393,0.0488311,0.286691,0.347036,0.141729,0.263159,0.255956,0.200105,0.227491,0.29837,0.253509,0.177664,0.28365,0.264413,0.131761,0.160658,0.206239,0.19924,0.28689,0.236464,0.325148,0.115817,0.0257187,0.223831,0.11528,0.0203812,0.190993,0.281727,0.283218,0.249955,0.164638,0.224257,0.0935776,0.327622,0.225752,0.207791,0.0958756,0.0859274,0.316866,0.171683,0.158847,0.271275,0.071111,0.270604,0.101021,0.222548,0.175934,0.157274,0.215705,0.252796,0.205954,0.361435|tfbs_overrepresentation_for_novel_motifs=1.66899,0.14394,0.690871,0.855819,0.641468,0.853988,0.937929,0.494933,0.491742,0.63186,0.820209,0.985163,0.436625,0.925331,0.639839,0.667627,1.17594,0.575162,0.452865,0.305559,0.69094,1.26332,0.845342,0.635379,0.743951,1.00973,0.409304,0.842925,0.645155,0.388328,0.795576,1.21459,0.534793,0.439574,1.46099,0.427404,0.596053,0.855276,0.567465,2.05816,0.598234,0.777097,1.32383,0.63803,0.461452,0.726632,0.939121,0.808003,0.69206,0.645308,1.02504,0.951993,0.336258,1.29475,1.45259,0.928548,0.650353,0.892517,0.388177,0.891404,1.25741,0.941709,0.492369,1.14672,0.961293,1.11026,1.54311,1.91674,1.2037,1.75271,0.762094,1.25415,0.333216,1.45054,0.430728,1.06461,0.396746,1.12884,1.20029,0.73687,0.459024,2.58159,0.960908,0.498519,1.39759,0.507157,0.303648,0.381882,1.053,2.0169,1.63834,1.36973,1.23218,0.543775,0.642354,0.560075,0.450952,1.27663,1.05794,0.360456,0.569121,1.22626,1.27082,1.1798,1.09802,0.815119,1.16312,0.921547,0.743661,0.622396,0.703975,1.26794,0.684398,0.830777,1.58942,0.594137,0.188952,0.794219,2.50498,1.35006,1.44203,1.0504,0.850918,0.973172,1.70203,1.12965,0.930979,1.2374,1.48578,0.561252,1.37044,0.798812,1.50051,0.969553,1.65144,1.73097,1.8537,0.843556,1.60823,2.47382,2.06967,1.57016,0.932872,1.27296,2.48899,0.883164,1.08214,2.31409,0.773313,0.539692,0.853445,0.250511,1.37083,0.481626,0.941179,1.78371,1.03563,0.624795,0.744018,0.710709,1.56892,1.35169,1.19946,1.69998,1.11698,0.960047,0.524529,0.936473,0.265282|tfbs_overrepresentation_jaspar=MA0003.1;0.401049,MA0004.1;0.826076,MA0006.1;0.639288,MA0007.1;0.804807,MA0009.1;1.3275,MA0014.1;0.377374,MA0017.1;0.686276,MA0019.1;0.990656,MA0024.1;1.21731,MA0025.1;1.46617,MA0027.1;2.95767,MA0028.1;0.658629,MA0029.1;1.23771,MA0030.1;1.22561,MA0031.1;1.15713,MA0038.1;0.94098,MA0040.1;1.24388,MA0041.1;0.847069,MA0042.1;0.810843,MA0043.1;1.32783,MA0046.1;1.31611,MA0048.1;0.341392,MA0050.1;0.81185,MA0051.1;0.936307,MA0052.1;1.24796,MA0055.1;0.190716,MA0056.1;0,MA0057.1;0.333427,MA0058.1;0.716037,MA0059.1;0.714521,MA0060.1;1.23283,MA0061.1;0.456531,MA0063.1;0,MA0066.1;0.941452,MA0067.1;1.65513,MA0068.1;0.405474,MA0069.1;1.31207,MA0070.1;1.30033,MA0071.1;0.897953,MA0072.1;1.29561,MA0073.1;0.0185922,MA0074.1;0.935474,MA0076.1;0.734647,MA0077.1;1.28751,MA0078.1;1.04495,MA0081.1;0.714712,MA0083.1;1.33535,MA0084.1;1.84562,MA0087.1;1.29304,MA0088.1;0.257905,MA0089.1;0,MA0090.1;0.751469,MA0091.1;0.829044,MA0092.1;0.785956,MA0093.1;0.642957,MA0095.1;0,MA0098.1;0,MA0100.1;0.956299,MA0101.1;0.646932,MA0103.1;0.628063,MA0105.1;0.31555,MA0106.1;0.986396,MA0107.1;0.556367,MA0108.2;1.15387,MA0109.1;0,MA0111.1;0.767139,MA0113.1;1.00436,MA0114.1;0.549955,MA0115.1;1.57693,MA0116.1;0.560723,MA0117.1;1.36676,MA0119.1;0.695578,MA0122.1;1.39371,MA0124.1;1.53432,MA0125.1;1.44766,MA0130.1;0,MA0131.1;1.06461,MA0132.1;0,MA0133.1;0,MA0135.1;1.35921,MA0136.1;0.948776,MA0139.1;0.440097,MA0140.1;0.894983,MA0141.1;0.712476,MA0142.1;1.12317,MA0143.1;1.00455,MA0144.1;0.531867,MA0145.1;0.273764,MA0146.1;0.348055,MA0147.1;0.565108,MA0148.1;0.854239,MA0149.1;0.884158,MA0062.2;0.449458,MA0035.2;0.894194,MA0039.2;1.15986,MA0138.2;1.04628,MA0002.2;1.20011,MA0137.2;0.666381,MA0104.2;0.491226,MA0047.2;0.973066,MA0112.2;0.264678,MA0065.2;0.277623,MA0150.1;1.76247,MA0151.1;0,MA0152.1;0.902317,MA0153.1;1.43021,MA0154.1;0.312019,MA0155.1;0.256269,MA0156.1;0.669101,MA0157.1;1.09377,MA0158.1;0,MA0159.1;1.38935,MA0160.1;0.871361,MA0161.1;0,MA0162.1;1.43223,MA0163.1;0.387745,MA0164.1;1.01792,MA0080.2;0.643061,MA0018.2;0.987913,MA0099.2;0.902716,MA0079.2;0.0373086,MA0102.2;1.88331,MA0258.1;0.519674,MA0259.1;0.575594,MA0442.1;0}} | ||
| | |||
}} | |||
Latest revision as of 12:43, 17 September 2013
Full id: C4300_Basophils_Eosinophils_Mast_CD14_CD34_CD4_CD8
Phase1 CAGE Peaks
| Hg19::chr3:16306114..16306133,- | p5@DPH3 |
| Hg19::chr3:53925835..53925860,- | p2@ENST00000487571 |
| Hg19::chr3:53925863..53925933,- | p1@ENST00000485414 p1@ENST00000487571 p1@ENST00000488746 |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
| GO ID | GO name | FDR corrected p-value |
|---|---|---|
| GO:0017182 | peptidyl-diphthamide metabolic process | 0.00147180030613446 |
| GO:0017183 | peptidyl-diphthamide biosynthetic process from peptidyl-histidine | 0.00147180030613446 |
| GO:0051099 | positive regulation of binding | 0.00220770045920169 |
| GO:0050709 | negative regulation of protein secretion | 0.00220770045920169 |
| GO:0018202 | peptidyl-histidine modification | 0.00323796067349582 |
| GO:0051048 | negative regulation of secretion | 0.00417010086738098 |
| GO:0050708 | regulation of protein secretion | 0.00515130107147062 |
| GO:0051098 | regulation of binding | 0.00515130107147062 |
| GO:0009306 | protein secretion | 0.00868362180619334 |
| GO:0051046 | regulation of secretion | 0.00868362180619334 |
| GO:0018193 | peptidyl-amino acid modification | 0.0161898033674791 |
| GO:0032940 | secretion by cell | 0.036427057576828 |
| GO:0046903 | secretion | 0.0434747167350488 |
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 4.56e-23 | 98 |
| blood island | 4.56e-23 | 98 |
| hemolymphoid system | 2.35e-18 | 108 |
| bone marrow | 9.85e-18 | 76 |
| bone element | 3.38e-16 | 82 |
| adult organism | 4.88e-15 | 114 |
| skeletal element | 4.30e-14 | 90 |
| skeletal system | 1.42e-12 | 100 |
| immune system | 4.46e-12 | 93 |
| blood | 4.12e-09 | 15 |
| haemolymphatic fluid | 4.12e-09 | 15 |
| organism substance | 4.12e-09 | 15 |
| neural tube | 1.51e-07 | 56 |
| neural rod | 1.51e-07 | 56 |
| future spinal cord | 1.51e-07 | 56 |
| neural keel | 1.51e-07 | 56 |
| regional part of nervous system | 5.57e-07 | 53 |
| regional part of brain | 5.57e-07 | 53 |
| connective tissue | 6.68e-07 | 371 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
| Motifs | -log10(p-value) |
|---|---|
| MA0003.1 | 0.401049 |
| MA0004.1 | 0.826076 |
| MA0006.1 | 0.639288 |
| MA0007.1 | 0.804807 |
| MA0009.1 | 1.3275 |
| MA0014.1 | 0.377374 |
| MA0017.1 | 0.686276 |
| MA0019.1 | 0.990656 |
| MA0024.1 | 1.21731 |
| MA0025.1 | 1.46617 |
| MA0027.1 | 2.95767 |
| MA0028.1 | 0.658629 |
| MA0029.1 | 1.23771 |
| MA0030.1 | 1.22561 |
| MA0031.1 | 1.15713 |
| MA0038.1 | 0.94098 |
| MA0040.1 | 1.24388 |
| MA0041.1 | 0.847069 |
| MA0042.1 | 0.810843 |
| MA0043.1 | 1.32783 |
| MA0046.1 | 1.31611 |
| MA0048.1 | 0.341392 |
| MA0050.1 | 0.81185 |
| MA0051.1 | 0.936307 |
| MA0052.1 | 1.24796 |
| MA0055.1 | 0.190716 |
| MA0056.1 | 0 |
| MA0057.1 | 0.333427 |
| MA0058.1 | 0.716037 |
| MA0059.1 | 0.714521 |
| MA0060.1 | 1.23283 |
| MA0061.1 | 0.456531 |
| MA0063.1 | 0 |
| MA0066.1 | 0.941452 |
| MA0067.1 | 1.65513 |
| MA0068.1 | 0.405474 |
| MA0069.1 | 1.31207 |
| MA0070.1 | 1.30033 |
| MA0071.1 | 0.897953 |
| MA0072.1 | 1.29561 |
| MA0073.1 | 0.0185922 |
| MA0074.1 | 0.935474 |
| MA0076.1 | 0.734647 |
| MA0077.1 | 1.28751 |
| MA0078.1 | 1.04495 |
| MA0081.1 | 0.714712 |
| MA0083.1 | 1.33535 |
| MA0084.1 | 1.84562 |
| MA0087.1 | 1.29304 |
| MA0088.1 | 0.257905 |
| MA0089.1 | 0 |
| MA0090.1 | 0.751469 |
| MA0091.1 | 0.829044 |
| MA0092.1 | 0.785956 |
| MA0093.1 | 0.642957 |
| MA0095.1 | 0 |
| MA0098.1 | 0 |
| MA0100.1 | 0.956299 |
| MA0101.1 | 0.646932 |
| MA0103.1 | 0.628063 |
| MA0105.1 | 0.31555 |
| MA0106.1 | 0.986396 |
| MA0107.1 | 0.556367 |
| MA0108.2 | 1.15387 |
| MA0109.1 | 0 |
| MA0111.1 | 0.767139 |
| MA0113.1 | 1.00436 |
| MA0114.1 | 0.549955 |
| MA0115.1 | 1.57693 |
| MA0116.1 | 0.560723 |
| MA0117.1 | 1.36676 |
| MA0119.1 | 0.695578 |
| MA0122.1 | 1.39371 |
| MA0124.1 | 1.53432 |
| MA0125.1 | 1.44766 |
| MA0130.1 | 0 |
| MA0131.1 | 1.06461 |
| MA0132.1 | 0 |
| MA0133.1 | 0 |
| MA0135.1 | 1.35921 |
| MA0136.1 | 0.948776 |
| MA0139.1 | 0.440097 |
| MA0140.1 | 0.894983 |
| MA0141.1 | 0.712476 |
| MA0142.1 | 1.12317 |
| MA0143.1 | 1.00455 |
| MA0144.1 | 0.531867 |
| MA0145.1 | 0.273764 |
| MA0146.1 | 0.348055 |
| MA0147.1 | 0.565108 |
| MA0148.1 | 0.854239 |
| MA0149.1 | 0.884158 |
| MA0062.2 | 0.449458 |
| MA0035.2 | 0.894194 |
| MA0039.2 | 1.15986 |
| MA0138.2 | 1.04628 |
| MA0002.2 | 1.20011 |
| MA0137.2 | 0.666381 |
| MA0104.2 | 0.491226 |
| MA0047.2 | 0.973066 |
| MA0112.2 | 0.264678 |
| MA0065.2 | 0.277623 |
| MA0150.1 | 1.76247 |
| MA0151.1 | 0 |
| MA0152.1 | 0.902317 |
| MA0153.1 | 1.43021 |
| MA0154.1 | 0.312019 |
| MA0155.1 | 0.256269 |
| MA0156.1 | 0.669101 |
| MA0157.1 | 1.09377 |
| MA0158.1 | 0 |
| MA0159.1 | 1.38935 |
| MA0160.1 | 0.871361 |
| MA0161.1 | 0 |
| MA0162.1 | 1.43223 |
| MA0163.1 | 0.387745 |
| MA0164.1 | 1.01792 |
| MA0080.2 | 0.643061 |
| MA0018.2 | 0.987913 |
| MA0099.2 | 0.902716 |
| MA0079.2 | 0.0373086 |
| MA0102.2 | 1.88331 |
| MA0258.1 | 0.519674 |
| MA0259.1 | 0.575594 |
| MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
| TF | #promoters | Enrichment | p-value | q-value |
|---|---|---|---|---|
| ATF3#467 | 3 | 22.4631745260087 | 8.81932387510763e-05 | 0.00129894424790913 |
| BCLAF1#9774 | 2 | 14.4350984067479 | 0.00620114743554613 | 0.0273936907630912 |
| BRCA1#672 | 2 | 13.4561537621492 | 0.00711980771608456 | 0.0296367316883282 |
| CCNT2#905 | 3 | 6.33620157696263 | 0.00393075003576489 | 0.0190604328621622 |
| E2F1#1869 | 3 | 4.90738921487932 | 0.00846098534723939 | 0.0326602915686108 |
| E2F6#1876 | 3 | 5.01715573169739 | 0.0079176980688633 | 0.0323405869847868 |
| EGR1#1958 | 3 | 4.98817909481014 | 0.00805648813738344 | 0.032161591796506 |
| ELF1#1997 | 3 | 4.25809795880754 | 0.0129517987505461 | 0.0463768268834053 |
| ELK4#2005 | 3 | 16.235681658468 | 0.000233604395574599 | 0.00256113893233419 |
| GABPB1#2553 | 3 | 7.06768383618217 | 0.00283221282541742 | 0.0154542045597581 |
| GATA1#2623 | 3 | 13.5603081438004 | 0.000400961596378263 | 0.00388748868957941 |
| IRF1#3659 | 3 | 7.6371637535639 | 0.00224469274729724 | 0.0128456693608206 |
| JUN#3725 | 3 | 12.5128291923363 | 0.000510331399272625 | 0.00445341753080161 |
| MAFF#23764 | 2 | 37.5435709932968 | 0.000934477401556032 | 0.0067709092091793 |
| MAFK#7975 | 2 | 18.0671554252199 | 0.00398367474493681 | 0.0191155987450703 |
| NANOG#79923 | 2 | 19.4965189873418 | 0.00342725564850102 | 0.0174553375925972 |
| NFE2#4778 | 2 | 51.469507101086 | 0.000498765352839211 | 0.00440698432192677 |
| NFKB1#4790 | 3 | 5.48806342419384 | 0.00604938181565543 | 0.027028508553807 |
| NFYA#4800 | 2 | 12.2837204665537 | 0.00851601140372443 | 0.0324872599259808 |
| NFYB#4801 | 2 | 11.1731955023576 | 0.0102546713505453 | 0.0381473774240284 |
| PAX5#5079 | 3 | 6.66956553117783 | 0.00337029099967726 | 0.017336837990213 |
| SETDB1#9869 | 2 | 26.880017452007 | 0.00181446890796441 | 0.010897143086768 |
| SIN3A#25942 | 3 | 5.40888472681514 | 0.00631896197799152 | 0.0277638228868093 |
| SIX5#147912 | 3 | 17.086715355459 | 0.000200406054632501 | 0.00240107926348099 |
| SMARCB1#6598 | 2 | 12.1684771874383 | 0.00867500222192174 | 0.033003371596069 |
| SP1#6667 | 3 | 5.6983813781409 | 0.00540396270171217 | 0.024727675280587 |
| SRF#6722 | 3 | 13.7971782621678 | 0.000380661502580019 | 0.00375835759765122 |
| THAP1#55145 | 3 | 31.3691446028513 | 3.23800758564397e-05 | 0.000648340249687635 |
| YY1#7528 | 3 | 4.91117074985386 | 0.00844145534180826 | 0.0330404060429154 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.
