FFCP PHASE1:Hg19::chr12:128210666..128210685,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:128210666..128210685,- | |||
|coexpression_cluster_id=C73 | |coexpression_cluster_id=C73 | ||
|description=CAGE_peak_at_chr12:128210666..128210685,- | |description=CAGE_peak_at_chr12:128210666..128210685,- | ||
|id=chr12:128210666..128210685,- | |id=chr12:128210666..128210685,- | ||
|ontology_enrichment_celltype=CL:0001014!3.09e-07!2;CL:0001016!3.09e-07!2;CL:0002195!4.69e-07!2;CL:0002571!4.69e-07!2 | |ontology_enrichment_celltype=CL:0001014!3.09e-07!2;CL:0001016!3.09e-07!2;CL:0002195!4.69e-07!2;CL:0002571!4.69e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.37e-13;2!CL:0001016;1.37e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.37e-13,2;CL:0001016,1.37e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.19e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003296!3.35e-48!4;UBERON:0010133!3.35e-48!4;UBERON:0001894!9.80e-28!7;UBERON:0006222!9.80e-28!7;UBERON:0001905!3.44e-25!2;UBERON:0002757!3.44e-25!2;UBERON:0010134!3.44e-25!2;UBERON:0002784!3.44e-25!2;UBERON:0005408!3.44e-25!2;UBERON:0001899!3.44e-25!2;UBERON:0000007!7.09e-25!2;UBERON:0001876!2.34e-24!2;UBERON:0002780!3.27e-13!41;UBERON:0001890!3.27e-13!41;UBERON:0006240!3.27e-13!41;UBERON:0003080!6.86e-13!42;UBERON:0001049!3.69e-12!57;UBERON:0005068!3.69e-12!57;UBERON:0006241!3.69e-12!57;UBERON:0007135!3.69e-12!57;UBERON:0005743!4.04e-12!86;UBERON:0002368!8.02e-12!35;UBERON:0002616!1.00e-11!59;UBERON:0003056!2.14e-11!61;UBERON:0000073!7.09e-11!94;UBERON:0001016!7.09e-11!94;UBERON:0000349!2.47e-10!5;UBERON:0001017!2.89e-10!82;UBERON:0003075!6.34e-10!86;UBERON:0007284!6.34e-10!86;UBERON:0000955!8.94e-10!69;UBERON:0006238!8.94e-10!69;UBERON:0002346!1.94e-09!90;UBERON:0000949!4.10e-09!45;UBERON:0000153!1.07e-07!129;UBERON:0007811!1.07e-07!129;UBERON:0007023!3.10e-07!115;UBERON:0002148!4.98e-07!2;UBERON:0009662!4.98e-07!2;UBERON:0001870!5.28e-07!2;UBERON:0002530!7.43e-07!59;UBERON:0001871!8.85e-07!7 | |ontology_enrichment_uberon=UBERON:0003296!3.35e-48!4;UBERON:0010133!3.35e-48!4;UBERON:0001894!9.80e-28!7;UBERON:0006222!9.80e-28!7;UBERON:0001905!3.44e-25!2;UBERON:0002757!3.44e-25!2;UBERON:0010134!3.44e-25!2;UBERON:0002784!3.44e-25!2;UBERON:0005408!3.44e-25!2;UBERON:0001899!3.44e-25!2;UBERON:0000007!7.09e-25!2;UBERON:0001876!2.34e-24!2;UBERON:0002780!3.27e-13!41;UBERON:0001890!3.27e-13!41;UBERON:0006240!3.27e-13!41;UBERON:0003080!6.86e-13!42;UBERON:0001049!3.69e-12!57;UBERON:0005068!3.69e-12!57;UBERON:0006241!3.69e-12!57;UBERON:0007135!3.69e-12!57;UBERON:0005743!4.04e-12!86;UBERON:0002368!8.02e-12!35;UBERON:0002616!1.00e-11!59;UBERON:0003056!2.14e-11!61;UBERON:0000073!7.09e-11!94;UBERON:0001016!7.09e-11!94;UBERON:0000349!2.47e-10!5;UBERON:0001017!2.89e-10!82;UBERON:0003075!6.34e-10!86;UBERON:0007284!6.34e-10!86;UBERON:0000955!8.94e-10!69;UBERON:0006238!8.94e-10!69;UBERON:0002346!1.94e-09!90;UBERON:0000949!4.10e-09!45;UBERON:0000153!1.07e-07!129;UBERON:0007811!1.07e-07!129;UBERON:0007023!3.10e-07!115;UBERON:0002148!4.98e-07!2;UBERON:0009662!4.98e-07!2;UBERON:0001870!5.28e-07!2;UBERON:0002530!7.43e-07!59;UBERON:0001871!8.85e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;5.02e-99;4!UBERON:0010133;5.02e-99;4!UBERON:0001894;5.95e-57;7!UBERON:0001905;8.82e-51;2!UBERON:0002757;8.82e-51;2!UBERON:0010134;8.82e-51;2!UBERON:0005408;8.82e-51;2!UBERON:0001899;8.82e-51;2!UBERON:0000007;4.00e-50;2!UBERON:0002784;5.23e-26;4!UBERON:0002368;5.88e-11;33!UBERON:0000949;1.04e-07;43!UBERON:0002780;1.55e-07;41!UBERON:0001890;1.55e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,5.02e-99,4;UBERON:0010133,5.02e-99,4;UBERON:0001894,5.95e-57,7;UBERON:0006222,5.95e-57,7;UBERON:0001905,8.82e-51,2;UBERON:0002757,8.82e-51,2;UBERON:0010134,8.82e-51,2;UBERON:0005408,8.82e-51,2;UBERON:0001899,8.82e-51,2;UBERON:0000007,4.00e-50,2;UBERON:0002784,5.23e-26,4;UBERON:0002368,7.47e-12,35;UBERON:0003056,2.61e-10,61;UBERON:0002780,5.99e-10,41;UBERON:0001890,5.99e-10,41;UBERON:0003080,5.99e-10,41;UBERON:0006240,5.99e-10,41;UBERON:0000949,2.59e-09,45;UBERON:0000073,8.01e-08,53;UBERON:0002616,8.01e-08,53;UBERON:0003075,9.54e-08,82;UBERON:0007284,9.54e-08,82;UBERON:0001049,1.98e-07,56;UBERON:0005068,1.98e-07,56;UBERON:0006241,1.98e-07,56;UBERON:0007135,1.98e-07,56;UBERON:0002346,2.13e-07,86;UBERON:0002530,3.45e-07,59 | |||
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|short_description=p@chr12:128210666..128210685,- | |short_description=p@chr12:128210666..128210685,- | ||
}} | }} |
Latest revision as of 06:37, 24 July 2015
Short description: | p@chr12:128210666..128210685, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:128210666..128210685, - |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.37e-13 | 2 |
immature CD1a-positive Langerhans cell | 1.37e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 5.02e-99 | 4 |
neuroendocrine gland | 5.02e-99 | 4 |
diencephalon | 5.95e-57 | 7 |
future diencephalon | 5.95e-57 | 7 |
pineal body | 8.82e-51 | 2 |
regional part of epithalamus | 8.82e-51 | 2 |
secretory circumventricular organ | 8.82e-51 | 2 |
circumventricular organ | 8.82e-51 | 2 |
epithalamus | 8.82e-51 | 2 |
pituitary gland | 4.00e-50 | 2 |
regional part of diencephalon | 5.23e-26 | 4 |
endocrine gland | 7.47e-12 | 35 |
pre-chordal neural plate | 2.61e-10 | 61 |
regional part of forebrain | 5.99e-10 | 41 |
forebrain | 5.99e-10 | 41 |
anterior neural tube | 5.99e-10 | 41 |
future forebrain | 5.99e-10 | 41 |
endocrine system | 2.59e-09 | 45 |
regional part of nervous system | 8.01e-08 | 53 |
regional part of brain | 8.01e-08 | 53 |
neural plate | 9.54e-08 | 82 |
presumptive neural plate | 9.54e-08 | 82 |
neural tube | 1.98e-07 | 56 |
neural rod | 1.98e-07 | 56 |
future spinal cord | 1.98e-07 | 56 |
neural keel | 1.98e-07 | 56 |
neurectoderm | 2.13e-07 | 86 |
gland | 3.45e-07 | 59 |