FFCP PHASE1:Hg19::chr16:23962525..23962550,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:23962525..23962550,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr16:23962525..23962550,+ | |description=CAGE_peak_at_chr16:23962525..23962550,+ | ||
|id=chr16:23962525..23962550,+ | |id=chr16:23962525..23962550,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.29e-83!42;CL:0000860!6.12e-77!45;CL:0000766!2.34e-57!76;CL:0000839!1.24e-55!70;CL:0002194!3.27e-55!63;CL:0000576!3.27e-55!63;CL:0000040!3.27e-55!63;CL:0000559!3.27e-55!63;CL:0000557!9.63e-55!71;CL:0002009!2.72e-53!65;CL:0000763!1.40e-38!112;CL:0000049!1.40e-38!112;CL:0000738!8.89e-37!140;CL:0002031!7.11e-36!124;CL:0002087!1.55e-35!119;CL:0000037!6.59e-30!172;CL:0000566!6.59e-30!172;CL:0002032!7.85e-30!165;CL:0000837!7.85e-30!165;CL:0000988!9.61e-28!182;CL:0000134!3.66e-10!358;CL:0002320!8.75e-10!365;CL:0000219!1.88e-08!390;CL:0002393!6.41e-07!9;CL:0002397!6.41e-07!9;CL:0000048!7.19e-07!430 | |ontology_enrichment_celltype=CL:0002057!5.29e-83!42;CL:0000860!6.12e-77!45;CL:0000766!2.34e-57!76;CL:0000839!1.24e-55!70;CL:0002194!3.27e-55!63;CL:0000576!3.27e-55!63;CL:0000040!3.27e-55!63;CL:0000559!3.27e-55!63;CL:0000557!9.63e-55!71;CL:0002009!2.72e-53!65;CL:0000763!1.40e-38!112;CL:0000049!1.40e-38!112;CL:0000738!8.89e-37!140;CL:0002031!7.11e-36!124;CL:0002087!1.55e-35!119;CL:0000037!6.59e-30!172;CL:0000566!6.59e-30!172;CL:0002032!7.85e-30!165;CL:0000837!7.85e-30!165;CL:0000988!9.61e-28!182;CL:0000134!3.66e-10!358;CL:0002320!8.75e-10!365;CL:0000219!1.88e-08!390;CL:0002393!6.41e-07!9;CL:0002397!6.41e-07!9;CL:0000048!7.19e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.24e-98;33!CL:0002057;1.24e-98;33!CL:0000473;1.78e-68;39!CL:0000234;1.78e-68;39!CL:0000576;1.27e-56;48!CL:0000766;6.04e-32;69!CL:0002087;2.67e-14;104!CL:0000763;8.02e-13;100!CL:0000738;6.77e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.87e-102,42;CL:0002057,6.87e-102,42;CL:0000473,1.04e-88,48;CL:0000234,1.04e-88,48;CL:0002194,3.02e-70,59;CL:0000576,3.02e-70,59;CL:0000040,3.02e-70,59;CL:0000559,3.02e-70,59;CL:0002009,7.30e-68,61;CL:0000839,1.59e-62,66;CL:0000766,4.55e-62,72;CL:0000557,1.49e-61,67;CL:0000763,2.48e-40,108;CL:0000049,2.48e-40,108;CL:0002087,1.55e-34,115;CL:0002031,5.95e-33,120;CL:0000738,2.63e-31,136;CL:0002032,7.10e-26,161;CL:0000837,7.10e-26,161;CL:0000037,1.22e-24,168;CL:0000988,3.39e-23,177;CL:0000134,1.37e-09,354;CL:0002320,2.53e-09,361;CL:0000219,2.22e-08,386;CL:0000048,3.20e-07,427;CL:0000723,4.62e-07,433;CL:0000034,7.44e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.93e-73;42!CL:0000049;3.88e-10;108!UBERON:0005425;9.17e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.02e-47!80;UBERON:0001474!7.67e-44!86;UBERON:0002390!7.73e-43!102;UBERON:0003061!7.73e-43!102;UBERON:0002193!2.97e-38!112;UBERON:0004765!3.78e-36!101;UBERON:0001434!3.78e-36!101;UBERON:0002405!7.71e-35!115;UBERON:0002204!1.18e-18!167;UBERON:0003081!1.15e-15!216;UBERON:0002384!2.87e-09!375 | |ontology_enrichment_uberon=UBERON:0002371!1.02e-47!80;UBERON:0001474!7.67e-44!86;UBERON:0002390!7.73e-43!102;UBERON:0003061!7.73e-43!102;UBERON:0002193!2.97e-38!112;UBERON:0004765!3.78e-36!101;UBERON:0001434!3.78e-36!101;UBERON:0002405!7.71e-35!115;UBERON:0002204!1.18e-18!167;UBERON:0003081!1.15e-15!216;UBERON:0002384!2.87e-09!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.17e-09;1!UBERON:0001785;9.17e-09;1!UBERON:0002464;9.17e-09;1!UBERON:0004904;9.17e-09;1!UBERON:0001021;9.17e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.28e-54,76;UBERON:0001474,9.20e-50,82;UBERON:0004765,4.64e-45,90;UBERON:0002405,1.67e-43,93;UBERON:0002390,4.08e-41,98;UBERON:0003061,4.08e-41,98;UBERON:0001434,3.15e-40,100;UBERON:0002193,5.35e-37,108;UBERON:0002204,1.19e-22,167;UBERON:0003081,5.86e-18,203;UBERON:0000926,3.76e-10,315;UBERON:0004120,3.76e-10,315;UBERON:0006603,3.76e-10,315;UBERON:0002384,5.87e-09,371;UBERON:0000941,1.07e-08,1;UBERON:0001785,1.07e-08,1;UBERON:0002464,1.07e-08,1;UBERON:0004904,1.07e-08,1;UBERON:0001021,1.07e-08,1;UBERON:0003902,1.07e-08,1;UBERON:0005425,1.07e-08,1 | |||
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| ||
|short_description=p@chr16:23962525..23962550,+ | |short_description=p@chr16:23962525..23962550,+ | ||
}} | }} |
Latest revision as of 07:18, 25 July 2015
Short description: | p@chr16:23962525..23962550, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:23962525..23962550, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.87e-102 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.87e-102 | 42 |
defensive cell | 1.04e-88 | 48 |
phagocyte | 1.04e-88 | 48 |
monopoietic cell | 3.02e-70 | 59 |
monocyte | 3.02e-70 | 59 |
monoblast | 3.02e-70 | 59 |
promonocyte | 3.02e-70 | 59 |
macrophage dendritic cell progenitor | 7.30e-68 | 61 |
myeloid lineage restricted progenitor cell | 1.59e-62 | 66 |
myeloid leukocyte | 4.55e-62 | 72 |
granulocyte monocyte progenitor cell | 1.49e-61 | 67 |
myeloid cell | 2.48e-40 | 108 |
common myeloid progenitor | 2.48e-40 | 108 |
nongranular leukocyte | 1.55e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 5.95e-33 | 120 |
leukocyte | 2.63e-31 | 136 |
hematopoietic oligopotent progenitor cell | 7.10e-26 | 161 |
hematopoietic multipotent progenitor cell | 7.10e-26 | 161 |
hematopoietic stem cell | 1.22e-24 | 168 |
hematopoietic cell | 3.39e-23 | 177 |
mesenchymal cell | 1.37e-09 | 354 |
connective tissue cell | 2.53e-09 | 361 |
motile cell | 2.22e-08 | 386 |
multi fate stem cell | 3.20e-07 | 427 |
somatic stem cell | 4.62e-07 | 433 |
stem cell | 7.44e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.28e-54 | 76 |
bone element | 9.20e-50 | 82 |
skeletal element | 4.64e-45 | 90 |
immune system | 1.67e-43 | 93 |
hematopoietic system | 4.08e-41 | 98 |
blood island | 4.08e-41 | 98 |
skeletal system | 3.15e-40 | 100 |
hemolymphoid system | 5.35e-37 | 108 |
musculoskeletal system | 1.19e-22 | 167 |
lateral plate mesoderm | 5.86e-18 | 203 |
mesoderm | 3.76e-10 | 315 |
mesoderm-derived structure | 3.76e-10 | 315 |
presumptive mesoderm | 3.76e-10 | 315 |
connective tissue | 5.87e-09 | 371 |
cranial nerve II | 1.07e-08 | 1 |
cranial nerve | 1.07e-08 | 1 |
nerve trunk | 1.07e-08 | 1 |
nerve connecting eye with brain | 1.07e-08 | 1 |
nerve | 1.07e-08 | 1 |
retinal neural layer | 1.07e-08 | 1 |
presumptive neural retina | 1.07e-08 | 1 |