FFCP PHASE1:Hg19::chr22:47070490..47070513,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23151 | |EntrezGene=23151 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29113 | |HGNC=29113 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000408031,uc003bhy.2_5end | |association_with_transcript=0bp_to_ENST00000408031,uc003bhy.2_5end | ||
|cluster_id=chr22:47070490..47070513,+ | |||
|coexpression_cluster_id=C44 | |coexpression_cluster_id=C44 | ||
|description=CAGE_peak_3_at_GRAMD4_5end | |description=CAGE_peak_3_at_GRAMD4_5end | ||
|id=chr22:47070490..47070513,+ | |id=chr22:47070490..47070513,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.37e-26!140;CL:0000037!1.39e-25!172;CL:0000566!1.39e-25!172;CL:0000988!8.33e-24!182;CL:0002087!1.22e-21!119;CL:0002032!4.16e-20!165;CL:0000837!4.16e-20!165;CL:0002057!7.25e-20!42;CL:0000860!6.59e-18!45;CL:0002031!9.66e-18!124;CL:0000766!7.91e-16!76;CL:0000557!4.19e-13!71;CL:0000763!7.62e-13!112;CL:0000049!7.62e-13!112;CL:0002194!8.19e-13!63;CL:0000576!8.19e-13!63;CL:0000040!8.19e-13!63;CL:0000559!8.19e-13!63;CL:0000839!2.78e-12!70;CL:0002009!3.88e-12!65;CL:0002393!1.07e-11!9;CL:0002397!1.07e-11!9;CL:0000624!2.29e-09!6;CL:0000084!8.94e-08!25;CL:0000827!8.94e-08!25;CL:0000791!2.29e-07!18;CL:0000789!2.29e-07!18;CL:0002420!2.29e-07!18;CL:0002419!2.29e-07!18;CL:0000790!2.29e-07!18;CL:0000542!2.30e-07!53;CL:0000051!2.30e-07!53;CL:0000838!9.61e-07!52 | |ontology_enrichment_celltype=CL:0000738!4.37e-26!140;CL:0000037!1.39e-25!172;CL:0000566!1.39e-25!172;CL:0000988!8.33e-24!182;CL:0002087!1.22e-21!119;CL:0002032!4.16e-20!165;CL:0000837!4.16e-20!165;CL:0002057!7.25e-20!42;CL:0000860!6.59e-18!45;CL:0002031!9.66e-18!124;CL:0000766!7.91e-16!76;CL:0000557!4.19e-13!71;CL:0000763!7.62e-13!112;CL:0000049!7.62e-13!112;CL:0002194!8.19e-13!63;CL:0000576!8.19e-13!63;CL:0000040!8.19e-13!63;CL:0000559!8.19e-13!63;CL:0000839!2.78e-12!70;CL:0002009!3.88e-12!65;CL:0002393!1.07e-11!9;CL:0002397!1.07e-11!9;CL:0000624!2.29e-09!6;CL:0000084!8.94e-08!25;CL:0000827!8.94e-08!25;CL:0000791!2.29e-07!18;CL:0000789!2.29e-07!18;CL:0002420!2.29e-07!18;CL:0002419!2.29e-07!18;CL:0000790!2.29e-07!18;CL:0000542!2.30e-07!53;CL:0000051!2.30e-07!53;CL:0000838!9.61e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000784;3.31e-19;3!CL:0000898;9.21e-18;3!CL:0000875;2.05e-17;3!CL:0002396;2.05e-17;3!CL:0000624;2.19e-15;6!CL:0000815;3.41e-12;2!CL:0000792;3.41e-12;2!CL:0002677;3.41e-12;2!CL:0000037;1.97e-07;1!CL:0001024;1.97e-07;1!CL:0002032;2.75e-07;1!CL:0000557;2.75e-07;1!CL:0000895;2.75e-07;1!CL:0000817;6.30e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.87e-19,168;CL:0000784,3.33e-19,3;CL:0000898,2.98e-18,3;CL:0000988,3.41e-18,177;CL:0000875,3.34e-17,3;CL:0002396,3.34e-17,3;CL:0000624,7.87e-16,6;CL:0000815,1.36e-12,2;CL:0000792,1.36e-12,2;CL:0002677,1.36e-12,2;CL:0000738,1.63e-12,136;CL:0002032,1.87e-12,161;CL:0000837,1.87e-12,161;CL:0000763,1.62e-11,108;CL:0000049,1.62e-11,108;CL:0002087,6.21e-08,115;CL:0001024,1.98e-07,1;CL:0000860,2.09e-07,42;CL:0002057,2.09e-07,42;CL:0000810,2.23e-07,1;CL:0000895,2.23e-07,1;CL:0002436,2.23e-07,1;CL:0002427,2.23e-07,1;CL:0002428,2.23e-07,1;CL:0002429,2.23e-07,1;CL:0002433,2.23e-07,1;CL:0002431,2.23e-07,1;CL:0002432,2.23e-07,1;CL:0000766,2.24e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002427;2.75e-07;1!UBERON:0000358;2.75e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.36e-15!112;UBERON:0002390!1.29e-14!102;UBERON:0003061!1.29e-14!102;UBERON:0002371!1.55e-11!80;UBERON:0002405!1.43e-10!115;UBERON:0001474!4.81e-10!86;UBERON:0007023!1.52e-08!115;UBERON:0004765!1.00e-07!101;UBERON:0001434!1.00e-07!101 | |ontology_enrichment_uberon=UBERON:0002193!2.36e-15!112;UBERON:0002390!1.29e-14!102;UBERON:0003061!1.29e-14!102;UBERON:0002371!1.55e-11!80;UBERON:0002405!1.43e-10!115;UBERON:0001474!4.81e-10!86;UBERON:0007023!1.52e-08!115;UBERON:0004765!1.00e-07!101;UBERON:0001434!1.00e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0001389;2.75e-07;1!UBERON:0000026;2.75e-07;1!UBERON:0008784;2.75e-07;1!UBERON:0006058;2.75e-07;1!UBERON:0003663;2.75e-07;1!UBERON:0004256;2.75e-07;1!UBERON:0004708;2.75e-07;1!UBERON:0002101;2.75e-07;1!UBERON:0004709;2.75e-07;1!UBERON:0002529;2.75e-07;1!UBERON:0010538;2.75e-07;1!UBERON:0003661;2.75e-07;1!UBERON:0010890;2.75e-07;1!UBERON:0002471;2.75e-07;1!UBERON:0001383;2.75e-07;1!UBERON:0010758;2.75e-07;1!UBERON:0010707;2.75e-07;1!UBERON:0000978;2.75e-07;1!UBERON:0002103;2.75e-07;1!UBERON:0001665;2.75e-07;1!UBERON:0003823;2.75e-07;1!UBERON:0000154;2.75e-07;1!UBERON:0010709;2.75e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.08e-08,98;UBERON:0003061,2.08e-08,98;UBERON:0002405,1.10e-07,93;UBERON:0002193,2.18e-07,108;UBERON:0005418,2.67e-07,1;UBERON:0001389,2.67e-07,1;UBERON:0000026,2.67e-07,1;UBERON:0008784,2.67e-07,1;UBERON:0006058,2.67e-07,1;UBERON:0003663,2.67e-07,1;UBERON:0004256,2.67e-07,1;UBERON:0004708,2.67e-07,1;UBERON:0002101,2.67e-07,1;UBERON:0004709,2.67e-07,1;UBERON:0002529,2.67e-07,1;UBERON:0010538,2.67e-07,1;UBERON:0003661,2.67e-07,1;UBERON:0010890,2.67e-07,1;UBERON:0002471,2.67e-07,1;UBERON:0001383,2.67e-07,1;UBERON:0004357,2.67e-07,1;UBERON:0004347,2.67e-07,1;UBERON:0005420,2.67e-07,1;UBERON:0005732,2.67e-07,1;UBERON:0010758,2.67e-07,1;UBERON:0010707,2.67e-07,1;UBERON:0000978,2.67e-07,1;UBERON:0002103,2.67e-07,1;UBERON:0001665,2.67e-07,1;UBERON:0003823,2.67e-07,1;UBERON:0000154,2.67e-07,1;UBERON:0010709,2.67e-07,1;UBERON:0005733,2.67e-07,1;UBERON:0005730,2.67e-07,1;UBERON:0002371,5.94e-07,76 | |||
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| ||
|short_description=p3@GRAMD4 | |short_description=p3@GRAMD4 | ||
}} | }} |
Latest revision as of 06:02, 25 September 2015
Short description: | p3@GRAMD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GRAMD4_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 0bp_to_ENST00000408031, uc003bhy.2_5end |
EntrezGene: | GRAMD4 |
HGNC: | 29113 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.08e-08 | 98 |
blood island | 2.08e-08 | 98 |
immune system | 1.10e-07 | 93 |
hemolymphoid system | 2.18e-07 | 108 |
hindlimb bud | 2.67e-07 | 1 |
soleus muscle | 2.67e-07 | 1 |
appendage | 2.67e-07 | 1 |
lower limb segment | 2.67e-07 | 1 |
multi-limb segment region | 2.67e-07 | 1 |
hindlimb muscle | 2.67e-07 | 1 |
hindlimb zeugopod muscle | 2.67e-07 | 1 |
paired limb/fin | 2.67e-07 | 1 |
limb | 2.67e-07 | 1 |
pelvic appendage | 2.67e-07 | 1 |
limb segment | 2.67e-07 | 1 |
paired limb/fin segment | 2.67e-07 | 1 |
limb muscle | 2.67e-07 | 1 |
pelvic complex muscle | 2.67e-07 | 1 |
zeugopod | 2.67e-07 | 1 |
muscle of leg | 2.67e-07 | 1 |
paired limb/fin bud | 2.67e-07 | 1 |
limb bud | 2.67e-07 | 1 |
pelvic appendage bud | 2.67e-07 | 1 |
limb/fin field | 2.67e-07 | 1 |
subdivision of organism along appendicular axis | 2.67e-07 | 1 |
appendage girdle complex | 2.67e-07 | 1 |
leg | 2.67e-07 | 1 |
hindlimb | 2.67e-07 | 1 |
triceps surae | 2.67e-07 | 1 |
hindlimb zeugopod | 2.67e-07 | 1 |
posterior region of body | 2.67e-07 | 1 |
pelvic complex | 2.67e-07 | 1 |
limb field | 2.67e-07 | 1 |
hindlimb/pelvic fin field | 2.67e-07 | 1 |
bone marrow | 5.94e-07 | 76 |