FFCP PHASE1:Hg19::chr2:39348137..39348212,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6654 | |EntrezGene=6654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11187 | |HGNC=11187 | ||
|TSSclassifier=strong | |||
|UniProt=Q07889 | |UniProt=Q07889 | ||
|association_with_transcript=0bp_to_ENST00000426016_5end | |association_with_transcript=0bp_to_ENST00000426016_5end | ||
|cluster_id=chr2:39348137..39348212,- | |||
|coexpression_cluster_id=C300 | |coexpression_cluster_id=C300 | ||
|description=CAGE_peak_1_at_SOS1_5end | |description=CAGE_peak_1_at_SOS1_5end | ||
|id=chr2:39348137..39348212,- | |id=chr2:39348137..39348212,- | ||
|ontology_enrichment_celltype=CL:0002032!8.22e-09!165;CL:0000837!8.22e-09!165;CL:0000037!8.30e-09!172;CL:0000566!8.30e-09!172;CL:0002087!5.96e-08!119;CL:0000988!1.28e-07!182;CL:0002031!1.39e-07!124;CL:0002057!3.01e-07!42;CL:0000860!3.54e-07!45;CL:0000763!6.63e-07!112;CL:0000049!6.63e-07!112;CL:0000738!6.66e-07!140 | |ontology_enrichment_celltype=CL:0002032!8.22e-09!165;CL:0000837!8.22e-09!165;CL:0000037!8.30e-09!172;CL:0000566!8.30e-09!172;CL:0002087!5.96e-08!119;CL:0000988!1.28e-07!182;CL:0002031!1.39e-07!124;CL:0002057!3.01e-07!42;CL:0000860!3.54e-07!45;CL:0000763!6.63e-07!112;CL:0000049!6.63e-07!112;CL:0000738!6.66e-07!140 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,1.02e-08,161;CL:0000837,1.02e-08,161;CL:0000037,1.03e-08,168;CL:0002087,6.89e-08,115;CL:0000988,8.55e-08,177;CL:0002031,1.64e-07,120;CL:0000860,3.01e-07,42;CL:0002057,3.01e-07,42;CL:0000763,7.73e-07,108;CL:0000049,7.73e-07,108;CL:0000738,8.10e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.30e-31!115;UBERON:0001049!7.98e-16!57;UBERON:0005068!7.98e-16!57;UBERON:0006241!7.98e-16!57;UBERON:0007135!7.98e-16!57;UBERON:0001017!3.92e-14!82;UBERON:0003080!9.66e-14!42;UBERON:0002780!3.53e-13!41;UBERON:0001890!3.53e-13!41;UBERON:0006240!3.53e-13!41;UBERON:0002616!4.89e-13!59;UBERON:0000073!5.48e-13!94;UBERON:0001016!5.48e-13!94;UBERON:0005743!1.25e-12!86;UBERON:0000955!2.08e-12!69;UBERON:0006238!2.08e-12!69;UBERON:0002020!1.04e-10!34;UBERON:0003528!1.04e-10!34;UBERON:0001893!2.64e-10!34;UBERON:0002791!4.52e-10!33;UBERON:0001869!7.84e-10!32;UBERON:0002619!1.62e-08!22;UBERON:0003075!2.91e-08!86;UBERON:0007284!2.91e-08!86;UBERON:0002346!4.73e-08!90;UBERON:0002390!7.76e-08!102;UBERON:0003061!7.76e-08!102;UBERON:0001950!1.39e-07!20;UBERON:0000956!1.61e-07!25;UBERON:0000203!1.61e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!1.30e-31!115;UBERON:0001049!7.98e-16!57;UBERON:0005068!7.98e-16!57;UBERON:0006241!7.98e-16!57;UBERON:0007135!7.98e-16!57;UBERON:0001017!3.92e-14!82;UBERON:0003080!9.66e-14!42;UBERON:0002780!3.53e-13!41;UBERON:0001890!3.53e-13!41;UBERON:0006240!3.53e-13!41;UBERON:0002616!4.89e-13!59;UBERON:0000073!5.48e-13!94;UBERON:0001016!5.48e-13!94;UBERON:0005743!1.25e-12!86;UBERON:0000955!2.08e-12!69;UBERON:0006238!2.08e-12!69;UBERON:0002020!1.04e-10!34;UBERON:0003528!1.04e-10!34;UBERON:0001893!2.64e-10!34;UBERON:0002791!4.52e-10!33;UBERON:0001869!7.84e-10!32;UBERON:0002619!1.62e-08!22;UBERON:0003075!2.91e-08!86;UBERON:0007284!2.91e-08!86;UBERON:0002346!4.73e-08!90;UBERON:0002390!7.76e-08!102;UBERON:0003061!7.76e-08!102;UBERON:0001950!1.39e-07!20;UBERON:0000956!1.61e-07!25;UBERON:0000203!1.61e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.77e-10;41!UBERON:0001890;5.77e-10;41!UBERON:0002791;3.49e-09;32!UBERON:0003528;3.49e-09;34!UBERON:0002020;3.49e-09;34!UBERON:0001869;6.50e-09;32!UBERON:0001893;9.03e-09;34!UBERON:0007023;9.06e-09;114!UBERON:0000073;1.13e-08;53!UBERON:0002616;1.13e-08;53!UBERON:0002619;1.58e-08;22!UBERON:0001950;1.34e-07;20!UBERON:0000956;1.47e-07;25!UBERON:0000203;1.47e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.49e-31,114;UBERON:0001049,2.84e-15,56;UBERON:0005068,2.84e-15,56;UBERON:0006241,2.84e-15,56;UBERON:0007135,2.84e-15,56;UBERON:0000073,3.23e-14,53;UBERON:0002616,3.23e-14,53;UBERON:0001016,6.01e-14,89;UBERON:0001017,1.19e-13,81;UBERON:0002780,3.53e-13,41;UBERON:0001890,3.53e-13,41;UBERON:0003080,3.53e-13,41;UBERON:0006240,3.53e-13,41;UBERON:0000955,6.28e-12,68;UBERON:0006238,6.28e-12,68;UBERON:0003528,1.04e-10,34;UBERON:0002020,1.04e-10,34;UBERON:0001893,2.64e-10,34;UBERON:0002791,4.76e-10,32;UBERON:0001869,7.84e-10,32;UBERON:0002619,1.62e-08,22;UBERON:0003075,4.78e-08,82;UBERON:0007284,4.78e-08,82;UBERON:0002346,7.85e-08,86;UBERON:0002390,8.60e-08,98;UBERON:0003061,8.60e-08,98;UBERON:0001950,1.39e-07,20;UBERON:0000956,1.61e-07,25;UBERON:0000203,1.61e-07,25;UBERON:0011216,4.92e-07,223 | |||
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|short_description=p1@SOS1 | |short_description=p1@SOS1 | ||
}} | }} |
Latest revision as of 04:46, 17 September 2015
Short description: | p1@SOS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SOS1_5end |
Coexpression cluster: | C300_CD4_CD8_NK_Natural_blood_mycosis_Basophils |
Association with transcript: | 0bp_to_ENST00000426016_5end |
EntrezGene: | SOS1 |
HGNC: | 11187 |
UniProt: | Q07889 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 1.02e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-08 | 161 |
hematopoietic stem cell | 1.03e-08 | 168 |
nongranular leukocyte | 6.89e-08 | 115 |
hematopoietic cell | 8.55e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 1.64e-07 | 120 |
classical monocyte | 3.01e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.01e-07 | 42 |
myeloid cell | 7.73e-07 | 108 |
common myeloid progenitor | 7.73e-07 | 108 |
leukocyte | 8.10e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.49e-31 | 114 |
neural tube | 2.84e-15 | 56 |
neural rod | 2.84e-15 | 56 |
future spinal cord | 2.84e-15 | 56 |
neural keel | 2.84e-15 | 56 |
regional part of nervous system | 3.23e-14 | 53 |
regional part of brain | 3.23e-14 | 53 |
nervous system | 6.01e-14 | 89 |
central nervous system | 1.19e-13 | 81 |
regional part of forebrain | 3.53e-13 | 41 |
forebrain | 3.53e-13 | 41 |
anterior neural tube | 3.53e-13 | 41 |
future forebrain | 3.53e-13 | 41 |
brain | 6.28e-12 | 68 |
future brain | 6.28e-12 | 68 |
brain grey matter | 1.04e-10 | 34 |
gray matter | 1.04e-10 | 34 |
telencephalon | 2.64e-10 | 34 |
regional part of telencephalon | 4.76e-10 | 32 |
cerebral hemisphere | 7.84e-10 | 32 |
regional part of cerebral cortex | 1.62e-08 | 22 |
neural plate | 4.78e-08 | 82 |
presumptive neural plate | 4.78e-08 | 82 |
neurectoderm | 7.85e-08 | 86 |
hematopoietic system | 8.60e-08 | 98 |
blood island | 8.60e-08 | 98 |
neocortex | 1.39e-07 | 20 |
cerebral cortex | 1.61e-07 | 25 |
pallium | 1.61e-07 | 25 |
organ system subdivision | 4.92e-07 | 223 |