FFCP PHASE1:Hg19::chr6:138893661..138893687,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57224 | |EntrezGene=57224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21021 | |HGNC=21021 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SYE7 | |UniProt=Q5SYE7 | ||
|association_with_transcript=0bp_to_ENST00000427025,NM_020464,uc003qhx.2_5end | |association_with_transcript=0bp_to_ENST00000427025,NM_020464,uc003qhx.2_5end | ||
|cluster_id=chr6:138893661..138893687,- | |||
|coexpression_cluster_id=C3731 | |coexpression_cluster_id=C3731 | ||
|description=CAGE_peak_7_at_NHSL1_5end | |description=CAGE_peak_7_at_NHSL1_5end | ||
|id=chr6:138893661..138893687,- | |id=chr6:138893661..138893687,- | ||
|ontology_enrichment_celltype=CL:0000133!4.83e-13!59;CL:0000147!1.19e-11!14;CL:0002319!1.88e-10!25;CL:0000221!1.69e-09!71;CL:0000333!5.52e-09!41;CL:0000047!1.22e-08!8;CL:0000148!1.42e-08!10;CL:0000541!1.42e-08!10;CL:0000540!9.37e-07!6;CL:0000031!9.37e-07!6;CL:0000404!9.37e-07!6 | |ontology_enrichment_celltype=CL:0000133!4.83e-13!59;CL:0000147!1.19e-11!14;CL:0002319!1.88e-10!25;CL:0000221!1.69e-09!71;CL:0000333!5.52e-09!41;CL:0000047!1.22e-08!8;CL:0000148!1.42e-08!10;CL:0000541!1.42e-08!10;CL:0000540!9.37e-07!6;CL:0000031!9.37e-07!6;CL:0000404!9.37e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000147;1.37e-21;14!CL:0002319;3.33e-18;25!CL:0000148;7.58e-15;10!CL:0000075;6.77e-14;27!CL:0000710;2.30e-12;20!CL:0000128;3.32e-11;7!CL:0000126;3.32e-11;7!CL:0000127;3.32e-11;7!CL:0000540;8.63e-10;6!CL:0000404;8.63e-10;6!CL:0000149;6.62e-09;4!CL:0002567;2.18e-08;3!CL:0002077;2.55e-08;34!CL:0000095;3.67e-08;17!CL:0002605;1.29e-07;3!CL:0000064;1.87e-07;3!CL:0000067;1.87e-07;3!CL:0005012;1.87e-07;3!CL:0002304;1.87e-07;3!CL:0002603;2.98e-07;3!CL:0002586;9.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.70e-26,59;CL:0000147,6.93e-22,14;CL:0000221,2.74e-20,72;CL:0002319,4.83e-18,25;CL:0000333,1.22e-16,41;CL:0000148,5.26e-15,10;CL:0000541,5.26e-15,10;CL:0000075,5.07e-14,27;CL:0000047,7.04e-14,8;CL:0000710,1.51e-12,20;CL:0000128,4.98e-11,7;CL:0000126,4.98e-11,7;CL:0000127,4.98e-11,7;CL:0002453,4.98e-11,7;CL:0000540,9.28e-10,6;CL:0000031,9.28e-10,6;CL:0000404,9.28e-10,6;CL:0000149,3.14e-09,4;CL:0002077,4.38e-09,34;CL:0002567,2.11e-08,3;CL:0000095,4.44e-08,17;CL:0000123,4.44e-08,17;CL:0000064,1.31e-07,3;CL:0000067,1.31e-07,3;CL:0005012,1.31e-07,3;CL:0002304,1.31e-07,3;CL:0002605,2.06e-07,3;CL:0002603,3.07e-07,3;CL:0002586,4.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000133;1.52e-12;59!CL:0000031;8.63e-10;6!CL:0000221;1.17e-07;72 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.79e-21!86;UBERON:0000073!1.86e-19!94;UBERON:0001016!1.86e-19!94;UBERON:0001017!1.40e-18!82;UBERON:0003075!2.98e-16!86;UBERON:0007284!2.98e-16!86;UBERON:0002346!4.00e-16!90;UBERON:0000924!1.37e-14!173;UBERON:0006601!1.37e-14!173;UBERON:0004121!1.70e-14!169;UBERON:0000119!3.74e-14!312;UBERON:0000483!1.22e-13!309;UBERON:0000955!1.17e-12!69;UBERON:0006238!1.17e-12!69;UBERON:0000153!1.79e-12!129;UBERON:0007811!1.79e-12!129;UBERON:0001049!2.33e-12!57;UBERON:0005068!2.33e-12!57;UBERON:0006241!2.33e-12!57;UBERON:0007135!2.33e-12!57;UBERON:0002616!2.64e-12!59;UBERON:0000033!2.68e-12!123;UBERON:0003056!9.21e-12!61;UBERON:0000481!4.73e-10!347;UBERON:0007023!1.75e-09!115;UBERON:0000475!2.31e-09!365;UBERON:0007625!1.47e-08!11;UBERON:0000468!3.36e-08!659;UBERON:0000025!3.64e-08!194;UBERON:0001869!7.22e-08!32;UBERON:0002780!8.07e-08!41;UBERON:0001890!8.07e-08!41;UBERON:0006240!8.07e-08!41;UBERON:0001893!9.46e-08!34;UBERON:0001155!1.03e-07!9;UBERON:0002791!1.54e-07!33;UBERON:0003080!1.85e-07!42;UBERON:0000477!2.83e-07!286;UBERON:0002020!3.57e-07!34;UBERON:0003528!3.57e-07!34;UBERON:0000922!4.60e-07!612;UBERON:0004111!7.65e-07!241;UBERON:0003076!8.29e-07!15;UBERON:0003057!8.29e-07!15 | |ontology_enrichment_uberon=UBERON:0005743!2.79e-21!86;UBERON:0000073!1.86e-19!94;UBERON:0001016!1.86e-19!94;UBERON:0001017!1.40e-18!82;UBERON:0003075!2.98e-16!86;UBERON:0007284!2.98e-16!86;UBERON:0002346!4.00e-16!90;UBERON:0000924!1.37e-14!173;UBERON:0006601!1.37e-14!173;UBERON:0004121!1.70e-14!169;UBERON:0000119!3.74e-14!312;UBERON:0000483!1.22e-13!309;UBERON:0000955!1.17e-12!69;UBERON:0006238!1.17e-12!69;UBERON:0000153!1.79e-12!129;UBERON:0007811!1.79e-12!129;UBERON:0001049!2.33e-12!57;UBERON:0005068!2.33e-12!57;UBERON:0006241!2.33e-12!57;UBERON:0007135!2.33e-12!57;UBERON:0002616!2.64e-12!59;UBERON:0000033!2.68e-12!123;UBERON:0003056!9.21e-12!61;UBERON:0000481!4.73e-10!347;UBERON:0007023!1.75e-09!115;UBERON:0000475!2.31e-09!365;UBERON:0007625!1.47e-08!11;UBERON:0000468!3.36e-08!659;UBERON:0000025!3.64e-08!194;UBERON:0001869!7.22e-08!32;UBERON:0002780!8.07e-08!41;UBERON:0001890!8.07e-08!41;UBERON:0006240!8.07e-08!41;UBERON:0001893!9.46e-08!34;UBERON:0001155!1.03e-07!9;UBERON:0002791!1.54e-07!33;UBERON:0003080!1.85e-07!42;UBERON:0000477!2.83e-07!286;UBERON:0002020!3.57e-07!34;UBERON:0003528!3.57e-07!34;UBERON:0000922!4.60e-07!612;UBERON:0004111!7.65e-07!241;UBERON:0003076!8.29e-07!15;UBERON:0003057!8.29e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;8.08e-18;11!UBERON:0000970;1.86e-15;20!UBERON:0002104;1.43e-14;21!UBERON:0001456;1.43e-14;21!UBERON:0000019;5.58e-14;19!UBERON:0000047;5.58e-14;19!UBERON:0004088;5.58e-14;19!UBERON:0010230;5.58e-14;19!UBERON:0000020;4.97e-13;23!UBERON:0001032;2.34e-12;24!UBERON:0004456;2.34e-12;24!UBERON:0000966;8.98e-11;5!UBERON:0005388;8.98e-11;5!UBERON:0001802;8.98e-11;5!UBERON:0010371;4.15e-10;31!UBERON:0000488;3.72e-09;4!UBERON:0002037;8.07e-09;6!UBERON:0004733;9.36e-08;12!UBERON:0002028;9.36e-08;12!UBERON:0001778;1.87e-07;3!UBERON:0001775;1.87e-07;3!UBERON:0004732;4.43e-07;13!UBERON:0001801;8.14e-07;14!UBERON:0001781;9.38e-07;3!UBERON:0001782;9.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,5.24e-18,11;UBERON:0000970,1.18e-14,21;UBERON:0002104,1.18e-14,21;UBERON:0003075,1.95e-14,82;UBERON:0007284,1.95e-14,82;UBERON:0001456,7.24e-14,22;UBERON:0010371,8.78e-14,104;UBERON:0002346,2.03e-13,86;UBERON:0000019,2.86e-13,20;UBERON:0000047,2.86e-13,20;UBERON:0010312,2.86e-13,20;UBERON:0004088,2.86e-13,20;UBERON:0010230,2.86e-13,20;UBERON:0003072,2.86e-13,20;UBERON:0004128,2.86e-13,20;UBERON:0003071,2.86e-13,20;UBERON:0004121,6.16e-13,171;UBERON:0000924,6.16e-13,171;UBERON:0006601,6.16e-13,171;UBERON:0000020,1.98e-12,24;UBERON:0001032,1.98e-12,24;UBERON:0004456,1.98e-12,24;UBERON:0001016,1.19e-11,89;UBERON:0001017,2.07e-11,81;UBERON:0003056,1.80e-10,61;UBERON:0011216,9.91e-10,223;UBERON:0000966,3.28e-09,6;UBERON:0005388,3.28e-09,6;UBERON:0001802,3.28e-09,6;UBERON:0000488,4.09e-09,4;UBERON:0002037,6.35e-09,6;UBERON:0006215,6.35e-09,6;UBERON:0010314,2.21e-08,132;UBERON:0004733,8.48e-08,12;UBERON:0002028,8.48e-08,12;UBERON:0007277,8.48e-08,12;UBERON:0000119,9.45e-08,309;UBERON:0001778,1.31e-07,3;UBERON:0001775,1.31e-07,3;UBERON:0005085,1.34e-07,31;UBERON:0000483,1.97e-07,306;UBERON:0004732,4.05e-07,13;UBERON:0001782,4.35e-07,3;UBERON:0005424,4.35e-07,3;UBERON:0001801,9.30e-07,14 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0,0,0,0,0,2.83178433576612,1.42800483870977,2.19418305034661,6.29719171688325,1.09499540058307,5.27279086298172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,6.71197201864882,1.77383517970051,2.89854792787316,0.785874452986276,0,0,0,0,0,0,0,0,0.39752481473341,0,0,1.69592382577203,0.838998872419812,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0,0.732806975721629,0,0,0,0,0.12663051166458,0.264818361626438,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,0,0,0.600952235626387,0.113432183160021,0,0.213557388818567,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0.265059536642971,0.580969714347592,1.96956004529204,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,1.77236972004421,0,3.93563003337963,1.02940686179115,0,0,0,0,0,0,1.44331342025273,9.39036280298122,1.40890433082986,0,0,0,10.2726571734706,4.29243081047436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3185914926808,17.9534560012391,17.582617081507,6.84289784090821,6.78661451841935,6.30720421472227,42.8739648945867,0.224262168690721,1.74384027533312,0,0.258543431515556,0,0,0.531876233169741,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,2.03275699377971,37.7405576187103,22.4253755705532,18.4267891867784,8.93114252314428,0,0,0,0.36807447515742,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0.664225598535437,0,0,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,1.57117284469109,0,0,0.229628896329213,0.182091168006717,1.57349297951309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79515087581472,1.96808787419823,1.62689197332152,0.618246069886334,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0.322260734604821,0,0.170453254832202,0.712256285173899,0,0,0,0,0,0,0,0,0.532306030317022,0.869932992075073,0,0.143124886741991,0,0.632758849437452,0,0.255897791311334,0,0,0.78494864019923,1.61885211824983,0.823611089208164,0.353437207037059,0,0,0.421258456238981,0,0.487426979262569,0,0.272999822815972,0.141405431953713,0,0,0,0,0.578775534266688,0.655894752046633,0.202910376962704,0,0,0.286822704408103,0,0,0,0.633322905892992,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0,0,0.422250816255987,0.398495976502139,0.828851746593443,5.54252045279407,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,11.9768278800717,5.98983850496036,0.349839999984783,0,0,0.254253650292766,0,1.37897349296586,0,0,0.885741385813839,0.241192877250816,0,1.87984741883082,1.47773809476774,0,0,0,0.307801034015188,0,0,0,0.108647371922008,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,3.67517985728246,6.92443647174692,0.995261931078505,0.796118080530053,0.611030144933625,0,0,0,0.202203398942031,0,0,0,0,0,0,1.20990716048664,33.3619310177234,1.26373159256976,0.300646838828985,0.414752765588989,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,1.35588444468319,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0,1.71594997861965,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.916641696046735,0,0.798716001995964,4.72148652950228,0.89268582976749,1.81395375714161,0,0,20.4836273998781,21.9226183293903,23.5912403489647,0,0,0,0.136203406111576,0.964518890790115,1.37539436597234,1.66176135211674,0,0,0.364497339948148,0,0,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.732761168390412,1.32506888912221,0,0.26446520348538,0,0,4.27149650270779,12.2619357977739,8.28478110694391,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0.3755727921195,1.72022758707021,1.22021956690538,0.558867626472451,0,0,1.06154382279153,1.14186133417987,0,2.34167452903441,12.6081294891418,0,0.233713309847224,0,0,0,0,0.228840068396924,0,3.26418121223839,0.295710299979268,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0.545545977607678,0.107410557042488,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,1.79052119825112,0,2.67352101155024,0,0.33946505990805,0,0.123935764259002,0,0,0,0,1.41070377476274,0.918736432059601,0.449604575675217,0,0,0,23.4426677486198,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0.690359926060101,2.78482710962785,0,0,0.781514011233092,0,0,0.147856086217045,0.0675375846183947,0,0.206686796501184,0.126831620387814,44.851934339494,0,0,0,0,2.14280734351315,0.672567444437648,1.82089681270989,0,0,0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| ||
|short_description=p7@NHSL1 | |short_description=p7@NHSL1 | ||
}} | }} |
Latest revision as of 05:11, 25 September 2015
Short description: | p7@NHSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NHSL1_5end |
Coexpression cluster: | C3731_temporal_Neural_parietal_Melanocyte_duodenum_occipital_Neurons |
Association with transcript: | 0bp_to_ENST00000427025, NM_020464, uc003qhx.2_5end |
EntrezGene: | NHSL1 |
HGNC: | 21021 |
UniProt: | Q5SYE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.70e-26 | 59 |
pigment cell | 6.93e-22 | 14 |
ectodermal cell | 2.74e-20 | 72 |
neural cell | 4.83e-18 | 25 |
migratory neural crest cell | 1.22e-16 | 41 |
melanocyte | 5.26e-15 | 10 |
melanoblast | 5.26e-15 | 10 |
columnar/cuboidal epithelial cell | 5.07e-14 | 27 |
neuronal stem cell | 7.04e-14 | 8 |
neurecto-epithelial cell | 1.51e-12 | 20 |
oligodendrocyte | 4.98e-11 | 7 |
macroglial cell | 4.98e-11 | 7 |
astrocyte | 4.98e-11 | 7 |
oligodendrocyte precursor cell | 4.98e-11 | 7 |
neuron | 9.28e-10 | 6 |
neuroblast | 9.28e-10 | 6 |
electrically signaling cell | 9.28e-10 | 6 |
visual pigment cell | 3.14e-09 | 4 |
ecto-epithelial cell | 4.38e-09 | 34 |
light melanocyte | 2.11e-08 | 3 |
neuron associated cell | 4.44e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 4.44e-08 | 17 |
ciliated cell | 1.31e-07 | 3 |
ciliated epithelial cell | 1.31e-07 | 3 |
multi-ciliated epithelial cell | 1.31e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.31e-07 | 3 |
astrocyte of the cerebral cortex | 2.06e-07 | 3 |
astrocyte of the cerebellum | 3.07e-07 | 3 |
retinal pigment epithelial cell | 4.35e-07 | 3 |