FFCP PHASE1:Hg19::chr19:42006553..42006555,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:42006553..42006555,-
|short_description=p1@LOC100505495
|description=CAGE_peak_1_at_LOC100505495_5end
|association_with_transcript=0bp_to_NR_040109,uc002o...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100505495 | |EntrezGene=100505495 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_040109,uc002orb.3,uc010ehv.2,uc010ehw.2_5end | |||
|cluster_id=chr19:42006553..42006555,- | |||
|coexpression_cluster_id=C357 | |||
|description=CAGE_peak_1_at_LOC100505495_5end | |||
|id=chr19:42006553..42006555,- | |||
|ontology_enrichment_celltype=CL:0000115!1.41e-29!35;CL:0002139!6.17e-29!24;CL:0002078!2.72e-21!44;CL:0000071!1.33e-20!18;CL:0002546!1.33e-20!18;CL:0000213!4.18e-14!57;CL:0000215!4.18e-14!57;CL:1000413!1.37e-10!9;CL:0005020!5.51e-10!6;CL:0002138!5.51e-10!6;CL:0005022!5.51e-10!6;CL:0002544!1.40e-07!6;CL:0002543!1.93e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.29e-34;24!CL:0000115;4.43e-30;36!CL:0000071;1.26e-23;18!CL:0002078;3.23e-17;45!CL:0002138;1.59e-12;6!CL:0000213;1.61e-11;58!CL:0000215;1.61e-11;58!CL:1000413;5.27e-11;9!CL:0002543;6.33e-09;6!CL:0002544;2.42e-07;6!CL:0002144;3.20e-07;3!CL:0002188;5.56e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.64e-36,36;CL:0002139,1.02e-34,24;CL:0002078,5.54e-27,45;CL:0000071,5.81e-24,18;CL:0002546,5.81e-24,18;CL:0000213,7.69e-19,58;CL:0000215,7.69e-19,58;CL:0005020,1.62e-12,6;CL:0002138,1.62e-12,6;CL:0005022,1.62e-12,6;CL:1000413,4.72e-11,9;CL:0002543,3.25e-09,6;CL:0002144,3.22e-07,3;CL:0002544,3.44e-07,6;CL:0002188,5.64e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;1.26e-23;18!CL:0005022;1.59e-12;6!UBERON:0004872;3.44e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.89e-41,114;UBERON:0004111,1.88e-24,240;UBERON:0004638,5.81e-24,18;UBERON:0001986,5.81e-24,18;UBERON:0004852,5.81e-24,18;UBERON:0000025,9.49e-22,192;UBERON:0000487,1.11e-18,22;UBERON:0006914,7.57e-16,25;UBERON:0000055,1.03e-15,68;UBERON:0001049,1.76e-14,56;UBERON:0005068,1.76e-14,56;UBERON:0006241,1.76e-14,56;UBERON:0007135,1.76e-14,56;UBERON:0002049,1.43e-12,78;UBERON:0007798,1.43e-12,78;UBERON:0000073,4.58e-12,53;UBERON:0002616,4.58e-12,53;UBERON:0002780,1.75e-11,41;UBERON:0001890,1.75e-11,41;UBERON:0003080,1.75e-11,41;UBERON:0006240,1.75e-11,41;UBERON:0003075,3.32e-11,82;UBERON:0007284,3.32e-11,82;UBERON:0003915,4.72e-11,9;UBERON:0004700,4.72e-11,9;UBERON:0001917,4.72e-11,9;UBERON:0001009,6.40e-11,112;UBERON:0000483,7.15e-11,306;UBERON:0003528,8.91e-11,34;UBERON:0002020,8.91e-11,34;UBERON:0004872,1.04e-10,83;UBERON:0007500,1.11e-10,59;UBERON:0001981,1.11e-10,59;UBERON:0004537,1.11e-10,59;UBERON:0006965,1.11e-10,59;UBERON:0000119,1.36e-10,309;UBERON:0002346,2.61e-10,86;UBERON:0003914,1.61e-09,117;UBERON:0002465,3.52e-09,10;UBERON:0001473,4.28e-09,8;UBERON:0004536,4.28e-09,8;UBERON:0006558,4.28e-09,8;UBERON:0002791,5.38e-09,32;UBERON:0004535,5.92e-09,109;UBERON:0010314,2.77e-08,132;UBERON:0001893,2.96e-08,34;UBERON:0000125,4.38e-08,9;UBERON:0002308,4.38e-08,9;UBERON:0001638,4.65e-08,9;UBERON:0003920,4.65e-08,9;UBERON:0004582,4.65e-08,9;UBERON:0010371,6.67e-08,104;UBERON:0001869,6.78e-08,32;UBERON:0000955,7.51e-08,68;UBERON:0006238,7.51e-08,68;UBERON:0001017,1.09e-07,81;UBERON:0010523,3.22e-07,3;UBERON:0001915,3.22e-07,3;UBERON:0001982,3.22e-07,3;UBERON:0003056,8.04e-07,61;UBERON:0003103,9.23e-07,68 | |||
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| ||
|short_description=p1@LOC100505495 | |||
}} | }} |
Latest revision as of 05:53, 18 September 2015
Short description: | p1@LOC100505495 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100505495_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | 0bp_to_NR_040109, uc002orb.3, uc010ehv.2, uc010ehw.2_5end |
EntrezGene: | LOC100505495 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.64e-36 | 36 |
endothelial cell of vascular tree | 1.02e-34 | 24 |
meso-epithelial cell | 5.54e-27 | 45 |
blood vessel endothelial cell | 5.81e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.81e-24 | 18 |
lining cell | 7.69e-19 | 58 |
barrier cell | 7.69e-19 | 58 |
lymphangioblast | 1.62e-12 | 6 |
endothelial cell of lymphatic vessel | 1.62e-12 | 6 |
vascular lymphangioblast | 1.62e-12 | 6 |
endothelial cell of artery | 4.72e-11 | 9 |
vein endothelial cell | 3.25e-09 | 6 |
capillary endothelial cell | 3.22e-07 | 3 |
aortic endothelial cell | 3.44e-07 | 6 |
glomerular endothelial cell | 5.64e-07 | 5 |