FFCP PHASE1:Hg19::chr7:54614634..54614654,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222008 | |EntrezGene=222008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28499 | |HGNC=28499 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000469952_5end | |association_with_transcript=-31bp_to_ENST00000469952_5end | ||
|cluster_id=chr7:54614634..54614654,+ | |||
|coexpression_cluster_id=C16 | |coexpression_cluster_id=C16 | ||
|description=CAGE_peak_21_at_VSTM2A_5end | |description=CAGE_peak_21_at_VSTM2A_5end | ||
|id=chr7:54614634..54614654,+ | |id=chr7:54614634..54614654,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!2.99e-58!32;UBERON:0002020!9.51e-55!34;UBERON:0003528!9.51e-55!34;UBERON:0001893!1.17e-54!34;UBERON:0002780!1.65e-54!41;UBERON:0001890!1.65e-54!41;UBERON:0006240!1.65e-54!41;UBERON:0003080!4.01e-53!42;UBERON:0001950!3.43e-52!20;UBERON:0002791!8.68e-51!33;UBERON:0001049!1.26e-49!57;UBERON:0005068!1.26e-49!57;UBERON:0006241!1.26e-49!57;UBERON:0007135!1.26e-49!57;UBERON:0002616!8.73e-48!59;UBERON:0002619!2.32e-47!22;UBERON:0000955!6.77e-47!69;UBERON:0006238!6.77e-47!69;UBERON:0000073!4.64e-44!94;UBERON:0001016!4.64e-44!94;UBERON:0005743!9.95e-43!86;UBERON:0001017!7.32e-42!82;UBERON:0000956!1.65e-41!25;UBERON:0000203!1.65e-41!25;UBERON:0007023!6.31e-39!115;UBERON:0003056!1.13e-38!61;UBERON:0003075!8.15e-37!86;UBERON:0007284!8.15e-37!86;UBERON:0002346!6.18e-35!90;UBERON:0000033!1.45e-30!123;UBERON:0000153!7.17e-29!129;UBERON:0007811!7.17e-29!129;UBERON:0004121!1.03e-23!169;UBERON:0001871!4.20e-23!7;UBERON:0000924!5.08e-23!173;UBERON:0006601!5.08e-23!173;UBERON:0000200!3.96e-21!6;UBERON:0002420!1.23e-20!9;UBERON:0007245!1.23e-20!9;UBERON:0010009!1.23e-20!9;UBERON:0010011!1.23e-20!9;UBERON:0000454!1.23e-20!9;UBERON:0001872!8.26e-17!5;UBERON:0002771!3.78e-16!3;UBERON:0002308!2.11e-14!9;UBERON:0000125!2.11e-14!9;UBERON:0000369!1.87e-12!4;UBERON:0002435!1.87e-12!4;UBERON:0000204!1.87e-12!4;UBERON:0010082!1.87e-12!4;UBERON:0009663!3.14e-12!7;UBERON:0000025!5.99e-12!194;UBERON:0001876!1.06e-11!2;UBERON:0000349!4.83e-10!5;UBERON:0002021!6.35e-10!5;UBERON:0000064!6.58e-10!219;UBERON:0004111!1.91e-09!241;UBERON:0005383!4.35e-08!3;UBERON:0005382!4.35e-08!3;UBERON:0000477!6.97e-08!286;UBERON:0000988!1.58e-07!3;UBERON:0000475!7.39e-07!365;UBERON:0000483!8.20e-07!309;UBERON:0001874!8.81e-07!1;UBERON:0003112!9.81e-07!1;UBERON:0000032!9.81e-07!1;UBERON:0005253!9.81e-07!1;UBERON:0003128!9.81e-07!1;UBERON:0002241!9.81e-07!1;UBERON:0001703!9.81e-07!1;UBERON:0004761!9.81e-07!1;UBERON:0009617!9.81e-07!1 | |ontology_enrichment_uberon=UBERON:0001869!2.99e-58!32;UBERON:0002020!9.51e-55!34;UBERON:0003528!9.51e-55!34;UBERON:0001893!1.17e-54!34;UBERON:0002780!1.65e-54!41;UBERON:0001890!1.65e-54!41;UBERON:0006240!1.65e-54!41;UBERON:0003080!4.01e-53!42;UBERON:0001950!3.43e-52!20;UBERON:0002791!8.68e-51!33;UBERON:0001049!1.26e-49!57;UBERON:0005068!1.26e-49!57;UBERON:0006241!1.26e-49!57;UBERON:0007135!1.26e-49!57;UBERON:0002616!8.73e-48!59;UBERON:0002619!2.32e-47!22;UBERON:0000955!6.77e-47!69;UBERON:0006238!6.77e-47!69;UBERON:0000073!4.64e-44!94;UBERON:0001016!4.64e-44!94;UBERON:0005743!9.95e-43!86;UBERON:0001017!7.32e-42!82;UBERON:0000956!1.65e-41!25;UBERON:0000203!1.65e-41!25;UBERON:0007023!6.31e-39!115;UBERON:0003056!1.13e-38!61;UBERON:0003075!8.15e-37!86;UBERON:0007284!8.15e-37!86;UBERON:0002346!6.18e-35!90;UBERON:0000033!1.45e-30!123;UBERON:0000153!7.17e-29!129;UBERON:0007811!7.17e-29!129;UBERON:0004121!1.03e-23!169;UBERON:0001871!4.20e-23!7;UBERON:0000924!5.08e-23!173;UBERON:0006601!5.08e-23!173;UBERON:0000200!3.96e-21!6;UBERON:0002420!1.23e-20!9;UBERON:0007245!1.23e-20!9;UBERON:0010009!1.23e-20!9;UBERON:0010011!1.23e-20!9;UBERON:0000454!1.23e-20!9;UBERON:0001872!8.26e-17!5;UBERON:0002771!3.78e-16!3;UBERON:0002308!2.11e-14!9;UBERON:0000125!2.11e-14!9;UBERON:0000369!1.87e-12!4;UBERON:0002435!1.87e-12!4;UBERON:0000204!1.87e-12!4;UBERON:0010082!1.87e-12!4;UBERON:0009663!3.14e-12!7;UBERON:0000025!5.99e-12!194;UBERON:0001876!1.06e-11!2;UBERON:0000349!4.83e-10!5;UBERON:0002021!6.35e-10!5;UBERON:0000064!6.58e-10!219;UBERON:0004111!1.91e-09!241;UBERON:0005383!4.35e-08!3;UBERON:0005382!4.35e-08!3;UBERON:0000477!6.97e-08!286;UBERON:0000988!1.58e-07!3;UBERON:0000475!7.39e-07!365;UBERON:0000483!8.20e-07!309;UBERON:0001874!8.81e-07!1;UBERON:0003112!9.81e-07!1;UBERON:0000032!9.81e-07!1;UBERON:0005253!9.81e-07!1;UBERON:0003128!9.81e-07!1;UBERON:0002241!9.81e-07!1;UBERON:0001703!9.81e-07!1;UBERON:0004761!9.81e-07!1;UBERON:0009617!9.81e-07!1 | ||
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|short_description=p21@VSTM2A | |short_description=p21@VSTM2A | ||
}} | }} |
Latest revision as of 00:12, 19 September 2015
Short description: | p21@VSTM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_VSTM2A_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -31bp_to_ENST00000469952_5end |
EntrezGene: | VSTM2A |
HGNC: | 28499 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data