FFCP PHASE1:Hg19::chr19:55014085..55014120,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:55014085..55014120,+
|short_description=p1@LAIR2
|description=CAGE_peak_1_at_LAIR2_5end
|association_with_transcript=-2bp_to_ENST00000351841_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3904 | |EntrezGene=3904 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6478 | |HGNC=6478 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000351841_5end | |||
|cluster_id=chr19:55014085..55014120,+ | |||
|description=CAGE_peak_1_at_LAIR2_5end | |||
|id=chr19:55014085..55014120,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.46e-54!140;CL:0002031!1.24e-51!124;CL:0002087!7.52e-51!119;CL:0000037!7.07e-49!172;CL:0000566!7.07e-49!172;CL:0000988!2.43e-47!182;CL:0002032!2.74e-45!165;CL:0000837!2.74e-45!165;CL:0002057!1.86e-37!42;CL:0000860!8.59e-34!45;CL:0000839!1.31e-30!70;CL:0000766!6.52e-29!76;CL:0000557!1.42e-27!71;CL:0002194!3.57e-27!63;CL:0000576!3.57e-27!63;CL:0000040!3.57e-27!63;CL:0000559!3.57e-27!63;CL:0002009!8.74e-26!65;CL:0000763!8.55e-24!112;CL:0000049!8.55e-24!112;CL:0000838!8.80e-21!52;CL:0000542!4.07e-20!53;CL:0000051!4.07e-20!53;CL:0000791!5.32e-18!18;CL:0000789!5.32e-18!18;CL:0002420!5.32e-18!18;CL:0002419!5.32e-18!18;CL:0000790!5.32e-18!18;CL:0000084!1.57e-16!25;CL:0000827!1.57e-16!25;CL:0000625!1.05e-11!11;CL:0000134!6.70e-09!358;CL:0002393!2.72e-08!9;CL:0002397!2.72e-08!9;CL:0002320!3.58e-08!365;CL:0000624!9.19e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.51e-42;33!CL:0002057;4.51e-42;33!CL:0000473;1.30e-32;39!CL:0000234;1.30e-32;39!CL:0000576;2.12e-30;48!CL:0000791;5.70e-27;18!CL:0000789;5.70e-27;18!CL:0002419;5.70e-27;18!CL:0000766;3.75e-23;69!CL:0000084;2.65e-20;25!CL:0002087;1.31e-18;104!CL:0000625;3.36e-17;11!CL:0000738;8.43e-12;136!CL:0000763;6.64e-11;100!CL:0000624;1.25e-09;6!CL:0000542;9.70e-09;53!CL:0000988;1.56e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.83e-59,136;CL:0002031,6.44e-58,120;CL:0002087,1.80e-57,115;CL:0000860,1.43e-54,42;CL:0002057,1.43e-54,42;CL:0000473,1.79e-51,48;CL:0000234,1.79e-51,48;CL:0000037,2.82e-50,168;CL:0000988,4.52e-49,177;CL:0002032,5.40e-49,161;CL:0000837,5.40e-49,161;CL:0000766,4.00e-44,72;CL:0000839,1.75e-42,66;CL:0000557,1.25e-41,67;CL:0002194,3.35e-40,59;CL:0000576,3.35e-40,59;CL:0000040,3.35e-40,59;CL:0000559,3.35e-40,59;CL:0002009,1.92e-38,61;CL:0000763,1.25e-30,108;CL:0000049,1.25e-30,108;CL:0000791,6.31e-27,18;CL:0000789,6.31e-27,18;CL:0002420,6.31e-27,18;CL:0002419,6.31e-27,18;CL:0000790,6.31e-27,18;CL:0000084,2.87e-20,25;CL:0000827,2.87e-20,25;CL:0000625,3.39e-17,11;CL:0000838,1.34e-16,52;CL:0000542,3.97e-16,53;CL:0000051,3.97e-16,53;CL:0000134,5.47e-14,354;CL:0002320,2.84e-13,361;CL:0000219,8.67e-11,386;CL:0002393,9.76e-10,9;CL:0002397,9.76e-10,9;CL:0000624,1.36e-09,6;CL:0000048,7.42e-08,427;CL:0000034,9.80e-08,441;CL:0000723,1.83e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.80e-39;42!CL:0000790;5.70e-27;18!CL:0000049;6.99e-10;108!CL:0000051;9.70e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.16e-38!102;UBERON:0003061!1.16e-38!102;UBERON:0002193!6.14e-35!112;UBERON:0002371!2.75e-24!80;UBERON:0001474!3.02e-21!86;UBERON:0002405!2.05e-19!115;UBERON:0004765!2.29e-15!101;UBERON:0001434!2.29e-15!101;UBERON:0000178!3.97e-13!15;UBERON:0000179!3.97e-13!15;UBERON:0000463!3.97e-13!15;UBERON:0007023!1.85e-09!115;UBERON:0003081!7.06e-09!216;UBERON:0002384!3.30e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.26e-15;15!UBERON:0000179;6.26e-15;15!UBERON:0000463;6.26e-15;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.50e-51,98;UBERON:0003061,3.50e-51,98;UBERON:0002193,1.24e-44,108;UBERON:0002371,5.79e-35,76;UBERON:0002405,9.96e-32,93;UBERON:0001474,2.44e-31,82;UBERON:0004765,2.84e-27,90;UBERON:0001434,3.98e-23,100;UBERON:0003081,1.96e-17,203;UBERON:0000178,5.66e-15,15;UBERON:0000179,5.66e-15,15;UBERON:0000463,5.66e-15,15;UBERON:0002384,2.65e-12,371;UBERON:0002204,1.09e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,14.9478425202584,12.666370137208,14.0882672217629,0,0,0,0,0,0.587200878669695,1.10799081706375,0.601633342410425,1.08505435357926,0.223915474239924,1.29557466407592,0,5.23433659606433,10.9584023669755,16.9808842831471,9.76201955003875,15.2132118568076,13.9367866902797,2.58923153089935,4.61089271752381,6.85798466676897,7.58440497620561,10.3277549373412,13.5426486594342,3.20011977222428,11.4620583024295,9.43838634669355,14.9981107261742,23.4278189765548,28.7701706609569,1.64925650093358,4.78712778291916,6.81959600852311,12.4789972610291,19.8584828641899,29.272645702792,1.7587406567972,5.21482918420201,3.69221035998698,7.87019353423379,12.8897172595648,13.607882659958,12.0415513197807,7.44115049877652,10.063614984402,2.2465726229299,4.20495299956218,4.50031642751824,1.71007646244749,6.16641699317179,8.76787938070243,0,3.27683166757279,1.77901850772711,0.426730222566507,0.800791974072025,0.574752439954483,1.98313461835459,2.86216126360609,0,0.587237189370939,0,1.32171328579026,0.560508562981536,3.423993102076,1.180258620683,3.14408610199332,7.81285696198135,58.5152733867373,32.2663043967255,27.4599727326145,35.068811113424,32.3090324967003,42.7178565838514,31.4578130308742,37.1001293358071,29.8452774960823,65.6799705177385,14.9638493189345,35.6491522943744,21.4454283443939,3.85545064221357,4.0131124213457,1.04535523804977,14.2769771798933,6.89796888483458,9.27794102803101,9.36172860472161,21.6624481740386,20.8346705234054,34.2162736001415,7.22760571573309,5.88738411310325,24.9861453104692,27.939715741194,26.2760959014735,3.22570789159572,4.01160293675261,3.91025890483557,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.392937226493138,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63509977684647,6.21984346622316,7.20599767084807,7.5745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.72990245129524,8.53837055434615,0,0,0,0,0,0,0,101.212885026155,4.13764596424047,4.31255149719035,6.03212270514817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71809722777571,0.647142602455851,3.62873696531711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,5.07447609232169,7.64637207142375,9.68400218196076,3.33524485640905,2.87953591160336,11.6725196014689,9.72056587028607,12.6900028207083,0,0,0,0,0,0.355709216742071,0,0,1.1490322207942,0,9.73865820823666,0,0,0,5.01268954180134,3.55512733383367,0.1605880751037,0,0,0,0,0,0,0,1.67043704337145,0,0.540911356951966,0,0,0,0,0,0.111443384277478,0,4.7748896947538,0.593929361665277,0,0,0,0,0,0,0,0.552567831062295,0,0,0.246169610922139,0,0,0,0,0,11.974154617347,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0,0,0,0,0,0,0,0.0769502585037971,0.797594390929008,0.23056390438806,0.897576444097721,0.217294743844016,37.6421368483665,2.47313502185028,24.5195996968572,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,1.11207545051853,1.8795950910982,0.134802265961354,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,31.2835951592384,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0.0674035438541849,0,1.35477331305255,0,0,0,0,0,0,0,0.728994679896296,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0,0,0,0.747511887973863,0.314408610199332,0.414239055347196,0.496166021811951,0.790446527591777,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0.244052529803926,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.531459361253452,0.163565394255844,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,1.24415452006595,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.206686796501184,0.19024743058172,0,0,0.496211178389294,0,0,0.535701835878287,0,1.21393120847326,0.682986574053893,6.03176117105944,0.691403925334676,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,22.4934636914344,0,0.218559560503957,0.470317296361523,0,0,0.588925401344836,0.297046400327086,0.4226557275834,0,0.0939839179798536,0.322289439867886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| ||
|short_description=p1@LAIR2 | |||
}} | }} |
Latest revision as of 22:51, 19 September 2015
Short description: | p1@LAIR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LAIR2_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000351841_5end |
EntrezGene: | LAIR2 |
HGNC: | 6478 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.50e-51 | 98 |
blood island | 3.50e-51 | 98 |
hemolymphoid system | 1.24e-44 | 108 |
bone marrow | 5.79e-35 | 76 |
immune system | 9.96e-32 | 93 |
bone element | 2.44e-31 | 82 |
skeletal element | 2.84e-27 | 90 |
skeletal system | 3.98e-23 | 100 |
lateral plate mesoderm | 1.96e-17 | 203 |
blood | 5.66e-15 | 15 |
haemolymphatic fluid | 5.66e-15 | 15 |
organism substance | 5.66e-15 | 15 |
connective tissue | 2.65e-12 | 371 |
musculoskeletal system | 1.09e-08 | 167 |