FFCP PHASE1:Hg19::chr1:116245594..116245605,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:116245594..116245605,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_at_chr1:116245594..116245605,- | |description=CAGE_peak_at_chr1:116245594..116245605,- | ||
|id=chr1:116245594..116245605,- | |id=chr1:116245594..116245605,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000188!4.67e-07!9 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:114;8.01e-24;2!DOID:178;9.92e-13;1!DOID:326;9.92e-13;1!DOID:3978;9.92e-13;1!DOID:3394;9.92e-13;1!DOID:5844;9.92e-13;1!DOID:1287;2.08e-12;4 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0005090;4.89e-23;2!UBERON:0001630;4.89e-23;2!UBERON:0000341;5.78e-23;2!UBERON:0007100;2.17e-21;25!UBERON:0004151;3.69e-16;3!UBERON:0001723;8.13e-16;3!UBERON:0001033;8.13e-16;3!UBERON:0003978;1.05e-15;3!UBERON:0000946;1.05e-15;3!UBERON:0002079;7.88e-13;1!UBERON:0002084;1.11e-12;1!UBERON:0002082;1.11e-12;1!UBERON:0000948;1.19e-12;22!UBERON:0002146;1.32e-12;1!UBERON:0002426;1.32e-12;1!UBERON:0003831;1.32e-12;1!UBERON:0003898;1.32e-12;1!UBERON:0004830;1.32e-12;1!UBERON:0005623;1.32e-12;1!UBERON:0003830;1.32e-12;1!UBERON:0005175;1.32e-12;1!UBERON:0001774;1.32e-12;1!UBERON:0001103;1.32e-12;1!UBERON:0000989;3.26e-12;1!UBERON:0002135;3.26e-12;1!UBERON:0001389;3.26e-12;1!UBERON:0000026;3.26e-12;1!UBERON:0008784;3.26e-12;1!UBERON:0006058;3.26e-12;1!UBERON:0008811;3.26e-12;1!UBERON:0003663;3.26e-12;1!UBERON:0004256;3.26e-12;1!UBERON:0004708;3.26e-12;1!UBERON:0002101;3.26e-12;1!UBERON:0004709;3.26e-12;1!UBERON:0002529;3.26e-12;1!UBERON:0010538;3.26e-12;1!UBERON:0003661;3.26e-12;1!UBERON:0010890;3.26e-12;1!UBERON:0002471;3.26e-12;1!UBERON:0001383;3.26e-12;1!UBERON:0010758;3.26e-12;1!UBERON:0010707;3.26e-12;1!UBERON:0000978;3.26e-12;1!UBERON:0002103;3.26e-12;1!UBERON:0001665;3.26e-12;1!UBERON:0003823;3.26e-12;1!UBERON:0000154;3.26e-12;1!UBERON:0010709;3.26e-12;1!UBERON:0001134;2.87e-11;16!UBERON:0002036;2.87e-11;16!UBERON:0000974;2.76e-08;6!UBERON:0002081;4.83e-07;2!UBERON:0002133;9.81e-07;2 | |ontology_enrichment_development_v019=UBERON:0010227;7.88e-13;1!UBERON:0010226;1.11e-12;1!UBERON:0004140;1.86e-12;1!UBERON:0004874;3.26e-12;1!UBERON:0005062;5.10e-12;4!UBERON:0007284;5.10e-12;4!UBERON:0008814;9.81e-07;2!UBERON:0010056;9.81e-07;2 | ||
|ontology_enrichment_disease=DOID:114!7.22e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:114;8.01e-24;2!DOID:178;9.92e-13;1!DOID:326;9.92e-13;1!DOID:3978;9.92e-13;1!DOID:3394;9.92e-13;1!DOID:5844;9.92e-13;1!DOID:1287;2.08e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.02e-24,2;DOID:178,9.92e-13,1;DOID:326,9.92e-13,1;DOID:3978,9.92e-13,1;DOID:3394,9.92e-13,1;DOID:5844,9.92e-13,1;DOID:1287,2.08e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.82e-26!115;UBERON:0001630!1.48e-09!2;UBERON:0005090!1.48e-09!2;UBERON:0000341!1.60e-09!2;UBERON:0007100!6.06e-09!27;UBERON:0003103!1.09e-08!69;UBERON:0004151!8.36e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;4.89e-23;2!UBERON:0001630;4.89e-23;2!UBERON:0000341;5.78e-23;2!UBERON:0007100;2.17e-21;25!UBERON:0004151;3.69e-16;3!UBERON:0001723;8.13e-16;3!UBERON:0001033;8.13e-16;3!UBERON:0003978;1.05e-15;3!UBERON:0000946;1.05e-15;3!UBERON:0002079;7.88e-13;1!UBERON:0002084;1.11e-12;1!UBERON:0002082;1.11e-12;1!UBERON:0000948;1.19e-12;22!UBERON:0002146;1.32e-12;1!UBERON:0002426;1.32e-12;1!UBERON:0003831;1.32e-12;1!UBERON:0003898;1.32e-12;1!UBERON:0004830;1.32e-12;1!UBERON:0005623;1.32e-12;1!UBERON:0003830;1.32e-12;1!UBERON:0005175;1.32e-12;1!UBERON:0001774;1.32e-12;1!UBERON:0001103;1.32e-12;1!UBERON:0000989;3.26e-12;1!UBERON:0002135;3.26e-12;1!UBERON:0001389;3.26e-12;1!UBERON:0000026;3.26e-12;1!UBERON:0008784;3.26e-12;1!UBERON:0006058;3.26e-12;1!UBERON:0008811;3.26e-12;1!UBERON:0003663;3.26e-12;1!UBERON:0004256;3.26e-12;1!UBERON:0004708;3.26e-12;1!UBERON:0002101;3.26e-12;1!UBERON:0004709;3.26e-12;1!UBERON:0002529;3.26e-12;1!UBERON:0010538;3.26e-12;1!UBERON:0003661;3.26e-12;1!UBERON:0010890;3.26e-12;1!UBERON:0002471;3.26e-12;1!UBERON:0001383;3.26e-12;1!UBERON:0010758;3.26e-12;1!UBERON:0010707;3.26e-12;1!UBERON:0000978;3.26e-12;1!UBERON:0002103;3.26e-12;1!UBERON:0001665;3.26e-12;1!UBERON:0003823;3.26e-12;1!UBERON:0000154;3.26e-12;1!UBERON:0010709;3.26e-12;1!UBERON:0001134;2.87e-11;16!UBERON:0002036;2.87e-11;16!UBERON:0000974;2.76e-08;6!UBERON:0002081;4.83e-07;2!UBERON:0002133;9.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,5.47e-23,2;UBERON:0001630,5.47e-23,2;UBERON:0000341,6.84e-23,2;UBERON:0007100,8.09e-20,27;UBERON:0004151,3.69e-16,3;UBERON:0003978,7.83e-16,3;UBERON:0009751,7.83e-16,3;UBERON:0000946,7.83e-16,3;UBERON:0002523,7.83e-16,3;UBERON:0005983,7.83e-16,3;UBERON:0002165,7.83e-16,3;UBERON:0002062,7.83e-16,3;UBERON:0007280,7.83e-16,3;UBERON:0001723,9.80e-16,3;UBERON:0001033,9.80e-16,3;UBERON:0010056,9.80e-16,3;UBERON:0002079,7.89e-13,1;UBERON:0002084,1.11e-12,1;UBERON:0002082,1.11e-12,1;UBERON:0010226,1.11e-12,1;UBERON:0002146,1.25e-12,1;UBERON:0005623,1.25e-12,1;UBERON:0002426,1.40e-12,1;UBERON:0003831,1.40e-12,1;UBERON:0003898,1.40e-12,1;UBERON:0004830,1.40e-12,1;UBERON:0003830,1.40e-12,1;UBERON:0005175,1.40e-12,1;UBERON:0001774,1.40e-12,1;UBERON:0001103,1.40e-12,1;UBERON:0010084,1.40e-12,1;UBERON:0002135,2.20e-12,1;UBERON:0000989,2.75e-12,1;UBERON:0008811,2.75e-12,1;UBERON:0006258,2.75e-12,1;UBERON:0005876,2.75e-12,1;UBERON:0004874,2.75e-12,1;UBERON:0003103,2.99e-12,68;UBERON:0005418,3.45e-12,1;UBERON:0001389,3.45e-12,1;UBERON:0000026,3.45e-12,1;UBERON:0008784,3.45e-12,1;UBERON:0006058,3.45e-12,1;UBERON:0003663,3.45e-12,1;UBERON:0004256,3.45e-12,1;UBERON:0004708,3.45e-12,1;UBERON:0002101,3.45e-12,1;UBERON:0004709,3.45e-12,1;UBERON:0002529,3.45e-12,1;UBERON:0010538,3.45e-12,1;UBERON:0003661,3.45e-12,1;UBERON:0010890,3.45e-12,1;UBERON:0002471,3.45e-12,1;UBERON:0001383,3.45e-12,1;UBERON:0004357,3.45e-12,1;UBERON:0004347,3.45e-12,1;UBERON:0005420,3.45e-12,1;UBERON:0005732,3.45e-12,1;UBERON:0010758,3.45e-12,1;UBERON:0010707,3.45e-12,1;UBERON:0000978,3.45e-12,1;UBERON:0002103,3.45e-12,1;UBERON:0001665,3.45e-12,1;UBERON:0003823,3.45e-12,1;UBERON:0000154,3.45e-12,1;UBERON:0010709,3.45e-12,1;UBERON:0005733,3.45e-12,1;UBERON:0005730,3.45e-12,1;UBERON:0000948,1.24e-11,24;UBERON:0005498,1.24e-11,24;UBERON:0004140,1.24e-11,24;UBERON:0009881,1.24e-11,24;UBERON:0004141,1.24e-11,24;UBERON:0003084,1.24e-11,24;UBERON:0007005,1.24e-11,24;UBERON:0004139,1.24e-11,24;UBERON:0004291,1.24e-11,24;UBERON:0007023,2.10e-08,114;UBERON:0004797,2.69e-07,7;UBERON:0002081,4.83e-07,2;UBERON:0010227,4.83e-07,2;UBERON:0002133,8.06e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,1.69160867728801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658156191461918,0,0,0,0,0,0,0.54323685961004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0,0,0,4.01288823649394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,4.35404805622199,0,6.38972801596772,19.7443982142823,0.89268582976749,2.5529719544956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,10.7204298956005,5.29673576292345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0.718639647993729,2.3196288626764,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,3.09483760902862,0,0,0,0,0.404234377916439,1.08858373948481,9.24029912930259,0.0673520530145875,0,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,1.69160867728801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658156191461918,0,0,0,0,0,0,0.54323685961004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0,0,0,4.01288823649394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,4.35404805622199,0,6.38972801596772,19.7443982142823,0.89268582976749,2.5529719544956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,10.7204298956005,5.29673576292345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0.718639647993729,2.3196288626764,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,3.09483760902862,0,0,0,0,0.404234377916439,1.08858373948481,9.24029912930259,0.0673520530145875,0,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p@chr1:116245594..116245605,- | |short_description=p@chr1:116245594..116245605,- | ||
}} | }} |
Latest revision as of 20:02, 27 July 2015
Short description: | p@chr1:116245594..116245605, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:116245594..116245605, - |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 8.02e-24 | 2 |
vascular disease | 9.92e-13 | 1 |
ischemia | 9.92e-13 | 1 |
extrinsic cardiomyopathy | 9.92e-13 | 1 |
myocardial ischemia | 9.92e-13 | 1 |
myocardial infarction | 9.92e-13 | 1 |
cardiovascular system disease | 2.08e-12 | 4 |