FFCP PHASE1:Hg19::chr6:152792884..152792913,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:152792884..152792913,- | |||
|description=CAGE_peak_at_chr6:152792884..152792913,- | |description=CAGE_peak_at_chr6:152792884..152792913,- | ||
|id=chr6:152792884..152792913,- | |id=chr6:152792884..152792913,- | ||
|ontology_enrichment_celltype=CL:0000319;1.78e-16;1!CL:0000138;3.06e-11;6!CL:0000159;6.67e-09;2!CL:0000153;8.60e-08;9!CL:0000447;8.60e-08;9 | |ontology_enrichment_celltype=CL:0000623!8.63e-07!3;CL:0000825!8.63e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000319;1.78e-16;1!CL:0000138;3.06e-11;6!CL:0000159;6.67e-09;2!CL:0000153;8.60e-08;9!CL:0000447;8.60e-08;9 | ||
|ontology_enrichment_disease=DOID:3371;5.11e-17;1!DOID:4549;5.11e-17;1!DOID:5861;5.11e-17;1!DOID:6496;5.11e-17;1!DOID:3030;1.78e-16;1 | |ontology_enrichment_celltype_v019_2=CL:0000319,1.21e-16,1;CL:0000058,3.22e-11,6;CL:0000138,3.22e-11,6;CL:0000159,5.49e-09,2;CL:0000153,8.90e-08,9;CL:0000447,8.90e-08,9 | ||
|ontology_enrichment_uberon=UBERON:0000349;3.04e-28;5!UBERON:0002420;1.98e-27;9!UBERON:0007245;1.98e-27;9!UBERON:0010009;1.98e-27;9!UBERON:0010011;1.98e-27;9!UBERON:0000454;1.98e-27;9!UBERON:0009663;3.33e-20;7!UBERON:0001874;8.18e-17;1!UBERON:0001882;1.78e-16;1!UBERON:0005403;1.78e-16;1!UBERON:0000369;2.85e-16;4!UBERON:0002435;2.85e-16;4!UBERON:0000204;2.85e-16;4!UBERON:0002791;4.21e-16;32!UBERON:0000125;7.18e-16;9!UBERON:0002308;7.18e-16;9!UBERON:0003528;9.06e-16;34!UBERON:0002020;9.06e-16;34!UBERON:0001869;3.95e-15;32!UBERON:0001893;4.56e-14;34!UBERON:0001871;1.04e-09;6!UBERON:0001954;4.01e-09;2!UBERON:0003022;4.01e-09;2!UBERON:0002421;4.01e-09;2!UBERON:0002600;4.01e-09;2!UBERON:0001876;4.52e-09;2!UBERON:0002771;6.67e-09;2!UBERON:0002360;6.67e-09;2!UBERON:0001875;6.67e-09;2!UBERON:0000094;6.67e-09;2!UBERON:0006514;6.67e-09;2!UBERON:0010743;6.67e-09;2!UBERON:0002780;7.00e-08;41!UBERON:0001890;7.00e-08;41!UBERON:0001017;1.61e-07;75!UBERON:0000955;2.69e-07;68 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;5.11e-17;1!DOID:4549;5.11e-17;1!DOID:5861;5.11e-17;1!DOID:6496;5.11e-17;1!DOID:3030;1.78e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,5.53e-17,1;DOID:4549,5.53e-17,1;DOID:5861,5.53e-17,1;DOID:6496,5.53e-17,1;DOID:3030,1.21e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0002780!3.60e-24!41;UBERON:0001890!3.60e-24!41;UBERON:0006240!3.60e-24!41;UBERON:0001893!1.04e-23!34;UBERON:0001869!1.79e-23!32;UBERON:0003080!2.02e-23!42;UBERON:0001049!4.20e-23!57;UBERON:0005068!4.20e-23!57;UBERON:0006241!4.20e-23!57;UBERON:0007135!4.20e-23!57;UBERON:0007023!9.92e-23!115;UBERON:0002791!1.70e-22!33;UBERON:0002020!9.86e-22!34;UBERON:0003528!9.86e-22!34;UBERON:0002616!2.74e-20!59;UBERON:0000955!9.35e-19!69;UBERON:0006238!9.35e-19!69;UBERON:0001017!3.71e-18!82;UBERON:0005743!4.18e-18!86;UBERON:0003075!4.53e-18!86;UBERON:0007284!4.53e-18!86;UBERON:0002346!6.03e-18!90;UBERON:0002619!7.74e-18!22;UBERON:0003056!1.82e-16!61;UBERON:0000073!1.80e-15!94;UBERON:0001016!1.80e-15!94;UBERON:0000956!2.95e-15!25;UBERON:0000203!2.95e-15!25;UBERON:0001950!1.25e-14!20;UBERON:0002420!1.64e-11!9;UBERON:0007245!1.64e-11!9;UBERON:0010009!1.64e-11!9;UBERON:0010011!1.64e-11!9;UBERON:0000454!1.64e-11!9;UBERON:0000349!2.30e-11!5;UBERON:0000033!1.71e-10!123;UBERON:0000153!1.40e-09!129;UBERON:0007811!1.40e-09!129;UBERON:0000369!2.45e-09!4;UBERON:0002435!2.45e-09!4;UBERON:0000204!2.45e-09!4;UBERON:0010082!2.45e-09!4;UBERON:0000924!3.87e-08!173;UBERON:0006601!3.87e-08!173;UBERON:0000475!4.04e-08!365;UBERON:0002308!4.96e-08!9;UBERON:0000125!4.96e-08!9;UBERON:0004121!5.33e-08!169;UBERON:0000200!6.04e-08!6;UBERON:0009663!6.85e-08!7;UBERON:0005383!2.17e-07!3;UBERON:0005382!2.17e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000349;3.04e-28;5!UBERON:0002420;1.98e-27;9!UBERON:0007245;1.98e-27;9!UBERON:0010009;1.98e-27;9!UBERON:0010011;1.98e-27;9!UBERON:0000454;1.98e-27;9!UBERON:0009663;3.33e-20;7!UBERON:0001874;8.18e-17;1!UBERON:0001882;1.78e-16;1!UBERON:0005403;1.78e-16;1!UBERON:0000369;2.85e-16;4!UBERON:0002435;2.85e-16;4!UBERON:0000204;2.85e-16;4!UBERON:0002791;4.21e-16;32!UBERON:0000125;7.18e-16;9!UBERON:0002308;7.18e-16;9!UBERON:0003528;9.06e-16;34!UBERON:0002020;9.06e-16;34!UBERON:0001869;3.95e-15;32!UBERON:0001893;4.56e-14;34!UBERON:0001871;1.04e-09;6!UBERON:0001954;4.01e-09;2!UBERON:0003022;4.01e-09;2!UBERON:0002421;4.01e-09;2!UBERON:0002600;4.01e-09;2!UBERON:0001876;4.52e-09;2!UBERON:0002771;6.67e-09;2!UBERON:0002360;6.67e-09;2!UBERON:0001875;6.67e-09;2!UBERON:0000094;6.67e-09;2!UBERON:0006514;6.67e-09;2!UBERON:0010743;6.67e-09;2!UBERON:0002780;7.00e-08;41!UBERON:0001890;7.00e-08;41!UBERON:0001017;1.61e-07;75!UBERON:0000955;2.69e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000349,3.66e-28,5;UBERON:0002420,2.12e-27,9;UBERON:0007245,2.12e-27,9;UBERON:0010009,2.12e-27,9;UBERON:0010011,2.12e-27,9;UBERON:0000454,2.12e-27,9;UBERON:0009663,3.67e-20,7;UBERON:0001874,8.86e-17,1;UBERON:0002791,1.66e-16,32;UBERON:0001869,1.66e-16,32;UBERON:0001882,2.63e-16,1;UBERON:0005403,2.63e-16,1;UBERON:0000369,3.59e-16,4;UBERON:0002435,3.59e-16,4;UBERON:0000204,3.59e-16,4;UBERON:0010082,3.59e-16,4;UBERON:0000125,7.76e-16,9;UBERON:0002308,7.76e-16,9;UBERON:0003528,1.49e-15,34;UBERON:0002020,1.49e-15,34;UBERON:0001893,1.49e-15,34;UBERON:0002780,6.29e-13,41;UBERON:0001890,6.29e-13,41;UBERON:0003080,6.29e-13,41;UBERON:0006240,6.29e-13,41;UBERON:0000073,5.29e-10,53;UBERON:0002616,5.29e-10,53;UBERON:0001871,8.72e-10,6;UBERON:0001049,1.84e-09,56;UBERON:0005068,1.84e-09,56;UBERON:0006241,1.84e-09,56;UBERON:0007135,1.84e-09,56;UBERON:0001954,4.02e-09,2;UBERON:0003022,4.02e-09,2;UBERON:0002421,4.02e-09,2;UBERON:0002600,4.02e-09,2;UBERON:0001876,4.34e-09,2;UBERON:0002771,5.08e-09,2;UBERON:0001875,5.94e-09,2;UBERON:0006514,5.94e-09,2;UBERON:0002360,6.42e-09,2;UBERON:0000094,6.42e-09,2;UBERON:0010743,6.42e-09,2;UBERON:0003056,1.12e-08,61;UBERON:0001017,1.37e-08,81;UBERON:0001016,1.07e-07,89;UBERON:0000955,1.19e-07,68;UBERON:0006238,1.19e-07,68 | |||
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|short_description=p@chr6:152792884..152792913,- | |short_description=p@chr6:152792884..152792913,- | ||
}} | }} |
Latest revision as of 21:05, 30 July 2015
Short description: | p@chr6:152792884..152792913, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:152792884..152792913, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.21e-16 | 1 |
chondroblast | 3.22e-11 | 6 |
chondrocyte | 3.22e-11 | 6 |
seromucus secreting cell | 5.49e-09 | 2 |
GAG secreting cell | 8.90e-08 | 9 |
carbohydrate secreting cell | 8.90e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 5.53e-17 | 1 |
extraosseous chondrosarcoma | 5.53e-17 | 1 |
myxoid chondrosarcoma | 5.53e-17 | 1 |
extraskeletal myxoid chondrosarcoma | 5.53e-17 | 1 |
mucinous adenocarcinoma | 1.21e-16 | 1 |