FFCP PHASE1:Hg19::chr17:46178749..46178861,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10951 | |EntrezGene=10951 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1551 | |HGNC=1551 | ||
|TSSclassifier=strong | |||
|UniProt=P83916,Q6IBN6 | |UniProt=P83916,Q6IBN6 | ||
|association_with_transcript=21bp_to_ENST00000225603,NM_001127228,uc002ine.3_5end | |association_with_transcript=21bp_to_ENST00000225603,NM_001127228,uc002ine.3_5end | ||
|cluster_id=chr17:46178749..46178861,- | |||
|description=CAGE_peak_1_at_CBX1_5end | |description=CAGE_peak_1_at_CBX1_5end | ||
|id=chr17:46178749..46178861,- | |id=chr17:46178749..46178861,- | ||
|ontology_enrichment_celltype=CL:0002319;8.54e-09;25 | |ontology_enrichment_celltype=CL:0002319!8.83e-09!25 | ||
| | |ontology_enrichment_celltype_v019=CL:0002319;8.54e-09;25 | ||
|ontology_enrichment_disease=DOID:1115;1.16e-08;20!DOID:3095;1.29e-07;22!DOID:2994;1.29e-07;22 | |ontology_enrichment_celltype_v019_2=CL:0002319,8.83e-09,25 | ||
|ontology_enrichment_uberon=UBERON:0002791;1.95e-08;32!UBERON:0003528;2.57e-08;34!UBERON:0002020;2.57e-08;34!UBERON:0001869;3.41e-08;32!UBERON:0001893;1.10e-07;34!UBERON:0001016;1.58e-07;83!UBERON:0002780;1.87e-07;41!UBERON:0001890;1.87e-07;41!UBERON:0000956;2.35e-07;25!UBERON:0000203;2.35e-07;25!UBERON:0000955;4.83e-07;68 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!7.79e-24!235;DOID:14566!3.98e-23!239;DOID:0050687!1.64e-20!143;DOID:305!2.96e-12!106;DOID:0050686!9.70e-09!137;DOID:1115!1.18e-08!20;DOID:3095!1.34e-07!22;DOID:2994!1.34e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:1115;1.16e-08;20!DOID:3095;1.29e-07;22!DOID:2994;1.29e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.79e-24,235;DOID:14566,3.98e-23,239;DOID:0050687,1.64e-20,143;DOID:305,2.96e-12,106;DOID:0050686,9.70e-09,137;DOID:1115,1.18e-08,20;DOID:3095,1.34e-07,22;DOID:2994,1.34e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.98e-19!94;UBERON:0001016!4.98e-19!94;UBERON:0001017!9.96e-18!82;UBERON:0005743!8.36e-17!86;UBERON:0000924!7.72e-15!173;UBERON:0006601!7.72e-15!173;UBERON:0004121!1.67e-14!169;UBERON:0000955!3.31e-13!69;UBERON:0006238!3.31e-13!69;UBERON:0001049!5.67e-12!57;UBERON:0005068!5.67e-12!57;UBERON:0006241!5.67e-12!57;UBERON:0007135!5.67e-12!57;UBERON:0002346!3.50e-11!90;UBERON:0003075!6.34e-11!86;UBERON:0007284!6.34e-11!86;UBERON:0003080!4.90e-10!42;UBERON:0002780!6.83e-10!41;UBERON:0001890!6.83e-10!41;UBERON:0006240!6.83e-10!41;UBERON:0002616!1.18e-09!59;UBERON:0000033!1.33e-09!123;UBERON:0002020!1.66e-09!34;UBERON:0003528!1.66e-09!34;UBERON:0000153!2.30e-09!129;UBERON:0007811!2.30e-09!129;UBERON:0003056!5.06e-09!61;UBERON:0002791!6.49e-09!33;UBERON:0001893!7.80e-09!34;UBERON:0001869!9.70e-09!32;UBERON:0000956!2.31e-07!25;UBERON:0000203!2.31e-07!25;UBERON:0000064!9.55e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.95e-08;32!UBERON:0003528;2.57e-08;34!UBERON:0002020;2.57e-08;34!UBERON:0001869;3.41e-08;32!UBERON:0001893;1.10e-07;34!UBERON:0001016;1.58e-07;83!UBERON:0002780;1.87e-07;41!UBERON:0001890;1.87e-07;41!UBERON:0000956;2.35e-07;25!UBERON:0000203;2.35e-07;25!UBERON:0000955;4.83e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.30e-20,89;UBERON:0001017,1.44e-17,81;UBERON:0004121,2.03e-13,171;UBERON:0000924,2.03e-13,171;UBERON:0006601,2.03e-13,171;UBERON:0000955,4.74e-13,68;UBERON:0006238,4.74e-13,68;UBERON:0011216,1.28e-12,223;UBERON:0001049,8.04e-12,56;UBERON:0005068,8.04e-12,56;UBERON:0006241,8.04e-12,56;UBERON:0007135,8.04e-12,56;UBERON:0000073,1.29e-10,53;UBERON:0002616,1.29e-10,53;UBERON:0002346,1.55e-10,86;UBERON:0003075,2.80e-10,82;UBERON:0007284,2.80e-10,82;UBERON:0002780,6.83e-10,41;UBERON:0001890,6.83e-10,41;UBERON:0003080,6.83e-10,41;UBERON:0006240,6.83e-10,41;UBERON:0003528,1.66e-09,34;UBERON:0002020,1.66e-09,34;UBERON:0003056,3.55e-09,61;UBERON:0010314,5.14e-09,132;UBERON:0002791,5.34e-09,32;UBERON:0001893,7.80e-09,34;UBERON:0001869,9.70e-09,32;UBERON:0010371,9.24e-08,104;UBERON:0000956,2.31e-07,25;UBERON:0000203,2.31e-07,25 | |||
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| ||
|short_description=p1@CBX1 | |short_description=p1@CBX1 | ||
}} | }} |
Latest revision as of 05:28, 25 September 2015
Short description: | p1@CBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CBX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000225603, NM_001127228, uc002ine.3_5end |
EntrezGene: | CBX1 |
HGNC: | 1551 |
UniProt: | P83916Q6IBN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.83e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.30e-20 | 89 |
central nervous system | 1.44e-17 | 81 |
ectoderm-derived structure | 2.03e-13 | 171 |
ectoderm | 2.03e-13 | 171 |
presumptive ectoderm | 2.03e-13 | 171 |
brain | 4.74e-13 | 68 |
future brain | 4.74e-13 | 68 |
organ system subdivision | 1.28e-12 | 223 |
neural tube | 8.04e-12 | 56 |
neural rod | 8.04e-12 | 56 |
future spinal cord | 8.04e-12 | 56 |
neural keel | 8.04e-12 | 56 |
regional part of nervous system | 1.29e-10 | 53 |
regional part of brain | 1.29e-10 | 53 |
neurectoderm | 1.55e-10 | 86 |
neural plate | 2.80e-10 | 82 |
presumptive neural plate | 2.80e-10 | 82 |
regional part of forebrain | 6.83e-10 | 41 |
forebrain | 6.83e-10 | 41 |
anterior neural tube | 6.83e-10 | 41 |
future forebrain | 6.83e-10 | 41 |
brain grey matter | 1.66e-09 | 34 |
gray matter | 1.66e-09 | 34 |
pre-chordal neural plate | 3.55e-09 | 61 |
structure with developmental contribution from neural crest | 5.14e-09 | 132 |
regional part of telencephalon | 5.34e-09 | 32 |
telencephalon | 7.80e-09 | 34 |
cerebral hemisphere | 9.70e-09 | 32 |
ecto-epithelium | 9.24e-08 | 104 |
cerebral cortex | 2.31e-07 | 25 |
pallium | 2.31e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.79e-24 | 235 |
disease of cellular proliferation | 3.98e-23 | 239 |
cell type cancer | 1.64e-20 | 143 |
carcinoma | 2.96e-12 | 106 |
organ system cancer | 9.70e-09 | 137 |
sarcoma | 1.18e-08 | 20 |
germ cell and embryonal cancer | 1.34e-07 | 22 |
germ cell cancer | 1.34e-07 | 22 |