FFCP PHASE1:Hg19::chr1:197170611..197170660,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:197170611..197170660,+
|short_description=p1@CRB1
|description=CAGE_peak_1_at_CRB1_5end
|association_with_transcript=19bp_to_ENST00000535699,uc010poz.1_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23418 | |EntrezGene=23418 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2343 | |HGNC=2343 | ||
|TSSclassifier=strong | |||
|UniProt=F5H0L2 | |UniProt=F5H0L2 | ||
|association_with_transcript=19bp_to_ENST00000535699,uc010poz.1_5end | |||
|cluster_id=chr1:197170611..197170660,+ | |||
|coexpression_cluster_id=C3917 | |||
|description=CAGE_peak_1_at_CRB1_5end | |||
|id=chr1:197170611..197170660,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.07e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.63e-34!115;UBERON:0001049!1.83e-26!57;UBERON:0005068!1.83e-26!57;UBERON:0006241!1.83e-26!57;UBERON:0007135!1.83e-26!57;UBERON:0002616!8.05e-23!59;UBERON:0002780!1.27e-21!41;UBERON:0001890!1.27e-21!41;UBERON:0006240!1.27e-21!41;UBERON:0003080!1.60e-21!42;UBERON:0000955!1.61e-20!69;UBERON:0006238!1.61e-20!69;UBERON:0001017!4.62e-19!82;UBERON:0002346!7.39e-19!90;UBERON:0005743!9.93e-19!86;UBERON:0003075!1.51e-18!86;UBERON:0007284!1.51e-18!86;UBERON:0000073!2.80e-17!94;UBERON:0001016!2.80e-17!94;UBERON:0002020!3.56e-17!34;UBERON:0003528!3.56e-17!34;UBERON:0001893!3.79e-17!34;UBERON:0002791!1.36e-16!33;UBERON:0001869!5.87e-16!32;UBERON:0003056!5.31e-14!61;UBERON:0000153!7.46e-14!129;UBERON:0007811!7.46e-14!129;UBERON:0002619!1.73e-12!22;UBERON:0000033!4.42e-12!123;UBERON:0000956!1.15e-11!25;UBERON:0000203!1.15e-11!25;UBERON:0001950!2.63e-11!20;UBERON:0000924!4.73e-09!173;UBERON:0006601!4.73e-09!173;UBERON:0004121!1.10e-08!169;UBERON:0002420!2.88e-07!9;UBERON:0007245!2.88e-07!9;UBERON:0010009!2.88e-07!9;UBERON:0010011!2.88e-07!9;UBERON:0000454!2.88e-07!9;UBERON:0002308!3.55e-07!9;UBERON:0000125!3.55e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.71e-17;41!UBERON:0001890;3.71e-17;41!UBERON:0003528;2.45e-16;34!UBERON:0002020;2.45e-16;34!UBERON:0001893;4.20e-16;34!UBERON:0002791;7.01e-16;32!UBERON:0001869;7.31e-16;32!UBERON:0000073;1.18e-15;53!UBERON:0002616;1.18e-15;53!UBERON:0002619;5.51e-14;22!UBERON:0000956;1.13e-12;25!UBERON:0000203;1.13e-12;25!UBERON:0001950;1.30e-12;20!UBERON:0001017;7.15e-10;75!UBERON:0007023;1.00e-09;114!UBERON:0000955;1.73e-09;68!UBERON:0002420;2.84e-08;9!UBERON:0007245;2.84e-08;9!UBERON:0010009;2.84e-08;9!UBERON:0010011;2.84e-08;9!UBERON:0000454;2.84e-08;9!UBERON:0000125;3.64e-08;9!UBERON:0002308;3.64e-08;9!UBERON:0001016;1.29e-07;83!UBERON:0001894;8.92e-07;7!UBERON:0009663;9.02e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.47e-36,114;UBERON:0001049,4.15e-29,56;UBERON:0005068,4.15e-29,56;UBERON:0006241,4.15e-29,56;UBERON:0007135,4.15e-29,56;UBERON:0000073,6.01e-27,53;UBERON:0002616,6.01e-27,53;UBERON:0002780,2.92e-24,41;UBERON:0001890,2.92e-24,41;UBERON:0003080,2.92e-24,41;UBERON:0006240,2.92e-24,41;UBERON:0000955,1.31e-21,68;UBERON:0006238,1.31e-21,68;UBERON:0002346,3.22e-20,86;UBERON:0003075,7.97e-20,82;UBERON:0007284,7.97e-20,82;UBERON:0001017,8.26e-20,81;UBERON:0003528,3.88e-19,34;UBERON:0002020,3.88e-19,34;UBERON:0001893,4.17e-19,34;UBERON:0001016,4.00e-18,89;UBERON:0002791,9.22e-18,32;UBERON:0001869,9.77e-18,32;UBERON:0003056,9.92e-16,61;UBERON:0002619,5.87e-14,22;UBERON:0010371,3.62e-13,104;UBERON:0000956,8.36e-13,25;UBERON:0000203,8.36e-13,25;UBERON:0001950,1.35e-12,20;UBERON:0010314,5.25e-12,132;UBERON:0004121,3.07e-09,171;UBERON:0000924,3.07e-09,171;UBERON:0006601,3.07e-09,171;UBERON:0002420,3.74e-08,9;UBERON:0007245,3.74e-08,9;UBERON:0010009,3.74e-08,9;UBERON:0010011,3.74e-08,9;UBERON:0000454,3.74e-08,9;UBERON:0000125,4.76e-08,9;UBERON:0002308,4.76e-08,9;UBERON:0011216,1.85e-07,223 | |||
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|short_description=p1@CRB1 | |||
}} | }} |
Latest revision as of 12:58, 19 September 2015
Short description: | p1@CRB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CRB1_5end |
Coexpression cluster: | C3917_pineal_thalamus_globus_spinal_substantia_caudate_locus |
Association with transcript: | 19bp_to_ENST00000535699, uc010poz.1_5end |
EntrezGene: | CRB1 |
HGNC: | 2343 |
UniProt: | F5H0L2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data