FFCP PHASE1:Hg19::chr19:35759824..35759891,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7392 | |EntrezGene=7392 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12594 | |HGNC=12594 | ||
|TSSclassifier=strong | |||
|UniProt=Q15853,Q6YI47 | |UniProt=Q15853,Q6YI47 | ||
|association_with_transcript=-4bp_to_ENST00000222305,ENST00000343550,NM_003367,NM_207291,uc002nyq.1,uc002nyr.1,uc002nys.1,uc002nyt.1,uc010xss.1_5end | |association_with_transcript=-4bp_to_ENST00000222305,ENST00000343550,NM_003367,NM_207291,uc002nyq.1,uc002nyr.1,uc002nys.1,uc002nyt.1,uc010xss.1_5end | ||
|cluster_id=chr19:35759824..35759891,+ | |||
|description=CAGE_peak_1_at_USF2_5end | |description=CAGE_peak_1_at_USF2_5end | ||
|id=chr19:35759824..35759891,+ | |id=chr19:35759824..35759891,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.34e-18!140;CL:0002087!1.94e-17!119;CL:0002031!2.49e-17!124;CL:0000766!3.24e-16!76;CL:0000037!3.44e-16!172;CL:0000566!3.44e-16!172;CL:0000557!5.32e-15!71;CL:0000988!6.85e-15!182;CL:0000839!7.98e-15!70;CL:0002032!1.09e-14!165;CL:0000837!1.09e-14!165;CL:0002194!1.16e-13!63;CL:0000576!1.16e-13!63;CL:0000040!1.16e-13!63;CL:0000559!1.16e-13!63;CL:0002009!4.24e-13!65;CL:0002057!2.70e-11!42;CL:0000763!1.29e-10!112;CL:0000049!1.29e-10!112;CL:0000860!2.36e-10!45 | |ontology_enrichment_celltype=CL:0000738!2.34e-18!140;CL:0002087!1.94e-17!119;CL:0002031!2.49e-17!124;CL:0000766!3.24e-16!76;CL:0000037!3.44e-16!172;CL:0000566!3.44e-16!172;CL:0000557!5.32e-15!71;CL:0000988!6.85e-15!182;CL:0000839!7.98e-15!70;CL:0002032!1.09e-14!165;CL:0000837!1.09e-14!165;CL:0002194!1.16e-13!63;CL:0000576!1.16e-13!63;CL:0000040!1.16e-13!63;CL:0000559!1.16e-13!63;CL:0002009!4.24e-13!65;CL:0002057!2.70e-11!42;CL:0000763!1.29e-10!112;CL:0000049!1.29e-10!112;CL:0000860!2.36e-10!45 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.20e-12;39!CL:0000234;2.20e-12;39!CL:0000860;5.88e-11;33!CL:0002057;5.88e-11;33!CL:0000576;8.27e-08;48!CL:0000766;3.50e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.26e-19,136;CL:0002087,5.88e-18,115;CL:0002031,8.03e-18,120;CL:0000766,5.25e-17,72;CL:0000037,1.68e-16,168;CL:0000557,8.77e-16,67;CL:0000839,1.31e-15,66;CL:0000988,2.13e-15,177;CL:0002032,5.53e-15,161;CL:0000837,5.53e-15,161;CL:0000473,9.03e-15,48;CL:0000234,9.03e-15,48;CL:0002194,1.82e-14,59;CL:0000576,1.82e-14,59;CL:0000040,1.82e-14,59;CL:0000559,1.82e-14,59;CL:0002009,7.62e-14,61;CL:0000860,2.70e-11,42;CL:0002057,2.70e-11,42;CL:0000763,6.04e-11,108;CL:0000049,6.04e-11,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.95e-30!115;UBERON:0001049!8.05e-17!57;UBERON:0005068!8.05e-17!57;UBERON:0006241!8.05e-17!57;UBERON:0007135!8.05e-17!57;UBERON:0002390!5.53e-14!102;UBERON:0003061!5.53e-14!102;UBERON:0003080!1.19e-13!42;UBERON:0002193!3.53e-13!112;UBERON:0002780!4.33e-13!41;UBERON:0001890!4.33e-13!41;UBERON:0006240!4.33e-13!41;UBERON:0002371!5.54e-13!80;UBERON:0002616!7.13e-13!59;UBERON:0003075!4.40e-12!86;UBERON:0007284!4.40e-12!86;UBERON:0002405!2.02e-11!115;UBERON:0002020!2.74e-11!34;UBERON:0003528!2.74e-11!34;UBERON:0001893!3.44e-11!34;UBERON:0002791!9.57e-11!33;UBERON:0001474!1.60e-10!86;UBERON:0000955!2.01e-10!69;UBERON:0006238!2.01e-10!69;UBERON:0001869!2.94e-10!32;UBERON:0002346!4.90e-10!90;UBERON:0005743!1.49e-09!86;UBERON:0003056!1.82e-09!61;UBERON:0001017!2.14e-09!82;UBERON:0002619!3.82e-09!22;UBERON:0001950!4.23e-08!20;UBERON:0000956!5.76e-07!25;UBERON:0000203!5.76e-07!25;UBERON:0004765!7.64e-07!101;UBERON:0001434!7.64e-07!101;UBERON:0000073!8.68e-07!94;UBERON:0001016!8.68e-07!94 | |ontology_enrichment_uberon=UBERON:0007023!9.95e-30!115;UBERON:0001049!8.05e-17!57;UBERON:0005068!8.05e-17!57;UBERON:0006241!8.05e-17!57;UBERON:0007135!8.05e-17!57;UBERON:0002390!5.53e-14!102;UBERON:0003061!5.53e-14!102;UBERON:0003080!1.19e-13!42;UBERON:0002193!3.53e-13!112;UBERON:0002780!4.33e-13!41;UBERON:0001890!4.33e-13!41;UBERON:0006240!4.33e-13!41;UBERON:0002371!5.54e-13!80;UBERON:0002616!7.13e-13!59;UBERON:0003075!4.40e-12!86;UBERON:0007284!4.40e-12!86;UBERON:0002405!2.02e-11!115;UBERON:0002020!2.74e-11!34;UBERON:0003528!2.74e-11!34;UBERON:0001893!3.44e-11!34;UBERON:0002791!9.57e-11!33;UBERON:0001474!1.60e-10!86;UBERON:0000955!2.01e-10!69;UBERON:0006238!2.01e-10!69;UBERON:0001869!2.94e-10!32;UBERON:0002346!4.90e-10!90;UBERON:0005743!1.49e-09!86;UBERON:0003056!1.82e-09!61;UBERON:0001017!2.14e-09!82;UBERON:0002619!3.82e-09!22;UBERON:0001950!4.23e-08!20;UBERON:0000956!5.76e-07!25;UBERON:0000203!5.76e-07!25;UBERON:0004765!7.64e-07!101;UBERON:0001434!7.64e-07!101;UBERON:0000073!8.68e-07!94;UBERON:0001016!8.68e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.91e-10;41!UBERON:0001890;9.91e-10;41!UBERON:0001893;1.21e-09;34!UBERON:0003528;2.02e-09;34!UBERON:0002020;2.02e-09;34!UBERON:0002791;3.11e-09;32!UBERON:0001869;3.52e-09;32!UBERON:0002619;3.82e-09;22!UBERON:0000073;4.58e-09;53!UBERON:0002616;4.58e-09;53!UBERON:0001950;4.27e-08;20!UBERON:0007023;7.88e-08;114!UBERON:0000956;6.09e-07;25!UBERON:0000203;6.09e-07;25 | |||
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| ||
|short_description=p1@USF2 | |short_description=p1@USF2 | ||
}} | }} |
Latest revision as of 11:13, 17 September 2015
Short description: | p1@USF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000222305, ENST00000343550, NM_003367, NM_207291, uc002nyq.1, uc002nyr.1, uc002nys.1, uc002nyt.1, uc010xss.1_5end |
EntrezGene: | USF2 |
HGNC: | 12594 |
UniProt: | Q15853Q6YI47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.26e-19 | 136 |
nongranular leukocyte | 5.88e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 8.03e-18 | 120 |
myeloid leukocyte | 5.25e-17 | 72 |
hematopoietic stem cell | 1.68e-16 | 168 |
granulocyte monocyte progenitor cell | 8.77e-16 | 67 |
myeloid lineage restricted progenitor cell | 1.31e-15 | 66 |
hematopoietic cell | 2.13e-15 | 177 |
hematopoietic oligopotent progenitor cell | 5.53e-15 | 161 |
hematopoietic multipotent progenitor cell | 5.53e-15 | 161 |
defensive cell | 9.03e-15 | 48 |
phagocyte | 9.03e-15 | 48 |
monopoietic cell | 1.82e-14 | 59 |
monocyte | 1.82e-14 | 59 |
monoblast | 1.82e-14 | 59 |
promonocyte | 1.82e-14 | 59 |
macrophage dendritic cell progenitor | 7.62e-14 | 61 |
classical monocyte | 2.70e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.70e-11 | 42 |
myeloid cell | 6.04e-11 | 108 |
common myeloid progenitor | 6.04e-11 | 108 |