FFCP PHASE1:Hg19::chr13:36706178..36706181,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:36706178..36706181,- | |||
|description=CAGE_peak_at_chr13:36706178..36706181,- | |description=CAGE_peak_at_chr13:36706178..36706181,- | ||
|id=chr13:36706178..36706181,- | |id=chr13:36706178..36706181,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000306;1.13e-13;4!CL:0002222;1.13e-13;4!CL:0002224;1.13e-13;4!CL:0000188;7.48e-07;9 | |ontology_enrichment_celltype_v019=CL:0000306;1.13e-13;4!CL:0002222;1.13e-13;4!CL:0002224;1.13e-13;4!CL:0000188;7.48e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.29e-13,4;CL:0002222,1.29e-13,4;CL:0002224,1.29e-13,4;CL:0000188,7.48e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.99e-50;1!UBERON:0006241;9.45e-18;3!UBERON:0003056;9.45e-18;3!UBERON:0003057;9.45e-18;3 | |ontology_enrichment_development_v019=UBERON:0005425;3.99e-50;1!UBERON:0006241;9.45e-18;3!UBERON:0003056;9.45e-18;3!UBERON:0003057;9.45e-18;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.80e-30!57;UBERON:0005068!4.80e-30!57;UBERON:0006241!4.80e-30!57;UBERON:0007135!4.80e-30!57;UBERON:0007023!7.98e-26!115;UBERON:0002616!7.50e-24!59;UBERON:0003075!5.29e-23!86;UBERON:0007284!5.29e-23!86;UBERON:0002346!1.19e-21!90;UBERON:0000955!6.27e-21!69;UBERON:0006238!6.27e-21!69;UBERON:0001017!3.45e-20!82;UBERON:0002780!1.25e-19!41;UBERON:0001890!1.25e-19!41;UBERON:0006240!1.25e-19!41;UBERON:0003080!4.58e-19!42;UBERON:0001893!5.76e-19!34;UBERON:0002020!5.91e-19!34;UBERON:0003528!5.91e-19!34;UBERON:0005743!6.01e-19!86;UBERON:0000073!3.74e-18!94;UBERON:0001016!3.74e-18!94;UBERON:0002791!3.38e-17!33;UBERON:0000153!5.15e-17!129;UBERON:0007811!5.15e-17!129;UBERON:0001869!3.50e-15!32;UBERON:0003056!4.67e-15!61;UBERON:0000033!1.84e-14!123;UBERON:0002619!5.22e-14!22;UBERON:0001950!1.04e-12!20;UBERON:0003076!1.43e-12!15;UBERON:0003057!1.43e-12!15;UBERON:0000956!4.06e-12!25;UBERON:0000203!4.06e-12!25;UBERON:0000483!6.99e-12!309;UBERON:0000025!9.77e-12!194;UBERON:0000119!1.17e-11!312;UBERON:0004121!2.21e-11!169;UBERON:0004732!2.95e-11!13;UBERON:0004151!4.19e-11!3;UBERON:0000924!6.10e-11!173;UBERON:0006601!6.10e-11!173;UBERON:0000477!3.78e-10!286;UBERON:0006331!4.08e-10!3;UBERON:0002298!5.42e-10!8;UBERON:0004111!3.88e-09!241;UBERON:0004733!5.69e-09!12;UBERON:0002028!5.69e-09!12;UBERON:0007277!5.69e-09!12;UBERON:0002308!9.59e-09!9;UBERON:0000125!9.59e-09!9;UBERON:0000200!3.02e-08!6;UBERON:0000475!4.36e-08!365;UBERON:0002081!5.66e-08!2;UBERON:0000064!7.90e-08!219;UBERON:0005162!1.06e-07!2;UBERON:0000122!1.06e-07!2;UBERON:0000481!3.86e-07!347;UBERON:0002148!5.00e-07!2;UBERON:0009662!5.00e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!4.80e-30!57;UBERON:0005068!4.80e-30!57;UBERON:0006241!4.80e-30!57;UBERON:0007135!4.80e-30!57;UBERON:0007023!7.98e-26!115;UBERON:0002616!7.50e-24!59;UBERON:0003075!5.29e-23!86;UBERON:0007284!5.29e-23!86;UBERON:0002346!1.19e-21!90;UBERON:0000955!6.27e-21!69;UBERON:0006238!6.27e-21!69;UBERON:0001017!3.45e-20!82;UBERON:0002780!1.25e-19!41;UBERON:0001890!1.25e-19!41;UBERON:0006240!1.25e-19!41;UBERON:0003080!4.58e-19!42;UBERON:0001893!5.76e-19!34;UBERON:0002020!5.91e-19!34;UBERON:0003528!5.91e-19!34;UBERON:0005743!6.01e-19!86;UBERON:0000073!3.74e-18!94;UBERON:0001016!3.74e-18!94;UBERON:0002791!3.38e-17!33;UBERON:0000153!5.15e-17!129;UBERON:0007811!5.15e-17!129;UBERON:0001869!3.50e-15!32;UBERON:0003056!4.67e-15!61;UBERON:0000033!1.84e-14!123;UBERON:0002619!5.22e-14!22;UBERON:0001950!1.04e-12!20;UBERON:0003076!1.43e-12!15;UBERON:0003057!1.43e-12!15;UBERON:0000956!4.06e-12!25;UBERON:0000203!4.06e-12!25;UBERON:0000483!6.99e-12!309;UBERON:0000025!9.77e-12!194;UBERON:0000119!1.17e-11!312;UBERON:0004121!2.21e-11!169;UBERON:0004732!2.95e-11!13;UBERON:0004151!4.19e-11!3;UBERON:0000924!6.10e-11!173;UBERON:0006601!6.10e-11!173;UBERON:0000477!3.78e-10!286;UBERON:0006331!4.08e-10!3;UBERON:0002298!5.42e-10!8;UBERON:0004111!3.88e-09!241;UBERON:0004733!5.69e-09!12;UBERON:0002028!5.69e-09!12;UBERON:0007277!5.69e-09!12;UBERON:0002308!9.59e-09!9;UBERON:0000125!9.59e-09!9;UBERON:0000200!3.02e-08!6;UBERON:0000475!4.36e-08!365;UBERON:0002081!5.66e-08!2;UBERON:0000064!7.90e-08!219;UBERON:0005162!1.06e-07!2;UBERON:0000122!1.06e-07!2;UBERON:0000481!3.86e-07!347;UBERON:0002148!5.00e-07!2;UBERON:0009662!5.00e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.99e-50;1!UBERON:0001785;3.99e-50;1!UBERON:0002464;3.99e-50;1!UBERON:0004904;3.99e-50;1!UBERON:0001021;3.99e-50;1!UBERON:0003714;7.14e-26;2!UBERON:0005162;7.14e-26;2!UBERON:0000122;7.14e-26;2!UBERON:0002240;9.45e-18;3!UBERON:0005174;9.45e-18;3!UBERON:0001137;9.45e-18;3!UBERON:0010077;1.13e-13;4!UBERON:0005389;1.13e-13;4!UBERON:0000484;1.13e-13;4!UBERON:0000965;1.13e-13;4!UBERON:0001803;1.13e-13;4!UBERON:0002104;1.77e-10;21!UBERON:0001032;2.67e-09;24!UBERON:0004456;2.67e-09;24!UBERON:0000010;8.37e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0000941;3.99e-50;1!UBERON:0001785;3.99e-50;1!UBERON:0002464;3.99e-50;1!UBERON:0004904;3.99e-50;1!UBERON:0001021;3.99e-50;1!UBERON:0003714;7.14e-26;2!UBERON:0005162;7.14e-26;2!UBERON:0000122;7.14e-26;2!UBERON:0002240;9.45e-18;3!UBERON:0005174;9.45e-18;3!UBERON:0001137;9.45e-18;3!UBERON:0010077;1.13e-13;4!UBERON:0005389;1.13e-13;4!UBERON:0000484;1.13e-13;4!UBERON:0000965;1.13e-13;4!UBERON:0001803;1.13e-13;4!UBERON:0002104;1.77e-10;21!UBERON:0001032;2.67e-09;24!UBERON:0004456;2.67e-09;24!UBERON:0000010;8.37e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.99e-50,1;UBERON:0001785,3.99e-50,1;UBERON:0002464,3.99e-50,1;UBERON:0004904,3.99e-50,1;UBERON:0001021,3.99e-50,1;UBERON:0003902,3.99e-50,1;UBERON:0005425,3.99e-50,1;UBERON:0003714,7.14e-26,2;UBERON:0005162,7.14e-26,2;UBERON:0000122,7.14e-26,2;UBERON:0002240,8.00e-18,3;UBERON:0005174,8.00e-18,3;UBERON:0001137,8.00e-18,3;UBERON:0001781,1.13e-13,4;UBERON:0010077,1.29e-13,4;UBERON:0005389,1.29e-13,4;UBERON:0000484,1.29e-13,4;UBERON:0002546,1.29e-13,4;UBERON:0000965,1.29e-13,4;UBERON:0001803,1.29e-13,4;UBERON:0003073,1.29e-13,4;UBERON:0005426,1.29e-13,4;UBERON:0000019,6.30e-11,20;UBERON:0000047,6.30e-11,20;UBERON:0010312,6.30e-11,20;UBERON:0004088,6.30e-11,20;UBERON:0010230,6.30e-11,20;UBERON:0003072,6.30e-11,20;UBERON:0004128,6.30e-11,20;UBERON:0003071,6.30e-11,20;UBERON:0000970,1.86e-10,21;UBERON:0002104,1.86e-10,21;UBERON:0001456,4.96e-10,22;UBERON:0000966,1.44e-09,6;UBERON:0005388,1.44e-09,6;UBERON:0001802,1.44e-09,6;UBERON:0000020,2.78e-09,24;UBERON:0001032,2.78e-09,24;UBERON:0004456,2.78e-09,24;UBERON:0000076,1.80e-07,8;UBERON:0005085,2.05e-07,31;UBERON:0000010,8.37e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.61560529038394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580024309752732,0,0,0,0,0,0.255679882248303,2.1367688555217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,1.19730191562487,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.998361463831671,0.372578417648301,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.319267718114302,0,0,0.138314504928436,0.161475645631851,1.42769420259154,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.570742291745161,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,1.48523200163543,0.4226557275834,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0.23806443146374,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.61560529038394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580024309752732,0,0,0,0,0,0.255679882248303,2.1367688555217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,1.19730191562487,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.998361463831671,0.372578417648301,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.319267718114302,0,0,0.138314504928436,0.161475645631851,1.42769420259154,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.570742291745161,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,1.48523200163543,0.4226557275834,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0.23806443146374,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr13:36706178..36706181,- | |short_description=p@chr13:36706178..36706181,- | ||
}} | }} |
Latest revision as of 15:48, 24 July 2015
Short description: | p@chr13:36706178..36706181, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:36706178..36706181, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.29e-13 | 4 |
vertebrate lens cell | 1.29e-13 | 4 |
lens epithelial cell | 1.29e-13 | 4 |
cell of skeletal muscle | 7.48e-07 | 9 |