FFCP PHASE1:Hg19::chr2:2336983..2336994,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:2336983..2336994,- | |||
|coexpression_cluster_id=C335 | |coexpression_cluster_id=C335 | ||
|description=CAGE_peak_at_chr2:2336983..2336994,- | |description=CAGE_peak_at_chr2:2336983..2336994,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000242!1.15e-09!2 | |ontology_enrichment_celltype=CL:0000242!1.15e-09!2 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.22e-14;3 | |ontology_enrichment_development_v019=UBERON:0006215;1.22e-14;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr2:2336983..2336994,- | |short_description=p@chr2:2336983..2336994,- | ||
}} | }} |
Latest revision as of 07:49, 29 July 2015
Short description: | p@chr2:2336983..2336994, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:2336983..2336994, - |
Coexpression cluster: | C335_cerebellum_parietal_occipital_temporal_duodenum_brain_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 5.70e-21 | 2 |
duodenum | 2.09e-14 | 2 |
regional part of nervous system | 1.93e-12 | 53 |
regional part of brain | 1.93e-12 | 53 |
neural tube | 7.99e-12 | 56 |
neural rod | 7.99e-12 | 56 |
future spinal cord | 7.99e-12 | 56 |
neural keel | 7.99e-12 | 56 |
gland of diencephalon | 3.42e-11 | 4 |
neuroendocrine gland | 3.42e-11 | 4 |
brain | 9.44e-10 | 68 |
future brain | 9.44e-10 | 68 |
regional part of forebrain | 2.66e-09 | 41 |
forebrain | 2.66e-09 | 41 |
anterior neural tube | 2.66e-09 | 41 |
future forebrain | 2.66e-09 | 41 |
parietal lobe | 2.74e-09 | 5 |
small intestine | 3.49e-09 | 4 |
neocortex | 1.37e-08 | 20 |
central nervous system | 2.54e-08 | 81 |
neural plate | 2.54e-08 | 82 |
presumptive neural plate | 2.54e-08 | 82 |
cerebellum | 5.54e-08 | 6 |
rhombic lip | 5.54e-08 | 6 |
neurectoderm | 5.76e-08 | 86 |
regional part of cerebral cortex | 6.29e-08 | 22 |
nervous system | 1.45e-07 | 89 |
cerebral cortex | 4.02e-07 | 25 |
pallium | 4.02e-07 | 25 |
temporal lobe | 5.70e-07 | 6 |
diencephalon | 6.04e-07 | 7 |
future diencephalon | 6.04e-07 | 7 |