FFCP PHASE1:Hg19::chr1:36273743..36273769,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:36273743..36273769,+
|short_description=p3@EIF2C4
|description=CAGE_peak_3_at_EIF2C4_5end
|association_with_transcript=-3bp_to_ENST00000373210_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=192670 | |EntrezGene=192670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18424 | |HGNC=18424 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCK5 | |UniProt=Q9HCK5 | ||
|association_with_transcript=-3bp_to_ENST00000373210_5end | |||
|cluster_id=chr1:36273743..36273769,+ | |||
|description=CAGE_peak_3_at_EIF2C4_5end | |||
|id=chr1:36273743..36273769,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.61e-11!172;CL:0000566!1.61e-11!172;CL:0000738!6.68e-10!140;CL:0002032!1.12e-09!165;CL:0000837!1.12e-09!165;CL:0000988!1.40e-09!182;CL:0000763!7.98e-09!112;CL:0000049!7.98e-09!112;CL:0000766!3.68e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000094;9.52e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.94e-09,168;CL:0000094,5.21e-08,8;CL:0000763,7.08e-08,108;CL:0000049,7.08e-08,108;CL:0000988,1.08e-07,177;CL:0002032,2.48e-07,161;CL:0000837,2.48e-07,161;CL:0000738,3.10e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.24e-16!115;UBERON:0001017!6.87e-16!82;UBERON:0005743!1.57e-15!86;UBERON:0000073!3.55e-15!94;UBERON:0001016!3.55e-15!94;UBERON:0001049!2.65e-13!57;UBERON:0005068!2.65e-13!57;UBERON:0006241!2.65e-13!57;UBERON:0007135!2.65e-13!57;UBERON:0000955!2.14e-11!69;UBERON:0006238!2.14e-11!69;UBERON:0002616!5.80e-11!59;UBERON:0002346!5.69e-10!90;UBERON:0002780!2.13e-09!41;UBERON:0001890!2.13e-09!41;UBERON:0006240!2.13e-09!41;UBERON:0003080!2.31e-09!42;UBERON:0003075!5.72e-09!86;UBERON:0007284!5.72e-09!86;UBERON:0001893!1.14e-07!34;UBERON:0002020!2.29e-07!34;UBERON:0003528!2.29e-07!34;UBERON:0002791!2.89e-07!33;UBERON:0001869!6.80e-07!32;UBERON:0003056!8.62e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.52e-08;53!UBERON:0002616;1.52e-08;53!UBERON:0002780;2.61e-08;41!UBERON:0001890;2.61e-08;41!UBERON:0001893;5.57e-08;34!UBERON:0001869;1.24e-07;32!UBERON:0003528;1.41e-07;34!UBERON:0002020;1.41e-07;34!UBERON:0002791;1.63e-07;32!UBERON:0000178;3.18e-07;15!UBERON:0000179;3.18e-07;15!UBERON:0000463;3.18e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.10e-17,81;UBERON:0001016,1.60e-16,89;UBERON:0007023,6.32e-16,114;UBERON:0001049,1.99e-15,56;UBERON:0005068,1.99e-15,56;UBERON:0006241,1.99e-15,56;UBERON:0007135,1.99e-15,56;UBERON:0000073,1.22e-14,53;UBERON:0002616,1.22e-14,53;UBERON:0000955,9.74e-13,68;UBERON:0006238,9.74e-13,68;UBERON:0002780,2.27e-11,41;UBERON:0001890,2.27e-11,41;UBERON:0003080,2.27e-11,41;UBERON:0006240,2.27e-11,41;UBERON:0002346,5.32e-11,86;UBERON:0003075,4.99e-10,82;UBERON:0007284,4.99e-10,82;UBERON:0001893,1.22e-09,34;UBERON:0003528,3.29e-09,34;UBERON:0002020,3.29e-09,34;UBERON:0001869,1.64e-08,32;UBERON:0002791,1.98e-08,32;UBERON:0000178,1.79e-07,15;UBERON:0000179,1.79e-07,15;UBERON:0000463,1.79e-07,15;UBERON:0003056,1.80e-07,61;UBERON:0010371,7.68e-07,104 | |||
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| ||
|short_description=p3@EIF2C4 | |||
}} | }} |
Latest revision as of 19:51, 17 September 2015
Short description: | p3@EIF2C4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EIF2C4_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000373210_5end |
EntrezGene: | EIF2C4 |
HGNC: | 18424 |
UniProt: | Q9HCK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.94e-09 | 168 |
granulocyte | 5.21e-08 | 8 |
myeloid cell | 7.08e-08 | 108 |
common myeloid progenitor | 7.08e-08 | 108 |
hematopoietic cell | 1.08e-07 | 177 |
hematopoietic oligopotent progenitor cell | 2.48e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.48e-07 | 161 |
leukocyte | 3.10e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.10e-17 | 81 |
nervous system | 1.60e-16 | 89 |
adult organism | 6.32e-16 | 114 |
neural tube | 1.99e-15 | 56 |
neural rod | 1.99e-15 | 56 |
future spinal cord | 1.99e-15 | 56 |
neural keel | 1.99e-15 | 56 |
regional part of nervous system | 1.22e-14 | 53 |
regional part of brain | 1.22e-14 | 53 |
brain | 9.74e-13 | 68 |
future brain | 9.74e-13 | 68 |
regional part of forebrain | 2.27e-11 | 41 |
forebrain | 2.27e-11 | 41 |
anterior neural tube | 2.27e-11 | 41 |
future forebrain | 2.27e-11 | 41 |
neurectoderm | 5.32e-11 | 86 |
neural plate | 4.99e-10 | 82 |
presumptive neural plate | 4.99e-10 | 82 |
telencephalon | 1.22e-09 | 34 |
brain grey matter | 3.29e-09 | 34 |
gray matter | 3.29e-09 | 34 |
cerebral hemisphere | 1.64e-08 | 32 |
regional part of telencephalon | 1.98e-08 | 32 |
blood | 1.79e-07 | 15 |
haemolymphatic fluid | 1.79e-07 | 15 |
organism substance | 1.79e-07 | 15 |
pre-chordal neural plate | 1.80e-07 | 61 |
ecto-epithelium | 7.68e-07 | 104 |