FFCP PHASE1:Hg19::chr12:122688247..122688284,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79369 | |EntrezGene=79369 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15683 | |HGNC=15683 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000545141_5end | |association_with_transcript=0bp_to_ENST00000545141_5end | ||
|cluster_id=chr12:122688247..122688284,+ | |||
|description=CAGE_peak_1_at_B3GNT4_5end | |description=CAGE_peak_1_at_B3GNT4_5end | ||
|id=chr12:122688247..122688284,+ | |id=chr12:122688247..122688284,+ | ||
|ontology_enrichment_celltype=CL:0000066!9.32e-17!254;CL:0002076!3.00e-14!43;CL:0000223!1.68e-10!59;CL:0002368!2.11e-07!13;CL:0002159!4.34e-07!13 | |ontology_enrichment_celltype=CL:0000066!9.32e-17!254;CL:0002076!3.00e-14!43;CL:0000223!1.68e-10!59;CL:0002368!2.11e-07!13;CL:0002159!4.34e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;9.95e-13;42!CL:0002368;4.93e-12;13!CL:0002159;8.62e-09;14!CL:0002202;4.19e-07;9!CL:0002632;4.19e-07;9!CL:0000240;9.41e-07;6!CL:0000311;9.41e-07;6!CL:0000079;9.41e-07;6!CL:0000237;9.41e-07;6 | |ontology_enrichment_celltype_v019=CL:0002076;9.95e-13;42!CL:0002368;4.93e-12;13!CL:0002159;8.62e-09;14!CL:0002202;4.19e-07;9!CL:0002632;4.19e-07;9!CL:0000240;9.41e-07;6!CL:0000311;9.41e-07;6!CL:0000079;9.41e-07;6!CL:0000237;9.41e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,9.74e-17,42;CL:0002368,4.55e-12,13;CL:0000223,4.45e-10,58;CL:0002159,6.12e-09,14;CL:0000066,1.40e-08,253;CL:0002202,4.20e-07,9;CL:0002632,4.20e-07,9;CL:0000240,8.16e-07,6;CL:0000311,8.16e-07,6;CL:0000079,8.16e-07,6;CL:0000237,8.16e-07,6;CL:0000036,8.16e-07,6;CL:0000357,8.16e-07,6;CL:0000114,8.16e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;9.41e-07;6!CL:0000114;9.41e-07;6 | |ontology_enrichment_development_v019=CL:0000357;9.41e-07;6!CL:0000114;9.41e-07;6 | ||
|ontology_enrichment_disease=DOID:0050687!5.38e-17!143;DOID:305!1.13e-14!106;DOID:162!9.56e-09!235;DOID:299!4.93e-08!25;DOID:14566!6.29e-08!239 | |ontology_enrichment_disease=DOID:0050687!5.38e-17!143;DOID:305!1.13e-14!106;DOID:162!9.56e-09!235;DOID:299!4.93e-08!25;DOID:14566!6.29e-08!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.38e-23!82;UBERON:0005743!1.42e-22!86;UBERON:0000073!2.02e-21!94;UBERON:0001016!2.02e-21!94;UBERON:0000955!6.82e-20!69;UBERON:0006238!6.82e-20!69;UBERON:0001049!1.05e-19!57;UBERON:0005068!1.05e-19!57;UBERON:0006241!1.05e-19!57;UBERON:0007135!1.05e-19!57;UBERON:0001869!1.53e-17!32;UBERON:0000924!3.11e-17!173;UBERON:0006601!3.11e-17!173;UBERON:0004121!5.12e-17!169;UBERON:0001893!7.65e-17!34;UBERON:0002020!1.15e-16!34;UBERON:0003528!1.15e-16!34;UBERON:0002619!1.26e-16!22;UBERON:0002791!3.88e-16!33;UBERON:0002616!8.91e-16!59;UBERON:0002780!1.77e-15!41;UBERON:0001890!1.77e-15!41;UBERON:0006240!1.77e-15!41;UBERON:0001950!3.31e-15!20;UBERON:0000033!4.93e-15!123;UBERON:0003080!9.33e-15!42;UBERON:0002346!1.62e-14!90;UBERON:0003075!1.93e-14!86;UBERON:0007284!1.93e-14!86;UBERON:0000956!3.07e-14!25;UBERON:0000203!3.07e-14!25;UBERON:0000153!4.54e-13!129;UBERON:0007811!4.54e-13!129;UBERON:0003056!4.04e-11!61;UBERON:0000064!6.17e-11!219;UBERON:0000475!1.07e-09!365;UBERON:0000481!1.34e-07!347;UBERON:0007023!1.63e-07!115;UBERON:0000922!5.40e-07!612;UBERON:0000062!9.91e-07!511 | |ontology_enrichment_uberon=UBERON:0001017!4.38e-23!82;UBERON:0005743!1.42e-22!86;UBERON:0000073!2.02e-21!94;UBERON:0001016!2.02e-21!94;UBERON:0000955!6.82e-20!69;UBERON:0006238!6.82e-20!69;UBERON:0001049!1.05e-19!57;UBERON:0005068!1.05e-19!57;UBERON:0006241!1.05e-19!57;UBERON:0007135!1.05e-19!57;UBERON:0001869!1.53e-17!32;UBERON:0000924!3.11e-17!173;UBERON:0006601!3.11e-17!173;UBERON:0004121!5.12e-17!169;UBERON:0001893!7.65e-17!34;UBERON:0002020!1.15e-16!34;UBERON:0003528!1.15e-16!34;UBERON:0002619!1.26e-16!22;UBERON:0002791!3.88e-16!33;UBERON:0002616!8.91e-16!59;UBERON:0002780!1.77e-15!41;UBERON:0001890!1.77e-15!41;UBERON:0006240!1.77e-15!41;UBERON:0001950!3.31e-15!20;UBERON:0000033!4.93e-15!123;UBERON:0003080!9.33e-15!42;UBERON:0002346!1.62e-14!90;UBERON:0003075!1.93e-14!86;UBERON:0007284!1.93e-14!86;UBERON:0000956!3.07e-14!25;UBERON:0000203!3.07e-14!25;UBERON:0000153!4.54e-13!129;UBERON:0007811!4.54e-13!129;UBERON:0003056!4.04e-11!61;UBERON:0000064!6.17e-11!219;UBERON:0000475!1.07e-09!365;UBERON:0000481!1.34e-07!347;UBERON:0007023!1.63e-07!115;UBERON:0000922!5.40e-07!612;UBERON:0000062!9.91e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.46e-31;22!UBERON:0001950;2.83e-28;20!UBERON:0000956;1.35e-26;25!UBERON:0000203;1.35e-26;25!UBERON:0001869;5.88e-25;32!UBERON:0002791;5.19e-23;32!UBERON:0001893;1.62e-22;34!UBERON:0003528;1.67e-22;34!UBERON:0002020;1.67e-22;34!UBERON:0002780;9.25e-16;41!UBERON:0001890;9.25e-16;41!UBERON:0000073;1.89e-14;53!UBERON:0002616;1.89e-14;53!UBERON:0000955;1.14e-12;68!UBERON:0001017;1.42e-10;75!UBERON:0000200;1.66e-10;6!UBERON:0001871;6.18e-09;6!UBERON:0000349;7.39e-09;5!UBERON:0001016;7.68e-09;83!UBERON:0002021;1.15e-08;5!UBERON:0001872;3.82e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0002619;4.46e-31;22!UBERON:0001950;2.83e-28;20!UBERON:0000956;1.35e-26;25!UBERON:0000203;1.35e-26;25!UBERON:0001869;5.88e-25;32!UBERON:0002791;5.19e-23;32!UBERON:0001893;1.62e-22;34!UBERON:0003528;1.67e-22;34!UBERON:0002020;1.67e-22;34!UBERON:0002780;9.25e-16;41!UBERON:0001890;9.25e-16;41!UBERON:0000073;1.89e-14;53!UBERON:0002616;1.89e-14;53!UBERON:0000955;1.14e-12;68!UBERON:0001017;1.42e-10;75!UBERON:0000200;1.66e-10;6!UBERON:0001871;6.18e-09;6!UBERON:0000349;7.39e-09;5!UBERON:0001016;7.68e-09;83!UBERON:0002021;1.15e-08;5!UBERON:0001872;3.82e-08;5 | ||
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| ||
|short_description=p1@B3GNT4 | |short_description=p1@B3GNT4 | ||
}} | }} |
Latest revision as of 23:47, 16 September 2015
Short description: | p1@B3GNT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_B3GNT4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000545141_5end |
EntrezGene: | B3GNT4 |
HGNC: | 15683 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 9.74e-17 | 42 |
respiratory epithelial cell | 4.55e-12 | 13 |
endodermal cell | 4.45e-10 | 58 |
general ecto-epithelial cell | 6.12e-09 | 14 |
epithelial cell | 1.40e-08 | 253 |
epithelial cell of tracheobronchial tree | 4.20e-07 | 9 |
epithelial cell of lower respiratory tract | 4.20e-07 | 9 |
stratified squamous epithelial cell | 8.16e-07 | 6 |
keratin accumulating cell | 8.16e-07 | 6 |
stratified epithelial cell | 8.16e-07 | 6 |
keratinizing barrier epithelial cell | 8.16e-07 | 6 |
epithelial fate stem cell | 8.16e-07 | 6 |
stratified epithelial stem cell | 8.16e-07 | 6 |
surface ectodermal cell | 8.16e-07 | 6 |