FFCP PHASE1:Hg19::chr10:13628921..13628928,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8559 | |EntrezGene=8559 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17351 | |HGNC=17351 | ||
|TSSclassifier=strong | |||
|UniProt=Q99633 | |UniProt=Q99633 | ||
|association_with_transcript=0bp_to_ENST00000378572_5end | |association_with_transcript=0bp_to_ENST00000378572_5end | ||
|cluster_id=chr10:13628921..13628928,+ | |||
|description=CAGE_peak_2_at_PRPF18_5end | |description=CAGE_peak_2_at_PRPF18_5end | ||
|id=chr10:13628921..13628928,+ | |id=chr10:13628921..13628928,+ | ||
|ontology_enrichment_celltype=CL:0000763!1.71e-07!112;CL:0000049!1.71e-07!112 | |ontology_enrichment_celltype=CL:0000763!1.71e-07!112;CL:0000049!1.71e-07!112 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.67e-09,108;CL:0000049,2.67e-09,108 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:8692!6.20e-07!31 | |ontology_enrichment_disease=DOID:8692!6.20e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.35e-07;31 | |ontology_enrichment_disease_v019=DOID:8692;2.35e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,6.71e-09,31;DOID:1240,1.36e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.98e-12!115;UBERON:0001049!1.00e-11!57;UBERON:0005068!1.00e-11!57;UBERON:0006241!1.00e-11!57;UBERON:0007135!1.00e-11!57;UBERON:0000073!8.65e-11!94;UBERON:0001016!8.65e-11!94;UBERON:0002780!2.68e-10!41;UBERON:0001890!2.68e-10!41;UBERON:0006240!2.68e-10!41;UBERON:0003080!2.87e-10!42;UBERON:0000955!3.78e-10!69;UBERON:0006238!3.78e-10!69;UBERON:0001017!4.11e-10!82;UBERON:0002346!8.13e-10!90;UBERON:0005743!1.59e-09!86;UBERON:0002616!1.73e-09!59;UBERON:0003075!7.44e-09!86;UBERON:0007284!7.44e-09!86;UBERON:0002020!1.90e-08!34;UBERON:0003528!1.90e-08!34;UBERON:0001893!3.84e-08!34;UBERON:0002791!5.64e-08!33;UBERON:0001869!2.58e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!6.98e-12!115;UBERON:0001049!1.00e-11!57;UBERON:0005068!1.00e-11!57;UBERON:0006241!1.00e-11!57;UBERON:0007135!1.00e-11!57;UBERON:0000073!8.65e-11!94;UBERON:0001016!8.65e-11!94;UBERON:0002780!2.68e-10!41;UBERON:0001890!2.68e-10!41;UBERON:0006240!2.68e-10!41;UBERON:0003080!2.87e-10!42;UBERON:0000955!3.78e-10!69;UBERON:0006238!3.78e-10!69;UBERON:0001017!4.11e-10!82;UBERON:0002346!8.13e-10!90;UBERON:0005743!1.59e-09!86;UBERON:0002616!1.73e-09!59;UBERON:0003075!7.44e-09!86;UBERON:0007284!7.44e-09!86;UBERON:0002020!1.90e-08!34;UBERON:0003528!1.90e-08!34;UBERON:0001893!3.84e-08!34;UBERON:0002791!5.64e-08!33;UBERON:0001869!2.58e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.78e-08;41!UBERON:0001890;2.78e-08;41!UBERON:0003528;3.66e-08;34!UBERON:0002020;3.66e-08;34!UBERON:0002791;9.42e-08;32!UBERON:0001893;1.18e-07;34!UBERON:0001869;1.43e-07;32!UBERON:0002619;5.65e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002780;2.78e-08;41!UBERON:0001890;2.78e-08;41!UBERON:0003528;3.66e-08;34!UBERON:0002020;3.66e-08;34!UBERON:0002791;9.42e-08;32!UBERON:0001893;1.18e-07;34!UBERON:0001869;1.43e-07;32!UBERON:0002619;5.65e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.38e-15,89;UBERON:0001049,1.74e-13,56;UBERON:0005068,1.74e-13,56;UBERON:0006241,1.74e-13,56;UBERON:0007135,1.74e-13,56;UBERON:0001017,7.42e-13,81;UBERON:0002780,1.07e-11,41;UBERON:0001890,1.07e-11,41;UBERON:0003080,1.07e-11,41;UBERON:0006240,1.07e-11,41;UBERON:0000073,1.27e-11,53;UBERON:0002616,1.27e-11,53;UBERON:0000955,3.45e-11,68;UBERON:0006238,3.45e-11,68;UBERON:0002346,8.62e-11,86;UBERON:0003075,3.37e-10,82;UBERON:0007284,3.37e-10,82;UBERON:0007023,5.54e-10,114;UBERON:0003528,7.16e-10,34;UBERON:0002020,7.16e-10,34;UBERON:0001893,1.90e-09,34;UBERON:0002791,1.50e-08,32;UBERON:0001869,3.06e-08,32;UBERON:0003056,7.97e-08,61;UBERON:0010314,1.62e-07,132;UBERON:0002619,1.67e-07,22;UBERON:0010371,5.50e-07,104 | |||
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| ||
|short_description=p2@PRPF18 | |short_description=p2@PRPF18 | ||
}} | }} |
Latest revision as of 06:31, 17 September 2015
Short description: | p2@PRPF18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRPF18_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000378572_5end |
EntrezGene: | PRPF18 |
HGNC: | 17351 |
UniProt: | Q99633 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.67e-09 | 108 |
common myeloid progenitor | 2.67e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.38e-15 | 89 |
neural tube | 1.74e-13 | 56 |
neural rod | 1.74e-13 | 56 |
future spinal cord | 1.74e-13 | 56 |
neural keel | 1.74e-13 | 56 |
central nervous system | 7.42e-13 | 81 |
regional part of forebrain | 1.07e-11 | 41 |
forebrain | 1.07e-11 | 41 |
anterior neural tube | 1.07e-11 | 41 |
future forebrain | 1.07e-11 | 41 |
regional part of nervous system | 1.27e-11 | 53 |
regional part of brain | 1.27e-11 | 53 |
brain | 3.45e-11 | 68 |
future brain | 3.45e-11 | 68 |
neurectoderm | 8.62e-11 | 86 |
neural plate | 3.37e-10 | 82 |
presumptive neural plate | 3.37e-10 | 82 |
adult organism | 5.54e-10 | 114 |
brain grey matter | 7.16e-10 | 34 |
gray matter | 7.16e-10 | 34 |
telencephalon | 1.90e-09 | 34 |
regional part of telencephalon | 1.50e-08 | 32 |
cerebral hemisphere | 3.06e-08 | 32 |
pre-chordal neural plate | 7.97e-08 | 61 |
structure with developmental contribution from neural crest | 1.62e-07 | 132 |
regional part of cerebral cortex | 1.67e-07 | 22 |
ecto-epithelium | 5.50e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.71e-09 | 31 |
leukemia | 1.36e-07 | 39 |