FFCP PHASE1:Hg19::chr2:127413798..127413819,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2995 | |EntrezGene=2995 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4704 | |HGNC=4704 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_ENST00000464053_5end | |association_with_transcript=33bp_to_ENST00000464053_5end | ||
|cluster_id=chr2:127413798..127413819,+ | |||
|coexpression_cluster_id=C357 | |coexpression_cluster_id=C357 | ||
|description=CAGE_peak_3_at_GYPC_5end | |description=CAGE_peak_3_at_GYPC_5end | ||
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|ontology_enrichment_celltype=CL:0000048!4.35e-16!430;CL:0000034!1.95e-15!444;CL:0000222!2.83e-15!119;CL:0000723!2.26e-14!436;CL:0000183!8.02e-13!59;CL:0000055!1.75e-12!180;CL:0000187!2.16e-10!54;CL:0000680!2.59e-10!57;CL:0000056!2.59e-10!57;CL:0000355!2.59e-10!57;CL:0002371!3.54e-10!591;CL:0000144!1.04e-09!625;CL:0000393!9.93e-09!60;CL:0000211!9.93e-09!60;CL:0000192!1.68e-08!42;CL:0000514!1.68e-08!42;CL:0002320!7.73e-08!365;CL:0002078!6.20e-07!44 | |ontology_enrichment_celltype=CL:0000048!4.35e-16!430;CL:0000034!1.95e-15!444;CL:0000222!2.83e-15!119;CL:0000723!2.26e-14!436;CL:0000183!8.02e-13!59;CL:0000055!1.75e-12!180;CL:0000187!2.16e-10!54;CL:0000680!2.59e-10!57;CL:0000056!2.59e-10!57;CL:0000355!2.59e-10!57;CL:0002371!3.54e-10!591;CL:0000144!1.04e-09!625;CL:0000393!9.93e-09!60;CL:0000211!9.93e-09!60;CL:0000192!1.68e-08!42;CL:0000514!1.68e-08!42;CL:0002320!7.73e-08!365;CL:0002078!6.20e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000134;4.03e-08;55!CL:0000723;4.38e-08;61!CL:0000048;1.35e-07;58!CL:0000187;5.00e-07;55!CL:0000034;5.34e-07;69!CL:0000192;7.44e-07;43!CL:0000115;9.24e-07;36 | |ontology_enrichment_celltype_v019=CL:0000134;4.03e-08;55!CL:0000723;4.38e-08;61!CL:0000048;1.35e-07;58!CL:0000187;5.00e-07;55!CL:0000034;5.34e-07;69!CL:0000192;7.44e-07;43!CL:0000115;9.24e-07;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.54e-16,121;CL:0000048,2.57e-12,427;CL:0000034,7.95e-12,441;CL:0000187,1.48e-11,55;CL:0000723,2.63e-11,433;CL:0000680,7.78e-11,58;CL:0000056,7.78e-11,58;CL:0000355,7.78e-11,58;CL:0000192,9.47e-10,43;CL:0000514,9.47e-10,43;CL:0000393,1.94e-09,61;CL:0000211,1.94e-09,61;CL:0002078,2.09e-08,45;CL:0000115,6.15e-08,36 | |||
|ontology_enrichment_development_v019=CL:0000514;7.44e-07;43 | |ontology_enrichment_development_v019=CL:0000514;7.44e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!5.49e-19!113;UBERON:0004535!4.45e-18!110;UBERON:0004290!4.03e-13!70;UBERON:0003081!7.84e-13!216;UBERON:0004872!9.72e-12!84;UBERON:0005256!1.18e-11!143;UBERON:0000914!1.77e-11!83;UBERON:0002329!1.77e-11!83;UBERON:0003077!1.77e-11!83;UBERON:0003059!1.77e-11!83;UBERON:0007282!1.77e-11!83;UBERON:0009618!1.77e-11!83;UBERON:0007285!1.77e-11!83;UBERON:0002049!2.12e-11!79;UBERON:0007798!2.12e-11!79;UBERON:0001134!2.32e-11!61;UBERON:0002036!2.32e-11!61;UBERON:0003082!2.32e-11!61;UBERON:0002385!4.03e-11!63;UBERON:0001015!4.03e-11!63;UBERON:0000383!4.03e-11!63;UBERON:0000055!1.26e-09!69;UBERON:0003914!2.21e-09!118;UBERON:0000486!2.45e-08!82;UBERON:0002384!2.03e-07!375;UBERON:0007100!2.19e-07!27;UBERON:0001473!8.46e-07!8;UBERON:0004536!8.46e-07!8;UBERON:0006558!8.46e-07!8 | |ontology_enrichment_uberon=UBERON:0001009!5.49e-19!113;UBERON:0004535!4.45e-18!110;UBERON:0004290!4.03e-13!70;UBERON:0003081!7.84e-13!216;UBERON:0004872!9.72e-12!84;UBERON:0005256!1.18e-11!143;UBERON:0000914!1.77e-11!83;UBERON:0002329!1.77e-11!83;UBERON:0003077!1.77e-11!83;UBERON:0003059!1.77e-11!83;UBERON:0007282!1.77e-11!83;UBERON:0009618!1.77e-11!83;UBERON:0007285!1.77e-11!83;UBERON:0002049!2.12e-11!79;UBERON:0007798!2.12e-11!79;UBERON:0001134!2.32e-11!61;UBERON:0002036!2.32e-11!61;UBERON:0003082!2.32e-11!61;UBERON:0002385!4.03e-11!63;UBERON:0001015!4.03e-11!63;UBERON:0000383!4.03e-11!63;UBERON:0000055!1.26e-09!69;UBERON:0003914!2.21e-09!118;UBERON:0000486!2.45e-08!82;UBERON:0002384!2.03e-07!375;UBERON:0007100!2.19e-07!27;UBERON:0001473!8.46e-07!8;UBERON:0004536!8.46e-07!8;UBERON:0006558!8.46e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.62e-08;25!UBERON:0001473;8.17e-08;8!UBERON:0004536;8.17e-08;8!UBERON:0006558;8.17e-08;8!UBERON:0002405;2.20e-07;27!UBERON:0000948;2.97e-07;22!UBERON:0002465;3.94e-07;10!UBERON:0002193;4.27e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0007100;3.62e-08;25!UBERON:0001473;8.17e-08;8!UBERON:0004536;8.17e-08;8!UBERON:0006558;8.17e-08;8!UBERON:0002405;2.20e-07;27!UBERON:0000948;2.97e-07;22!UBERON:0002465;3.94e-07;10!UBERON:0002193;4.27e-07;42 | ||
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| ||
|short_description=p3@GYPC | |short_description=p3@GYPC | ||
}} | }} |
Latest revision as of 19:39, 16 September 2015
Short description: | p3@GYPC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GYPC_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | 33bp_to_ENST00000464053_5end |
EntrezGene: | GYPC |
HGNC: | 4704 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.54e-16 | 121 |
multi fate stem cell | 2.57e-12 | 427 |
stem cell | 7.95e-12 | 441 |
muscle cell | 1.48e-11 | 55 |
somatic stem cell | 2.63e-11 | 433 |
muscle precursor cell | 7.78e-11 | 58 |
myoblast | 7.78e-11 | 58 |
multi-potent skeletal muscle stem cell | 7.78e-11 | 58 |
smooth muscle cell | 9.47e-10 | 43 |
smooth muscle myoblast | 9.47e-10 | 43 |
electrically responsive cell | 1.94e-09 | 61 |
electrically active cell | 1.94e-09 | 61 |
meso-epithelial cell | 2.09e-08 | 45 |
endothelial cell | 6.15e-08 | 36 |