FFCP PHASE1:Hg19::chr11:74660278..74660334,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9789 | |EntrezGene=9789 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28962 | |HGNC=28962 | ||
|TSSclassifier=strong | |||
|UniProt=Q15005,E9PRB9,E9PL01,E9PI68 | |UniProt=Q15005,E9PRB9,E9PL01,E9PI68 | ||
|association_with_transcript=0bp_to_ENST00000263672,ENST00000526361,ENST00000527225,ENST00000527290,ENST00000528265,ENST00000530257,ENST00000532972,NM_014752,uc001ovu.2_5end | |association_with_transcript=0bp_to_ENST00000263672,ENST00000526361,ENST00000527225,ENST00000527290,ENST00000528265,ENST00000530257,ENST00000532972,NM_014752,uc001ovu.2_5end | ||
|cluster_id=chr11:74660278..74660334,+ | |||
|coexpression_cluster_id=C248 | |coexpression_cluster_id=C248 | ||
|description=CAGE_peak_1_at_SPCS2_5end | |description=CAGE_peak_1_at_SPCS2_5end | ||
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|ontology_enrichment_celltype=CL:0000860!3.96e-16!45;CL:0002057!2.75e-15!42;CL:0000839!4.14e-14!70;CL:0002009!4.99e-13!65;CL:0000557!5.31e-13!71;CL:0002194!2.98e-12!63;CL:0000576!2.98e-12!63;CL:0000040!2.98e-12!63;CL:0000559!2.98e-12!63;CL:0002031!8.85e-12!124;CL:0000766!3.67e-11!76;CL:0000738!3.22e-10!140;CL:0000763!5.22e-09!112;CL:0000049!5.22e-09!112;CL:0002032!1.75e-08!165;CL:0000837!1.75e-08!165;CL:0002087!2.12e-08!119;CL:0000037!3.03e-08!172;CL:0000566!3.03e-08!172 | |ontology_enrichment_celltype=CL:0000860!3.96e-16!45;CL:0002057!2.75e-15!42;CL:0000839!4.14e-14!70;CL:0002009!4.99e-13!65;CL:0000557!5.31e-13!71;CL:0002194!2.98e-12!63;CL:0000576!2.98e-12!63;CL:0000040!2.98e-12!63;CL:0000559!2.98e-12!63;CL:0002031!8.85e-12!124;CL:0000766!3.67e-11!76;CL:0000738!3.22e-10!140;CL:0000763!5.22e-09!112;CL:0000049!5.22e-09!112;CL:0002032!1.75e-08!165;CL:0000837!1.75e-08!165;CL:0002087!2.12e-08!119;CL:0000037!3.03e-08!172;CL:0000566!3.03e-08!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.18e-14;33!CL:0002057;3.18e-14;33!CL:0000473;1.06e-12;39!CL:0000234;1.06e-12;39!CL:0000576;1.09e-08;48 | |ontology_enrichment_celltype_v019=CL:0000860;3.18e-14;33!CL:0002057;3.18e-14;33!CL:0000473;1.06e-12;39!CL:0000234;1.06e-12;39!CL:0000576;1.09e-08;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.38e-16,48;CL:0000234,3.38e-16,48;CL:0000860,2.52e-15,42;CL:0002057,2.52e-15,42;CL:0000839,5.86e-14,66;CL:0002009,6.07e-13,61;CL:0000557,7.22e-13,67;CL:0002194,3.71e-12,59;CL:0000576,3.71e-12,59;CL:0000040,3.71e-12,59;CL:0000559,3.71e-12,59;CL:0002031,1.74e-11,120;CL:0000766,5.13e-11,72;CL:0000738,5.55e-10,136;CL:0000763,8.54e-09,108;CL:0000049,8.54e-09,108;CL:0002032,3.01e-08,161;CL:0000837,3.01e-08,161;CL:0002087,3.69e-08,115;CL:0000037,5.16e-08,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.57e-11;42 | |ontology_enrichment_development_v019=CL:0002057;1.57e-11;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.17e-12!80;UBERON:0001474!1.70e-09!86;UBERON:0001049!2.74e-09!57;UBERON:0005068!2.74e-09!57;UBERON:0006241!2.74e-09!57;UBERON:0007135!2.74e-09!57;UBERON:0004765!8.73e-09!101;UBERON:0001434!8.73e-09!101;UBERON:0002780!4.68e-08!41;UBERON:0001890!4.68e-08!41;UBERON:0006240!4.68e-08!41;UBERON:0003080!5.81e-08!42;UBERON:0002405!7.07e-08!115;UBERON:0002616!1.35e-07!59;UBERON:0001017!1.77e-07!82;UBERON:0007023!3.11e-07!115 | |ontology_enrichment_uberon=UBERON:0002371!8.17e-12!80;UBERON:0001474!1.70e-09!86;UBERON:0001049!2.74e-09!57;UBERON:0005068!2.74e-09!57;UBERON:0006241!2.74e-09!57;UBERON:0007135!2.74e-09!57;UBERON:0004765!8.73e-09!101;UBERON:0001434!8.73e-09!101;UBERON:0002780!4.68e-08!41;UBERON:0001890!4.68e-08!41;UBERON:0006240!4.68e-08!41;UBERON:0003080!5.81e-08!42;UBERON:0002405!7.07e-08!115;UBERON:0002616!1.35e-07!59;UBERON:0001017!1.77e-07!82;UBERON:0007023!3.11e-07!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.26e-11,76;UBERON:0001049,2.26e-09,56;UBERON:0005068,2.26e-09,56;UBERON:0006241,2.26e-09,56;UBERON:0007135,2.26e-09,56;UBERON:0001474,2.64e-09,82;UBERON:0004765,5.28e-09,90;UBERON:0002405,1.02e-08,93;UBERON:0000073,1.08e-08,53;UBERON:0002616,1.08e-08,53;UBERON:0002780,4.63e-08,41;UBERON:0001890,4.63e-08,41;UBERON:0003080,4.63e-08,41;UBERON:0006240,4.63e-08,41;UBERON:0001434,8.71e-08,100;UBERON:0001016,1.39e-07,89;UBERON:0001017,1.53e-07,81;UBERON:0007023,3.81e-07,114 | |||
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| ||
|short_description=p1@SPCS2 | |short_description=p1@SPCS2 | ||
}} | }} |
Latest revision as of 05:14, 20 September 2015
Short description: | p1@SPCS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPCS2_5end |
Coexpression cluster: | C248_iPS_Aortic_Hep2_amygdala_acute_medial_Myoblast |
Association with transcript: | 0bp_to_ENST00000263672, ENST00000526361, ENST00000527225, ENST00000527290, ENST00000528265, ENST00000530257, ENST00000532972, NM_014752, uc001ovu.2_5end |
EntrezGene: | SPCS2 |
HGNC: | 28962 |
UniProt: | Q15005E9PRB9E9PL01E9PI68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.38e-16 | 48 |
phagocyte | 3.38e-16 | 48 |
classical monocyte | 2.52e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.52e-15 | 42 |
myeloid lineage restricted progenitor cell | 5.86e-14 | 66 |
macrophage dendritic cell progenitor | 6.07e-13 | 61 |
granulocyte monocyte progenitor cell | 7.22e-13 | 67 |
monopoietic cell | 3.71e-12 | 59 |
monocyte | 3.71e-12 | 59 |
monoblast | 3.71e-12 | 59 |
promonocyte | 3.71e-12 | 59 |
hematopoietic lineage restricted progenitor cell | 1.74e-11 | 120 |
myeloid leukocyte | 5.13e-11 | 72 |
leukocyte | 5.55e-10 | 136 |
myeloid cell | 8.54e-09 | 108 |
common myeloid progenitor | 8.54e-09 | 108 |
hematopoietic oligopotent progenitor cell | 3.01e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.01e-08 | 161 |
nongranular leukocyte | 3.69e-08 | 115 |
hematopoietic stem cell | 5.16e-08 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.26e-11 | 76 |
neural tube | 2.26e-09 | 56 |
neural rod | 2.26e-09 | 56 |
future spinal cord | 2.26e-09 | 56 |
neural keel | 2.26e-09 | 56 |
bone element | 2.64e-09 | 82 |
skeletal element | 5.28e-09 | 90 |
immune system | 1.02e-08 | 93 |
regional part of nervous system | 1.08e-08 | 53 |
regional part of brain | 1.08e-08 | 53 |
regional part of forebrain | 4.63e-08 | 41 |
forebrain | 4.63e-08 | 41 |
anterior neural tube | 4.63e-08 | 41 |
future forebrain | 4.63e-08 | 41 |
skeletal system | 8.71e-08 | 100 |
nervous system | 1.39e-07 | 89 |
central nervous system | 1.53e-07 | 81 |
adult organism | 3.81e-07 | 114 |