FFCP PHASE1:Hg19::chr7:158937551..158937569,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7434 | |EntrezGene=7434 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12695 | |HGNC=12695 | ||
|TSSclassifier=strong | |||
|UniProt=C9JCP7 | |UniProt=C9JCP7 | ||
|association_with_transcript=0bp_to_ENST00000402066_5end | |association_with_transcript=0bp_to_ENST00000402066_5end | ||
|cluster_id=chr7:158937551..158937569,- | |||
|coexpression_cluster_id=C2887 | |coexpression_cluster_id=C2887 | ||
|description=CAGE_peak_1_at_VIPR2_5end | |description=CAGE_peak_1_at_VIPR2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000784;7.80e-07;3 | |ontology_enrichment_celltype_v019=CL:0000784;7.80e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000784,7.92e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.57e-07;82 | |ontology_enrichment_development_v019=UBERON:0006601;8.57e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.83e-64!115;UBERON:0001049!1.03e-27!57;UBERON:0005068!1.03e-27!57;UBERON:0006241!1.03e-27!57;UBERON:0007135!1.03e-27!57;UBERON:0001017!1.31e-23!82;UBERON:0003080!3.49e-23!42;UBERON:0002616!6.51e-23!59;UBERON:0005743!7.33e-23!86;UBERON:0002780!1.19e-22!41;UBERON:0001890!1.19e-22!41;UBERON:0006240!1.19e-22!41;UBERON:0000073!1.25e-22!94;UBERON:0001016!1.25e-22!94;UBERON:0003075!1.85e-21!86;UBERON:0007284!1.85e-21!86;UBERON:0000955!4.77e-20!69;UBERON:0006238!4.77e-20!69;UBERON:0002346!1.13e-19!90;UBERON:0001893!1.16e-19!34;UBERON:0002020!1.81e-19!34;UBERON:0003528!1.81e-19!34;UBERON:0002791!7.54e-19!33;UBERON:0001869!2.33e-18!32;UBERON:0001950!1.29e-17!20;UBERON:0002619!2.98e-17!22;UBERON:0000956!1.39e-15!25;UBERON:0000203!1.39e-15!25;UBERON:0003056!5.79e-15!61;UBERON:0000153!3.13e-11!129;UBERON:0007811!3.13e-11!129;UBERON:0004121!1.49e-10!169;UBERON:0001737!3.34e-10!9;UBERON:0000924!7.18e-10!173;UBERON:0006601!7.18e-10!173;UBERON:0000033!1.01e-09!123;UBERON:0001557!3.03e-09!19;UBERON:0000064!8.17e-08!219;UBERON:0001871!1.31e-07!7;UBERON:0002298!8.47e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!3.83e-64!115;UBERON:0001049!1.03e-27!57;UBERON:0005068!1.03e-27!57;UBERON:0006241!1.03e-27!57;UBERON:0007135!1.03e-27!57;UBERON:0001017!1.31e-23!82;UBERON:0003080!3.49e-23!42;UBERON:0002616!6.51e-23!59;UBERON:0005743!7.33e-23!86;UBERON:0002780!1.19e-22!41;UBERON:0001890!1.19e-22!41;UBERON:0006240!1.19e-22!41;UBERON:0000073!1.25e-22!94;UBERON:0001016!1.25e-22!94;UBERON:0003075!1.85e-21!86;UBERON:0007284!1.85e-21!86;UBERON:0000955!4.77e-20!69;UBERON:0006238!4.77e-20!69;UBERON:0002346!1.13e-19!90;UBERON:0001893!1.16e-19!34;UBERON:0002020!1.81e-19!34;UBERON:0003528!1.81e-19!34;UBERON:0002791!7.54e-19!33;UBERON:0001869!2.33e-18!32;UBERON:0001950!1.29e-17!20;UBERON:0002619!2.98e-17!22;UBERON:0000956!1.39e-15!25;UBERON:0000203!1.39e-15!25;UBERON:0003056!5.79e-15!61;UBERON:0000153!3.13e-11!129;UBERON:0007811!3.13e-11!129;UBERON:0004121!1.49e-10!169;UBERON:0001737!3.34e-10!9;UBERON:0000924!7.18e-10!173;UBERON:0006601!7.18e-10!173;UBERON:0000033!1.01e-09!123;UBERON:0001557!3.03e-09!19;UBERON:0000064!8.17e-08!219;UBERON:0001871!1.31e-07!7;UBERON:0002298!8.47e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.57e-21;20!UBERON:0002619;2.57e-21;22!UBERON:0000956;3.56e-18;25!UBERON:0000203;3.56e-18;25!UBERON:0001869;1.59e-14;32!UBERON:0001737;1.72e-14;9!UBERON:0001557;1.72e-14;9!UBERON:0002791;2.10e-14;32!UBERON:0001893;2.45e-14;34!UBERON:0003528;1.11e-13;34!UBERON:0002020;1.11e-13;34!UBERON:0007023;1.46e-13;114!UBERON:0002780;2.02e-13;41!UBERON:0001890;2.02e-13;41!UBERON:0000073;3.73e-12;53!UBERON:0002616;3.73e-12;53!UBERON:0001871;1.41e-09;6!UBERON:0000200;1.28e-08;6!UBERON:0000955;7.47e-08;68!UBERON:0000922;9.10e-08;49!UBERON:0001017;1.61e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0001950;2.57e-21;20!UBERON:0002619;2.57e-21;22!UBERON:0000956;3.56e-18;25!UBERON:0000203;3.56e-18;25!UBERON:0001869;1.59e-14;32!UBERON:0001737;1.72e-14;9!UBERON:0001557;1.72e-14;9!UBERON:0002791;2.10e-14;32!UBERON:0001893;2.45e-14;34!UBERON:0003528;1.11e-13;34!UBERON:0002020;1.11e-13;34!UBERON:0007023;1.46e-13;114!UBERON:0002780;2.02e-13;41!UBERON:0001890;2.02e-13;41!UBERON:0000073;3.73e-12;53!UBERON:0002616;3.73e-12;53!UBERON:0001871;1.41e-09;6!UBERON:0000200;1.28e-08;6!UBERON:0000955;7.47e-08;68!UBERON:0000922;9.10e-08;49!UBERON:0001017;1.61e-07;75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.46e-52,114;UBERON:0001049,5.45e-22,56;UBERON:0005068,5.45e-22,56;UBERON:0006241,5.45e-22,56;UBERON:0007135,5.45e-22,56;UBERON:0001950,1.40e-21,20;UBERON:0002619,1.65e-21,22;UBERON:0000073,2.22e-20,53;UBERON:0002616,2.22e-20,53;UBERON:0003075,1.37e-18,82;UBERON:0007284,1.37e-18,82;UBERON:0002780,2.17e-18,41;UBERON:0001890,2.17e-18,41;UBERON:0003080,2.17e-18,41;UBERON:0006240,2.17e-18,41;UBERON:0000956,2.42e-18,25;UBERON:0000203,2.42e-18,25;UBERON:0002346,3.37e-17,86;UBERON:0001893,1.16e-16,34;UBERON:0003528,1.82e-16,34;UBERON:0002020,1.82e-16,34;UBERON:0001869,2.20e-16,32;UBERON:0002791,2.85e-16,32;UBERON:0000955,1.08e-15,68;UBERON:0006238,1.08e-15,68;UBERON:0001017,8.41e-15,81;UBERON:0001737,1.36e-14,9;UBERON:0011216,2.52e-14,223;UBERON:0001016,3.17e-14,89;UBERON:0010371,3.41e-13,104;UBERON:0003056,3.78e-13,61;UBERON:0001557,1.30e-12,19;UBERON:0010314,1.80e-12,132;UBERON:0001871,1.69e-09,6;UBERON:0000200,1.61e-08,6 | |||
|phase1_expression=0,2.5692062866918,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0.786728553697808,0,1.23852898652861,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0.657751618414705,0.552700035571697,0.289803085735052,0,0,0,0,0,0.34362744548263,0,0,0.651083453856419,0,0.301150238155546,0.511946444617674,0,0,0,0.403213486449465,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,2.03017567021455,0,0,0,0,0,22.1796280603968,18.3038371449641,28.6022276023765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0.530119073285941,2.20768491452085,0.518305275076852,1.26160425437814,4.74470566798579,0,0,0,0,0,4.49565840151407,2.52877035117153,5.06123162755312,2.86764329104224,6.31850387867978,4.27087114399974,3.50561401216427,5.101758093259,3.8474715694639,0,0,0.4115740113314,0,0,0,0,11.0365774853663,0,0,0,0,0,0,0,0,0,1.39116485970092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,1.50719688529793,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,1.18218456121156,2.15627574859517,1.54011643535698,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.431428401637234,1.17400313583789,0,0,0,0,1.38115775959256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0.569647187174163,0.714695326373367,0.822724546172388,0,0,0,0,0,0,0,6.49211458394002,22.8365317148409,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,1.9882952955326,1.54736358051564,0,0,0,9.16540745954921,2.21027132424918,0,0,0,0,0,0,0,2.66337195219721,0,0,1.93866549219044,1.02044907978036,0,0,0,0.724999575434793,0,0,1.18193840883968,0,0,0,0,0.844175070377856,0,1.21637185924347,1.47773809476774,1.31631238292384,0.32681539055697,0,11.388638258562,0,0,0,0,0,0.915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97157158647103,5.04208117669033,8.55442202907076,0,0,0,0.943615861729479,2.40773294189637,1.1713222286267,0,0,0,10.6537788769335,4.83962864194656,1.22429104652196,0.31593289814244,0.150323419414493,0,0.664653872707185,0,0,0,0,0,0,0,0,2.79562669187248,0,1.54810130062536,1.16942907337897,1.39596276990456,2.03676934625681,0,6.10148000107438,0,0,1.58276989889697,0,0,2.56143593687223,0,0,0,6.00582492516876,0,0,0.707082103850386,0,0,0.815985741090574,0,0.600420288709789,0.958337652243951,0,0,0,2.51354161145029,5.95817102430378,2.87149209830726,4.99197501247478,14.5936856366434,4.68660060627932,14.7803639470798,0,0,0,0,0,0,0,0,2.04305109167363,0.321506296930038,0.412618309791701,0.415440338029185,0,0,1.82248669974074,0,0.157611414598396,5.97982304738978,0,0,0,2.1440859791201,5.95882773328889,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0.904980694530854,1.19009341568421,0,0,0.533937062838473,0.157204305099666,0.828478110694391,1.48849806543585,0,0,0,0,0,0,0,0,1.77213635993397,1.09823638411767,2.1282458220105,1.72022758707021,1.99672292766334,2.48385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.1647143800278,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07387654227596,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,2.47997066212368,0,0,0,0,0,0.558644917973244,0,1.1829261750188,0,0,0,1.22035527683273,1.41696576325585,3.83121261737163,3.07674546361133,0.504143392443436,6.70825348902913,1.45328081068666,1.42769420259154,0,0,0,0,0,0,0,6.16724692463909,0,2.34454203369928,0,0,0,2.43135304626221,0.781078098613847,2.68692835451539,2.21955335678674,2.7348740450911,0,4.46590060550365,0,0,1.07140367175657,2.35398605553177,0.606965604236632,0.91064876540519,2.7497734750418,0,0,0.815636795721981,2.49936539538827,0,0,3.61068227112365,0.942693539496011,0,6.39211104356647,0,0,3.50235066465616,0,0,0.173858272302579,0,0,0,0,0.430227358820278,0,0,16.5120949574462,0.4582137370881,0,0,0.447421727191169,0,0,1.94228651156368,1.23195368227496,6.95888658802919,1.94284397223656,0,0,0,0,0,0,2.00652811080656,2.18559560503957,0,4.6578181133242,0,1.76677620403451,0.891139200981258,17.3288848309194,0,0,0.386747327841463,0,0,0,0,8.76403665895821,0.917458566809082,1.72007499781742,0,2.03974470572744,1.30905207102113,3.1741610430924,0,0.462175628631418,0,0,0.764859003745869,0,0.101988829741982,0,0.551369397209069,0,1.97024615367422,0.535928260312357,0,1.75836092965222,1.0661699095049,4.047095334883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| ||
|short_description=p1@VIPR2 | |short_description=p1@VIPR2 | ||
}} | }} |
Latest revision as of 12:38, 17 September 2015
Short description: | p1@VIPR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VIPR2_5end |
Coexpression cluster: | C2887_mesodermal_Dendritic_acute_thymus_spinal_heart_seminal |
Association with transcript: | 0bp_to_ENST00000402066_5end |
EntrezGene: | VIPR2 |
HGNC: | 12695 |
UniProt: | C9JCP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 7.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.46e-52 | 114 |
neural tube | 5.45e-22 | 56 |
neural rod | 5.45e-22 | 56 |
future spinal cord | 5.45e-22 | 56 |
neural keel | 5.45e-22 | 56 |
neocortex | 1.40e-21 | 20 |
regional part of cerebral cortex | 1.65e-21 | 22 |
regional part of nervous system | 2.22e-20 | 53 |
regional part of brain | 2.22e-20 | 53 |
neural plate | 1.37e-18 | 82 |
presumptive neural plate | 1.37e-18 | 82 |
regional part of forebrain | 2.17e-18 | 41 |
forebrain | 2.17e-18 | 41 |
anterior neural tube | 2.17e-18 | 41 |
future forebrain | 2.17e-18 | 41 |
cerebral cortex | 2.42e-18 | 25 |
pallium | 2.42e-18 | 25 |
neurectoderm | 3.37e-17 | 86 |
telencephalon | 1.16e-16 | 34 |
brain grey matter | 1.82e-16 | 34 |
gray matter | 1.82e-16 | 34 |
cerebral hemisphere | 2.20e-16 | 32 |
regional part of telencephalon | 2.85e-16 | 32 |
brain | 1.08e-15 | 68 |
future brain | 1.08e-15 | 68 |
central nervous system | 8.41e-15 | 81 |
larynx | 1.36e-14 | 9 |
organ system subdivision | 2.52e-14 | 223 |
nervous system | 3.17e-14 | 89 |
ecto-epithelium | 3.41e-13 | 104 |
pre-chordal neural plate | 3.78e-13 | 61 |
upper respiratory tract | 1.30e-12 | 19 |
structure with developmental contribution from neural crest | 1.80e-12 | 132 |
temporal lobe | 1.69e-09 | 6 |
gyrus | 1.61e-08 | 6 |