FFCP PHASE1:Hg19::chr11:114146042..114146050,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:114146042..114146050,- | |||
|coexpression_cluster_id=C372 | |coexpression_cluster_id=C372 | ||
|description=CAGE_peak_at_chr11:114146042..114146050,- | |description=CAGE_peak_at_chr11:114146042..114146050,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.87e-53;3!UBERON:0003057;2.87e-53;3!UBERON:0006601;5.88e-08;82 | |ontology_enrichment_development_v019=UBERON:0006241;2.87e-53;3!UBERON:0003057;2.87e-53;3!UBERON:0006601;5.88e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr11:114146042..114146050,- | |short_description=p@chr11:114146042..114146050,- | ||
}} | }} |
Latest revision as of 18:22, 23 July 2015
Short description: | p@chr11:114146042..114146050, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:114146042..114146050, - |
Coexpression cluster: | C372_spinal_medulla_substantia_locus_thalamus_corpus_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 5.20e-118 | 3 |
myelencephalon | 5.20e-118 | 3 |
future myelencephalon | 5.20e-118 | 3 |
posterior neural tube | 7.04e-66 | 15 |
chordal neural plate | 7.04e-66 | 15 |
brainstem | 1.22e-59 | 6 |
spinal cord | 3.75e-53 | 3 |
dorsal region element | 3.75e-53 | 3 |
dorsum | 3.75e-53 | 3 |
segmental subdivision of hindbrain | 2.22e-30 | 12 |
hindbrain | 2.22e-30 | 12 |
presumptive hindbrain | 2.22e-30 | 12 |
segmental subdivision of nervous system | 4.00e-28 | 13 |
neural tube | 5.63e-18 | 56 |
neural rod | 5.63e-18 | 56 |
future spinal cord | 5.63e-18 | 56 |
neural keel | 5.63e-18 | 56 |
central nervous system | 1.45e-12 | 81 |
neural plate | 1.45e-12 | 82 |
presumptive neural plate | 1.45e-12 | 82 |
neurectoderm | 5.13e-12 | 86 |
nervous system | 2.13e-11 | 89 |
ecto-epithelium | 4.61e-10 | 104 |
adult organism | 2.58e-09 | 114 |
structure with developmental contribution from neural crest | 4.60e-08 | 132 |
regional part of nervous system | 2.08e-07 | 53 |
regional part of brain | 2.08e-07 | 53 |