FFCP PHASE1:Hg19::chr20:33759817..33759829,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:33759817..33759829,+
|short_description=p3@PROCR
|description=CAGE_peak_3_at_PROCR_5end
|association_with_transcript=43bp_to_ENST00000216968,NM_006404,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10544 | |EntrezGene=10544 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9452 | |HGNC=9452 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UNN8 | |UniProt=Q9UNN8 | ||
|association_with_transcript=43bp_to_ENST00000216968,NM_006404,uc002xbt.2_5end | |||
|cluster_id=chr20:33759817..33759829,+ | |||
|description=CAGE_peak_3_at_PROCR_5end | |||
|id=chr20:33759817..33759829,+ | |||
|ontology_enrichment_celltype=CL:0000115!2.99e-18!35;CL:0002139!5.70e-18!24;CL:0002078!1.23e-16!44;CL:0000071!1.69e-14!18;CL:0002546!1.69e-14!18;CL:0000213!1.07e-12!57;CL:0000215!1.07e-12!57;CL:0000222!1.94e-12!119;CL:1000413!3.28e-08!9;CL:0000220!1.62e-07!246;CL:0002321!2.26e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.00e-31;24!CL:0000115;3.58e-27;36!CL:0000071;4.79e-25;18!CL:0002078;1.44e-20;45!CL:0000213;6.36e-16;58!CL:0000215;6.36e-16;58!CL:1000413;1.26e-13;9!CL:0002544;1.44e-09;6!CL:0002543;1.69e-09;6!CL:1000746;2.97e-09;7!CL:1000612;2.97e-09;7!CL:0002138;5.83e-08;6!CL:0002681;2.67e-07;12!CL:0002584;2.67e-07;12!CL:0002188;2.75e-07;5!CL:1000497;7.00e-07;17!CL:0002518;7.00e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.39e-32,36;CL:0002078,5.76e-32,45;CL:0002139,2.56e-31,24;CL:0000213,9.02e-26,58;CL:0000215,9.02e-26,58;CL:0000071,5.31e-25,18;CL:0002546,5.31e-25,18;CL:0000222,1.03e-14,121;CL:1000413,1.33e-13,9;CL:0000076,1.18e-10,63;CL:0002544,1.50e-09,6;CL:0002543,1.74e-09,6;CL:1000746,3.46e-09,7;CL:1000612,3.46e-09,7;CL:0005020,6.68e-08,6;CL:0002138,6.68e-08,6;CL:0005022,6.68e-08,6;CL:0002188,3.04e-07,5;CL:0002681,3.42e-07,12;CL:0002584,3.42e-07,12;CL:1000497,7.97e-07,17;CL:0002518,7.97e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;4.79e-25;18!CL:0005022;5.83e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!2.93e-21!69;UBERON:0002049!9.42e-20!79;UBERON:0007798!9.42e-20!79;UBERON:0001981!9.24e-18!60;UBERON:0007500!9.24e-18!60;UBERON:0004537!9.24e-18!60;UBERON:0006965!9.24e-18!60;UBERON:0004872!4.26e-16!84;UBERON:0003914!1.03e-15!118;UBERON:0001986!1.69e-14!18;UBERON:0004638!1.69e-14!18;UBERON:0004852!1.69e-14!18;UBERON:0001009!2.73e-14!113;UBERON:0000487!1.02e-13!22;UBERON:0004535!1.06e-13!110;UBERON:0006914!1.24e-13!25;UBERON:0000468!5.03e-11!659;UBERON:0000467!1.25e-10!625;UBERON:0000480!1.89e-10!626;UBERON:0001637!4.61e-10!42;UBERON:0003509!4.61e-10!42;UBERON:0004572!4.61e-10!42;UBERON:0002100!1.24e-09!216;UBERON:0003886!3.21e-09!63;UBERON:0000926!3.63e-09!448;UBERON:0004120!3.63e-09!448;UBERON:0006603!3.63e-09!448;UBERON:0003103!6.76e-09!69;UBERON:0004111!8.66e-09!241;UBERON:0000922!1.70e-08!612;UBERON:0003915!3.28e-08!9;UBERON:0004700!3.28e-08!9;UBERON:0001917!3.28e-08!9;UBERON:0000464!4.16e-08!104;UBERON:0000483!7.92e-08!309;UBERON:0000119!9.08e-08!312;UBERON:0000477!9.45e-08!286;UBERON:0002050!1.08e-07!605;UBERON:0005423!1.08e-07!605;UBERON:0000490!1.35e-07!138;UBERON:0000923!1.35e-07!604;UBERON:0005291!1.35e-07!604;UBERON:0006598!1.35e-07!604;UBERON:0002532!1.35e-07!604;UBERON:0009569!1.40e-07!113;UBERON:0004573!1.54e-07!33;UBERON:0004571!1.54e-07!33;UBERON:0000025!1.80e-07!194;UBERON:0000947!2.48e-07!21;UBERON:0010191!2.48e-07!21;UBERON:0002553!3.52e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.79e-25;18!UBERON:0001986;4.79e-25;18!UBERON:0004852;4.79e-25;18!UBERON:0006914;4.70e-22;25!UBERON:0000487;1.63e-21;22!UBERON:0000490;1.24e-16;33!UBERON:0000055;9.54e-15;65!UBERON:0003915;1.26e-13;9!UBERON:0004700;1.26e-13;9!UBERON:0001917;1.26e-13;9!UBERON:0007500;2.10e-11;56!UBERON:0001981;2.10e-11;56!UBERON:0004537;2.10e-11;56!UBERON:0003914;3.76e-11;74!UBERON:0001473;1.66e-09;8!UBERON:0004536;1.66e-09;8!UBERON:0006558;1.66e-09;8!UBERON:0002049;2.79e-09;75!UBERON:0007798;2.79e-09;75!UBERON:0000074;2.97e-09;7!UBERON:0001229;2.97e-09;7!UBERON:0001637;3.23e-09;42!UBERON:0003509;3.23e-09;42!UBERON:0004572;3.23e-09;42!UBERON:0000025;3.38e-09;93!UBERON:0002465;6.70e-09;10!UBERON:0000353;1.24e-08;15!UBERON:0004573;1.73e-08;33!UBERON:0004571;1.73e-08;33!UBERON:0000947;5.89e-08;21!UBERON:0010191;5.89e-08;21!UBERON:0001638;8.79e-08;9!UBERON:0003920;8.79e-08;9!UBERON:0004582;8.79e-08;9!UBERON:0001225;2.67e-07;12!UBERON:0008987;2.67e-07;12!UBERON:0002113;3.27e-07;24!UBERON:0011143;3.27e-07;24 | |||
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| ||
|short_description=p3@PROCR | |||
}} | }} |
Latest revision as of 19:21, 15 September 2015
Short description: | p3@PROCR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PROCR_5end |
Coexpression cluster: | NA |
Association with transcript: | 43bp_to_ENST00000216968, NM_006404, uc002xbt.2_5end |
EntrezGene: | PROCR |
HGNC: | 9452 |
UniProt: | Q9UNN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.39e-32 | 36 |
meso-epithelial cell | 5.76e-32 | 45 |
endothelial cell of vascular tree | 2.56e-31 | 24 |
lining cell | 9.02e-26 | 58 |
barrier cell | 9.02e-26 | 58 |
blood vessel endothelial cell | 5.31e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.31e-25 | 18 |
mesodermal cell | 1.03e-14 | 121 |
endothelial cell of artery | 1.33e-13 | 9 |
squamous epithelial cell | 1.18e-10 | 63 |
aortic endothelial cell | 1.50e-09 | 6 |
vein endothelial cell | 1.74e-09 | 6 |
glomerular cell | 3.46e-09 | 7 |
kidney corpuscule cell | 3.46e-09 | 7 |
lymphangioblast | 6.68e-08 | 6 |
endothelial cell of lymphatic vessel | 6.68e-08 | 6 |
vascular lymphangioblast | 6.68e-08 | 6 |
glomerular endothelial cell | 3.04e-07 | 5 |
kidney cortical cell | 3.42e-07 | 12 |
renal cortical epithelial cell | 3.42e-07 | 12 |
kidney cell | 7.97e-07 | 17 |
kidney epithelial cell | 7.97e-07 | 17 |