FFCP PHASE1:Hg19::chr10:17271510..17271558,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=424bp_to_uc001iot.1_5end | |association_with_transcript=424bp_to_uc001iot.1_5end | ||
|cluster_id=chr10:17271510..17271558,- | |||
|coexpression_cluster_id=C490 | |coexpression_cluster_id=C490 | ||
|description=CAGE_peak_2_at_uc001iot.1_5end | |description=CAGE_peak_2_at_uc001iot.1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!2.76e-33!180;CL:0002371!2.19e-26!591;CL:0000144!4.63e-22!625;CL:0000057!7.23e-20!75;CL:0000048!7.03e-19!430;CL:0000723!1.21e-17!436;CL:0000222!6.11e-17!119;CL:0000034!3.70e-16!444;CL:0000548!1.27e-12!679;CL:0000004!1.27e-12!679;CL:0000255!1.27e-12!679;CL:0000012!3.52e-12!682;CL:0000680!7.98e-12!57;CL:0000056!7.98e-12!57;CL:0000355!7.98e-12!57;CL:0000187!3.21e-11!54;CL:0000183!3.29e-11!59;CL:0000192!4.82e-10!42;CL:0000514!4.82e-10!42;CL:0002320!8.26e-10!365;CL:0000393!1.96e-09!60;CL:0000211!1.96e-09!60;CL:0000359!3.29e-09!32;CL:0000219!4.82e-09!390;CL:0002620!9.94e-09!23;CL:0000134!1.46e-08!358;CL:0002139!1.49e-08!24;CL:0000115!4.15e-08!35;CL:0000071!9.84e-08!18;CL:0002546!9.84e-08!18;CL:0002078!1.25e-07!44;CL:0000003!5.93e-07!722 | |ontology_enrichment_celltype=CL:0000055!2.76e-33!180;CL:0002371!2.19e-26!591;CL:0000144!4.63e-22!625;CL:0000057!7.23e-20!75;CL:0000048!7.03e-19!430;CL:0000723!1.21e-17!436;CL:0000222!6.11e-17!119;CL:0000034!3.70e-16!444;CL:0000548!1.27e-12!679;CL:0000004!1.27e-12!679;CL:0000255!1.27e-12!679;CL:0000012!3.52e-12!682;CL:0000680!7.98e-12!57;CL:0000056!7.98e-12!57;CL:0000355!7.98e-12!57;CL:0000187!3.21e-11!54;CL:0000183!3.29e-11!59;CL:0000192!4.82e-10!42;CL:0000514!4.82e-10!42;CL:0002320!8.26e-10!365;CL:0000393!1.96e-09!60;CL:0000211!1.96e-09!60;CL:0000359!3.29e-09!32;CL:0000219!4.82e-09!390;CL:0002620!9.94e-09!23;CL:0000134!1.46e-08!358;CL:0002139!1.49e-08!24;CL:0000115!4.15e-08!35;CL:0000071!9.84e-08!18;CL:0002546!9.84e-08!18;CL:0002078!1.25e-07!44;CL:0000003!5.93e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.99e-09;32!CL:0002620;4.68e-09;23!CL:0000057;8.21e-09;73!CL:0002139;1.20e-08;24!CL:0000192;2.84e-08;43!CL:0000071;6.87e-08;18!CL:0000860;1.05e-07;33!CL:0002057;1.05e-07;33!CL:0000473;2.21e-07;39!CL:0000234;2.21e-07;39!CL:0000115;3.48e-07;36!CL:0000187;7.99e-07;55 | |ontology_enrichment_celltype_v019=CL:0000359;2.99e-09;32!CL:0002620;4.68e-09;23!CL:0000057;8.21e-09;73!CL:0002139;1.20e-08;24!CL:0000192;2.84e-08;43!CL:0000071;6.87e-08;18!CL:0000860;1.05e-07;33!CL:0002057;1.05e-07;33!CL:0000473;2.21e-07;39!CL:0000234;2.21e-07;39!CL:0000115;3.48e-07;36!CL:0000187;7.99e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.40e-21,76;CL:0000048,3.91e-20,427;CL:0000723,8.85e-19,433;CL:0000034,2.66e-17,441;CL:0000222,5.23e-17,121;CL:0000680,1.91e-12,58;CL:0000056,1.91e-12,58;CL:0000355,1.91e-12,58;CL:0000187,8.07e-12,55;CL:0000192,1.32e-10,43;CL:0000514,1.32e-10,43;CL:0002320,2.63e-10,361;CL:0000393,5.50e-10,61;CL:0000211,5.50e-10,61;CL:0000219,1.45e-09,386;CL:0000359,1.84e-09,32;CL:0002620,3.84e-09,23;CL:0000134,5.31e-09,354;CL:0002139,8.74e-09,24;CL:0000115,2.78e-08,36;CL:0000071,6.14e-08,18;CL:0002546,6.14e-08,18;CL:0002078,1.38e-07,45;CL:0000473,5.29e-07,48;CL:0000234,5.29e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000514;2.84e-08;43!CL:0002546;6.87e-08;18!CL:0000355;4.55e-07;58 | |ontology_enrichment_development_v019=CL:0000514;2.84e-08;43!CL:0002546;6.87e-08;18!CL:0000355;4.55e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.42e-20!167;UBERON:0003081!4.41e-20!216;UBERON:0002049!1.59e-19!79;UBERON:0007798!1.59e-19!79;UBERON:0004535!2.38e-18!110;UBERON:0000055!1.86e-17!69;UBERON:0001009!2.22e-17!113;UBERON:0000914!2.11e-16!83;UBERON:0002329!2.11e-16!83;UBERON:0003077!2.11e-16!83;UBERON:0003059!2.11e-16!83;UBERON:0007282!2.11e-16!83;UBERON:0009618!2.11e-16!83;UBERON:0007285!2.11e-16!83;UBERON:0001981!3.11e-16!60;UBERON:0007500!3.11e-16!60;UBERON:0004537!3.11e-16!60;UBERON:0006965!3.11e-16!60;UBERON:0004872!1.84e-15!84;UBERON:0001637!1.50e-14!42;UBERON:0003509!1.50e-14!42;UBERON:0004572!1.50e-14!42;UBERON:0004290!1.71e-14!70;UBERON:0000926!1.96e-12!448;UBERON:0004120!1.96e-12!448;UBERON:0006603!1.96e-12!448;UBERON:0000486!2.22e-12!82;UBERON:0004573!5.02e-11!33;UBERON:0004571!5.02e-11!33;UBERON:0001134!8.77e-11!61;UBERON:0002036!8.77e-11!61;UBERON:0003082!8.77e-11!61;UBERON:0002384!2.61e-10!375;UBERON:0002385!3.29e-10!63;UBERON:0001015!3.29e-10!63;UBERON:0000383!3.29e-10!63;UBERON:0004765!4.62e-09!101;UBERON:0001434!4.62e-09!101;UBERON:0000468!1.98e-08!659;UBERON:0003914!9.47e-08!118;UBERON:0001986!9.84e-08!18;UBERON:0004638!9.84e-08!18;UBERON:0004852!9.84e-08!18;UBERON:0002199!1.44e-07!45;UBERON:0002416!1.44e-07!45;UBERON:0000480!2.98e-07!626;UBERON:0006914!3.32e-07!25;UBERON:0001474!3.80e-07!86;UBERON:0000467!3.84e-07!625;UBERON:0002371!4.03e-07!80;UBERON:0000947!4.32e-07!21;UBERON:0010191!4.32e-07!21 | |ontology_enrichment_uberon=UBERON:0002204!3.42e-20!167;UBERON:0003081!4.41e-20!216;UBERON:0002049!1.59e-19!79;UBERON:0007798!1.59e-19!79;UBERON:0004535!2.38e-18!110;UBERON:0000055!1.86e-17!69;UBERON:0001009!2.22e-17!113;UBERON:0000914!2.11e-16!83;UBERON:0002329!2.11e-16!83;UBERON:0003077!2.11e-16!83;UBERON:0003059!2.11e-16!83;UBERON:0007282!2.11e-16!83;UBERON:0009618!2.11e-16!83;UBERON:0007285!2.11e-16!83;UBERON:0001981!3.11e-16!60;UBERON:0007500!3.11e-16!60;UBERON:0004537!3.11e-16!60;UBERON:0006965!3.11e-16!60;UBERON:0004872!1.84e-15!84;UBERON:0001637!1.50e-14!42;UBERON:0003509!1.50e-14!42;UBERON:0004572!1.50e-14!42;UBERON:0004290!1.71e-14!70;UBERON:0000926!1.96e-12!448;UBERON:0004120!1.96e-12!448;UBERON:0006603!1.96e-12!448;UBERON:0000486!2.22e-12!82;UBERON:0004573!5.02e-11!33;UBERON:0004571!5.02e-11!33;UBERON:0001134!8.77e-11!61;UBERON:0002036!8.77e-11!61;UBERON:0003082!8.77e-11!61;UBERON:0002384!2.61e-10!375;UBERON:0002385!3.29e-10!63;UBERON:0001015!3.29e-10!63;UBERON:0000383!3.29e-10!63;UBERON:0004765!4.62e-09!101;UBERON:0001434!4.62e-09!101;UBERON:0000468!1.98e-08!659;UBERON:0003914!9.47e-08!118;UBERON:0001986!9.84e-08!18;UBERON:0004638!9.84e-08!18;UBERON:0004852!9.84e-08!18;UBERON:0002199!1.44e-07!45;UBERON:0002416!1.44e-07!45;UBERON:0000480!2.98e-07!626;UBERON:0006914!3.32e-07!25;UBERON:0001474!3.80e-07!86;UBERON:0000467!3.84e-07!625;UBERON:0002371!4.03e-07!80;UBERON:0000947!4.32e-07!21;UBERON:0010191!4.32e-07!21 | ||
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| ||
|short_description=p2@uc001iot.1 | |short_description=p2@uc001iot.1 | ||
}} | }} |
Latest revision as of 12:14, 23 July 2015
Short description: | p2@uc001iot.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc001iot.1_5end |
Coexpression cluster: | C490_Hair_Fibroblast_Synoviocyte_Olfactory_Preadipocyte_Endothelial_Osteoblast |
Association with transcript: | 424bp_to_uc001iot.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.40e-21 | 76 |
multi fate stem cell | 3.91e-20 | 427 |
somatic stem cell | 8.85e-19 | 433 |
stem cell | 2.66e-17 | 441 |
mesodermal cell | 5.23e-17 | 121 |
muscle precursor cell | 1.91e-12 | 58 |
myoblast | 1.91e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.91e-12 | 58 |
muscle cell | 8.07e-12 | 55 |
smooth muscle cell | 1.32e-10 | 43 |
smooth muscle myoblast | 1.32e-10 | 43 |
connective tissue cell | 2.63e-10 | 361 |
electrically responsive cell | 5.50e-10 | 61 |
electrically active cell | 5.50e-10 | 61 |
motile cell | 1.45e-09 | 386 |
vascular associated smooth muscle cell | 1.84e-09 | 32 |
skin fibroblast | 3.84e-09 | 23 |
mesenchymal cell | 5.31e-09 | 354 |
endothelial cell of vascular tree | 8.74e-09 | 24 |
endothelial cell | 2.78e-08 | 36 |
blood vessel endothelial cell | 6.14e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.14e-08 | 18 |
meso-epithelial cell | 1.38e-07 | 45 |
defensive cell | 5.29e-07 | 48 |
phagocyte | 5.29e-07 | 48 |