FFCP PHASE1:Hg19::chr1:170633262..170633285,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=P54821 | |UniProt=P54821 | ||
|association_with_transcript=-27bp_to_NM_006902,NM_022716,uc001ghe.2,uc001ghf.2_5end | |association_with_transcript=-27bp_to_NM_006902,NM_022716,uc001ghe.2,uc001ghf.2_5end | ||
|cluster_id=chr1:170633262..170633285,+ | |||
|coexpression_cluster_id=C851 | |coexpression_cluster_id=C851 | ||
|description=CAGE_peak_3_at_PRRX1_5end | |description=CAGE_peak_3_at_PRRX1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!2.07e-41!180;CL:0000057!1.32e-23!75;CL:0000680!7.82e-17!57;CL:0000056!7.82e-17!57;CL:0000355!7.82e-17!57;CL:0000187!6.23e-16!54;CL:0000183!3.35e-14!59;CL:0000393!5.74e-14!60;CL:0000211!5.74e-14!60;CL:0000192!7.44e-12!42;CL:0000514!7.44e-12!42;CL:0000359!2.28e-11!32;CL:0002620!1.07e-10!23;CL:0002334!1.82e-07!12;CL:0002570!9.27e-07!8 | |ontology_enrichment_celltype=CL:0000055!2.07e-41!180;CL:0000057!1.32e-23!75;CL:0000680!7.82e-17!57;CL:0000056!7.82e-17!57;CL:0000355!7.82e-17!57;CL:0000187!6.23e-16!54;CL:0000183!3.35e-14!59;CL:0000393!5.74e-14!60;CL:0000211!5.74e-14!60;CL:0000192!7.44e-12!42;CL:0000514!7.44e-12!42;CL:0000359!2.28e-11!32;CL:0002620!1.07e-10!23;CL:0002334!1.82e-07!12;CL:0002570!9.27e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.19e-11;32!CL:0002620;2.58e-11;23!CL:0000057;1.70e-09;73!CL:0000187;1.71e-09;55!CL:0000192;4.12e-09;43!CL:0002334;2.94e-08;12!CL:0000393;4.53e-08;61!CL:0000211;4.53e-08;61!CL:0002320;1.47e-07;188!CL:0002570;1.72e-07;8!CL:0002494;3.21e-07;16 | |ontology_enrichment_celltype_v019=CL:0000359;1.19e-11;32!CL:0002620;2.58e-11;23!CL:0000057;1.70e-09;73!CL:0000187;1.71e-09;55!CL:0000192;4.12e-09;43!CL:0002334;2.94e-08;12!CL:0000393;4.53e-08;61!CL:0000211;4.53e-08;61!CL:0002320;1.47e-07;188!CL:0002570;1.72e-07;8!CL:0002494;3.21e-07;16 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.30e-24,76;CL:0000680,4.73e-18,58;CL:0000056,4.73e-18,58;CL:0000355,4.73e-18,58;CL:0000187,4.99e-17,55;CL:0000393,7.76e-15,61;CL:0000211,7.76e-15,61;CL:0000192,1.98e-12,43;CL:0000514,1.98e-12,43;CL:0000359,3.02e-12,32;CL:0002620,2.23e-11,23;CL:0000048,6.48e-09,427;CL:0002334,2.68e-08,12;CL:0000723,3.89e-08,433;CL:0002570,1.71e-07,8;CL:0002494,3.10e-07,16;CL:0000034,3.61e-07,441;CL:0002539,9.70e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000355;1.74e-09;58!CL:0000514;4.12e-09;43 | |ontology_enrichment_development_v019=CL:0000355;1.74e-09;58!CL:0000514;4.12e-09;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.11e-28!83;UBERON:0002329!4.11e-28!83;UBERON:0003077!4.11e-28!83;UBERON:0003059!4.11e-28!83;UBERON:0007282!4.11e-28!83;UBERON:0009618!4.11e-28!83;UBERON:0007285!4.11e-28!83;UBERON:0004290!2.23e-24!70;UBERON:0000486!2.69e-19!82;UBERON:0001134!6.29e-19!61;UBERON:0002036!6.29e-19!61;UBERON:0003082!6.29e-19!61;UBERON:0002385!8.34e-19!63;UBERON:0001015!8.34e-19!63;UBERON:0000383!8.34e-19!63;UBERON:0000475!1.35e-15!365;UBERON:0003102!1.23e-12!95;UBERON:0004872!5.69e-12!84;UBERON:0005256!6.62e-11!143;UBERON:0001637!1.08e-10!42;UBERON:0003509!1.08e-10!42;UBERON:0004572!1.08e-10!42;UBERON:0000481!3.08e-10!347;UBERON:0000468!5.45e-10!659;UBERON:0004573!6.57e-10!33;UBERON:0004571!6.57e-10!33;UBERON:0002199!6.93e-10!45;UBERON:0002416!6.93e-10!45;UBERON:0007100!9.03e-10!27;UBERON:0000948!1.83e-09!24;UBERON:0005498!1.83e-09!24;UBERON:0004140!1.83e-09!24;UBERON:0009881!1.83e-09!24;UBERON:0004141!1.83e-09!24;UBERON:0003084!1.83e-09!24;UBERON:0007005!1.83e-09!24;UBERON:0004139!1.83e-09!24;UBERON:0004291!1.83e-09!24;UBERON:0000479!9.64e-09!787;UBERON:0002097!1.27e-08!40;UBERON:0001981!5.41e-08!60;UBERON:0007500!5.41e-08!60;UBERON:0004537!5.41e-08!60;UBERON:0006965!5.41e-08!60;UBERON:0000119!8.60e-08!312;UBERON:0001013!1.91e-07!14;UBERON:0002100!2.24e-07!216;UBERON:0007023!2.77e-07!115;UBERON:0002067!3.14e-07!9;UBERON:0004016!3.14e-07!9;UBERON:0010083!3.14e-07!9;UBERON:0000483!3.88e-07!309;UBERON:0000467!8.81e-07!625 | |ontology_enrichment_uberon=UBERON:0000914!4.11e-28!83;UBERON:0002329!4.11e-28!83;UBERON:0003077!4.11e-28!83;UBERON:0003059!4.11e-28!83;UBERON:0007282!4.11e-28!83;UBERON:0009618!4.11e-28!83;UBERON:0007285!4.11e-28!83;UBERON:0004290!2.23e-24!70;UBERON:0000486!2.69e-19!82;UBERON:0001134!6.29e-19!61;UBERON:0002036!6.29e-19!61;UBERON:0003082!6.29e-19!61;UBERON:0002385!8.34e-19!63;UBERON:0001015!8.34e-19!63;UBERON:0000383!8.34e-19!63;UBERON:0000475!1.35e-15!365;UBERON:0003102!1.23e-12!95;UBERON:0004872!5.69e-12!84;UBERON:0005256!6.62e-11!143;UBERON:0001637!1.08e-10!42;UBERON:0003509!1.08e-10!42;UBERON:0004572!1.08e-10!42;UBERON:0000481!3.08e-10!347;UBERON:0000468!5.45e-10!659;UBERON:0004573!6.57e-10!33;UBERON:0004571!6.57e-10!33;UBERON:0002199!6.93e-10!45;UBERON:0002416!6.93e-10!45;UBERON:0007100!9.03e-10!27;UBERON:0000948!1.83e-09!24;UBERON:0005498!1.83e-09!24;UBERON:0004140!1.83e-09!24;UBERON:0009881!1.83e-09!24;UBERON:0004141!1.83e-09!24;UBERON:0003084!1.83e-09!24;UBERON:0007005!1.83e-09!24;UBERON:0004139!1.83e-09!24;UBERON:0004291!1.83e-09!24;UBERON:0000479!9.64e-09!787;UBERON:0002097!1.27e-08!40;UBERON:0001981!5.41e-08!60;UBERON:0007500!5.41e-08!60;UBERON:0004537!5.41e-08!60;UBERON:0006965!5.41e-08!60;UBERON:0000119!8.60e-08!312;UBERON:0001013!1.91e-07!14;UBERON:0002100!2.24e-07!216;UBERON:0007023!2.77e-07!115;UBERON:0002067!3.14e-07!9;UBERON:0004016!3.14e-07!9;UBERON:0010083!3.14e-07!9;UBERON:0000483!3.88e-07!309;UBERON:0000467!8.81e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.23e-12;31!UBERON:0001015;2.23e-12;31!UBERON:0000383;2.23e-12;31!UBERON:0007100;5.18e-10;25!UBERON:0002204;9.50e-10;70!UBERON:0000948;1.18e-09;22!UBERON:0001134;3.86e-09;16!UBERON:0002036;3.86e-09;16!UBERON:0004573;6.67e-09;33!UBERON:0004571;6.67e-09;33!UBERON:0001013;2.16e-08;14!UBERON:0002384;2.27e-08;198!UBERON:0002067;4.99e-08;9!UBERON:0002097;8.77e-08;41!UBERON:0002199;1.19e-07;46!UBERON:0002416;1.19e-07;46!UBERON:0001637;2.64e-07;42!UBERON:0003509;2.64e-07;42!UBERON:0004572;2.64e-07;42!UBERON:0003102;4.14e-07;50 | |ontology_enrichment_uberon_v019=UBERON:0002385;2.23e-12;31!UBERON:0001015;2.23e-12;31!UBERON:0000383;2.23e-12;31!UBERON:0007100;5.18e-10;25!UBERON:0002204;9.50e-10;70!UBERON:0000948;1.18e-09;22!UBERON:0001134;3.86e-09;16!UBERON:0002036;3.86e-09;16!UBERON:0004573;6.67e-09;33!UBERON:0004571;6.67e-09;33!UBERON:0001013;2.16e-08;14!UBERON:0002384;2.27e-08;198!UBERON:0002067;4.99e-08;9!UBERON:0002097;8.77e-08;41!UBERON:0002199;1.19e-07;46!UBERON:0002416;1.19e-07;46!UBERON:0001637;2.64e-07;42!UBERON:0003509;2.64e-07;42!UBERON:0004572;2.64e-07;42!UBERON:0003102;4.14e-07;50 | ||
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| ||
|short_description=p3@PRRX1 | |short_description=p3@PRRX1 | ||
}} | }} |
Latest revision as of 14:25, 18 September 2015
Short description: | p3@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRRX1_5end |
Coexpression cluster: | C851_Fibroblast_mesenchymal_Myoblast_normal_Olfactory_skeletal_Osteoblast |
Association with transcript: | -27bp_to_NM_006902, NM_022716, uc001ghe.2, uc001ghf.2_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.30e-24 | 76 |
muscle precursor cell | 4.73e-18 | 58 |
myoblast | 4.73e-18 | 58 |
multi-potent skeletal muscle stem cell | 4.73e-18 | 58 |
muscle cell | 4.99e-17 | 55 |
electrically responsive cell | 7.76e-15 | 61 |
electrically active cell | 7.76e-15 | 61 |
smooth muscle cell | 1.98e-12 | 43 |
smooth muscle myoblast | 1.98e-12 | 43 |
vascular associated smooth muscle cell | 3.02e-12 | 32 |
skin fibroblast | 2.23e-11 | 23 |
multi fate stem cell | 6.48e-09 | 427 |
preadipocyte | 2.68e-08 | 12 |
somatic stem cell | 3.89e-08 | 433 |
mesenchymal stem cell of adipose | 1.71e-07 | 8 |
cardiocyte | 3.10e-07 | 16 |
stem cell | 3.61e-07 | 441 |
aortic smooth muscle cell | 9.70e-07 | 10 |