FFCP PHASE1:Hg19::chr4:149365827..149365870,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4306 | |EntrezGene=4306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7979 | |HGNC=7979 | ||
|TSSclassifier=strong | |||
|UniProt=B0ZBF6 | |UniProt=B0ZBF6 | ||
|association_with_transcript=0bp_to_ENST00000344721_5end | |association_with_transcript=0bp_to_ENST00000344721_5end | ||
|cluster_id=chr4:149365827..149365870,- | |||
|coexpression_cluster_id=C22 | |coexpression_cluster_id=C22 | ||
|description=CAGE_peak_5_at_NR3C2_5end | |description=CAGE_peak_5_at_NR3C2_5end | ||
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|ontology_enrichment_celltype=CL:0000791!1.13e-14!18;CL:0000789!1.13e-14!18;CL:0002420!1.13e-14!18;CL:0002419!1.13e-14!18;CL:0000790!1.13e-14!18;CL:0000838!8.40e-11!52;CL:0000625!8.73e-11!11;CL:0000542!2.23e-10!53;CL:0000051!2.23e-10!53;CL:0000084!1.33e-08!25;CL:0000827!1.33e-08!25;CL:0000624!8.39e-07!6;CL:0000236!8.46e-07!14 | |ontology_enrichment_celltype=CL:0000791!1.13e-14!18;CL:0000789!1.13e-14!18;CL:0002420!1.13e-14!18;CL:0002419!1.13e-14!18;CL:0000790!1.13e-14!18;CL:0000838!8.40e-11!52;CL:0000625!8.73e-11!11;CL:0000542!2.23e-10!53;CL:0000051!2.23e-10!53;CL:0000084!1.33e-08!25;CL:0000827!1.33e-08!25;CL:0000624!8.39e-07!6;CL:0000236!8.46e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.71e-25;18!CL:0000789;5.71e-25;18!CL:0002419;5.71e-25;18!CL:0000625;1.72e-19;11!CL:0000084;1.37e-16;25!CL:0000542;2.41e-14;53!CL:0000236;6.02e-12;13!CL:0000624;5.73e-09;6!CL:0000623;3.41e-07;3!CL:0000226;6.55e-07;3!CL:0000842;6.55e-07;3 | |ontology_enrichment_celltype_v019=CL:0000791;5.71e-25;18!CL:0000789;5.71e-25;18!CL:0002419;5.71e-25;18!CL:0000625;1.72e-19;11!CL:0000084;1.37e-16;25!CL:0000542;2.41e-14;53!CL:0000236;6.02e-12;13!CL:0000624;5.73e-09;6!CL:0000623;3.41e-07;3!CL:0000226;6.55e-07;3!CL:0000842;6.55e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.54e-25,18;CL:0000789,5.54e-25,18;CL:0002420,5.54e-25,18;CL:0002419,5.54e-25,18;CL:0000790,5.54e-25,18;CL:0000838,1.83e-23,52;CL:0000542,7.60e-23,53;CL:0000051,7.60e-23,53;CL:0000625,1.64e-19,11;CL:0000084,1.34e-16,25;CL:0000827,1.34e-16,25;CL:0000236,3.18e-11,14;CL:0000624,5.81e-09,6;CL:0002087,8.37e-09,115;CL:0000738,4.97e-08,136;CL:0000623,3.15e-07,3;CL:0000825,3.15e-07,3;CL:0000226,6.62e-07,3;CL:0000842,6.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.71e-25;18!CL:0000051;2.41e-14;53 | |ontology_enrichment_development_v019=CL:0000790;5.71e-25;18!CL:0000051;2.41e-14;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;5.01e-19;22!UBERON:0001950;2.50e-16;20!UBERON:0000956;2.93e-16;25!UBERON:0000203;2.93e-16;25!UBERON:0001869;1.38e-13;32!UBERON:0001893;3.36e-12;34!UBERON:0002791;4.17e-12;32!UBERON:0003528;8.95e-11;34!UBERON:0002020;8.95e-11;34!UBERON:0000200;1.69e-10;6!UBERON:0002780;5.31e-09;41!UBERON:0001890;5.31e-09;41 | |ontology_enrichment_uberon_v019=UBERON:0002619;5.01e-19;22!UBERON:0001950;2.50e-16;20!UBERON:0000956;2.93e-16;25!UBERON:0000203;2.93e-16;25!UBERON:0001869;1.38e-13;32!UBERON:0001893;3.36e-12;34!UBERON:0002791;4.17e-12;32!UBERON:0003528;8.95e-11;34!UBERON:0002020;8.95e-11;34!UBERON:0000200;1.69e-10;6!UBERON:0002780;5.31e-09;41!UBERON:0001890;5.31e-09;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.21e-19,22;UBERON:0001950,1.20e-16,20;UBERON:0000956,1.44e-16,25;UBERON:0000203,1.44e-16,25;UBERON:0001869,1.49e-15,32;UBERON:0007023,1.64e-14,114;UBERON:0001893,2.39e-14,34;UBERON:0002791,1.06e-13,32;UBERON:0003528,1.26e-12,34;UBERON:0002020,1.26e-12,34;UBERON:0002780,2.16e-12,41;UBERON:0001890,2.16e-12,41;UBERON:0003080,2.16e-12,41;UBERON:0006240,2.16e-12,41;UBERON:0000073,9.24e-12,53;UBERON:0002616,9.24e-12,53;UBERON:0000200,7.42e-11,6;UBERON:0001049,8.25e-11,56;UBERON:0005068,8.25e-11,56;UBERON:0006241,8.25e-11,56;UBERON:0007135,8.25e-11,56;UBERON:0000955,1.24e-10,68;UBERON:0006238,1.24e-10,68;UBERON:0001017,1.13e-08,81;UBERON:0003056,1.91e-08,61;UBERON:0001016,6.09e-08,89;UBERON:0003075,9.87e-08,82;UBERON:0007284,9.87e-08,82;UBERON:0002346,4.37e-07,86 | |||
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| ||
|short_description=p5@NR3C2 | |short_description=p5@NR3C2 | ||
}} | }} |
Latest revision as of 00:51, 16 September 2015
Short description: | p5@NR3C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NR3C2_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 0bp_to_ENST00000344721_5end |
EntrezGene: | NR3C2 |
HGNC: | 7979 |
UniProt: | B0ZBF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.54e-25 | 18 |
alpha-beta T cell | 5.54e-25 | 18 |
immature T cell | 5.54e-25 | 18 |
mature T cell | 5.54e-25 | 18 |
immature alpha-beta T cell | 5.54e-25 | 18 |
lymphoid lineage restricted progenitor cell | 1.83e-23 | 52 |
lymphocyte | 7.60e-23 | 53 |
common lymphoid progenitor | 7.60e-23 | 53 |
CD8-positive, alpha-beta T cell | 1.64e-19 | 11 |
T cell | 1.34e-16 | 25 |
pro-T cell | 1.34e-16 | 25 |
B cell | 3.18e-11 | 14 |
CD4-positive, alpha-beta T cell | 5.81e-09 | 6 |
nongranular leukocyte | 8.37e-09 | 115 |
leukocyte | 4.97e-08 | 136 |
natural killer cell | 3.15e-07 | 3 |
pro-NK cell | 3.15e-07 | 3 |
single nucleate cell | 6.62e-07 | 3 |
mononuclear cell | 6.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.21e-19 | 22 |
neocortex | 1.20e-16 | 20 |
cerebral cortex | 1.44e-16 | 25 |
pallium | 1.44e-16 | 25 |
cerebral hemisphere | 1.49e-15 | 32 |
adult organism | 1.64e-14 | 114 |
telencephalon | 2.39e-14 | 34 |
regional part of telencephalon | 1.06e-13 | 32 |
brain grey matter | 1.26e-12 | 34 |
gray matter | 1.26e-12 | 34 |
regional part of forebrain | 2.16e-12 | 41 |
forebrain | 2.16e-12 | 41 |
anterior neural tube | 2.16e-12 | 41 |
future forebrain | 2.16e-12 | 41 |
regional part of nervous system | 9.24e-12 | 53 |
regional part of brain | 9.24e-12 | 53 |
gyrus | 7.42e-11 | 6 |
neural tube | 8.25e-11 | 56 |
neural rod | 8.25e-11 | 56 |
future spinal cord | 8.25e-11 | 56 |
neural keel | 8.25e-11 | 56 |
brain | 1.24e-10 | 68 |
future brain | 1.24e-10 | 68 |
central nervous system | 1.13e-08 | 81 |
pre-chordal neural plate | 1.91e-08 | 61 |
nervous system | 6.09e-08 | 89 |
neural plate | 9.87e-08 | 82 |
presumptive neural plate | 9.87e-08 | 82 |
neurectoderm | 4.37e-07 | 86 |