FFCP PHASE1:Hg19::chr3:30648232..30648243,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7048 | |EntrezGene=7048 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11773 | |HGNC=11773 | ||
|TSSclassifier=strong | |||
|UniProt=E9PDS4 | |UniProt=E9PDS4 | ||
|association_with_transcript=139bp_to_ENST00000359013,ENST00000383765_5end | |association_with_transcript=139bp_to_ENST00000359013,ENST00000383765_5end | ||
|cluster_id=chr3:30648232..30648243,+ | |||
|description=CAGE_peak_3_at_TGFBR2_5end | |description=CAGE_peak_3_at_TGFBR2_5end | ||
|id=chr3:30648232..30648243,+ | |id=chr3:30648232..30648243,+ | ||
|ontology_enrichment_celltype=CL:0002371!7.27e-20!591;CL:0000680!4.02e-18!57;CL:0000056!4.02e-18!57;CL:0000355!4.02e-18!57;CL:0000055!4.39e-17!180;CL:0000222!6.14e-17!119;CL:0000187!1.11e-16!54;CL:0000183!1.16e-15!59;CL:0000048!1.68e-15!430;CL:0000723!3.72e-15!436;CL:0000192!5.98e-15!42;CL:0000514!5.98e-15!42;CL:0000359!9.74e-15!32;CL:0000144!5.61e-14!625;CL:0000034!3.73e-13!444;CL:0000057!1.80e-12!75;CL:0000393!1.35e-11!60;CL:0000211!1.35e-11!60;CL:0002139!6.25e-11!24;CL:0000548!1.14e-08!679;CL:0000004!1.14e-08!679;CL:0000255!1.14e-08!679;CL:0000115!2.03e-08!35;CL:0000071!2.76e-08!18;CL:0002546!2.76e-08!18;CL:0000012!3.59e-08!682;CL:0002539!1.47e-07!10;CL:0000220!2.40e-07!246;CL:0002321!6.49e-07!248 | |ontology_enrichment_celltype=CL:0002371!7.27e-20!591;CL:0000680!4.02e-18!57;CL:0000056!4.02e-18!57;CL:0000355!4.02e-18!57;CL:0000055!4.39e-17!180;CL:0000222!6.14e-17!119;CL:0000187!1.11e-16!54;CL:0000183!1.16e-15!59;CL:0000048!1.68e-15!430;CL:0000723!3.72e-15!436;CL:0000192!5.98e-15!42;CL:0000514!5.98e-15!42;CL:0000359!9.74e-15!32;CL:0000144!5.61e-14!625;CL:0000034!3.73e-13!444;CL:0000057!1.80e-12!75;CL:0000393!1.35e-11!60;CL:0000211!1.35e-11!60;CL:0002139!6.25e-11!24;CL:0000548!1.14e-08!679;CL:0000004!1.14e-08!679;CL:0000255!1.14e-08!679;CL:0000115!2.03e-08!35;CL:0000071!2.76e-08!18;CL:0002546!2.76e-08!18;CL:0000012!3.59e-08!682;CL:0002539!1.47e-07!10;CL:0000220!2.40e-07!246;CL:0002321!6.49e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.83e-15;32!CL:0000192;1.24e-11;43!CL:0002139;1.35e-11;24!CL:0000187;5.42e-09;55!CL:0000071;8.67e-09;18!CL:0002539;4.81e-08;10!CL:0000115;7.65e-08;36!CL:0000393;3.57e-07;61!CL:0000211;3.57e-07;61 | |ontology_enrichment_celltype_v019=CL:0000359;6.83e-15;32!CL:0000192;1.24e-11;43!CL:0002139;1.35e-11;24!CL:0000187;5.42e-09;55!CL:0000071;8.67e-09;18!CL:0002539;4.81e-08;10!CL:0000115;7.65e-08;36!CL:0000393;3.57e-07;61!CL:0000211;3.57e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.71e-19,58;CL:0000056,3.71e-19,58;CL:0000355,3.71e-19,58;CL:0000222,2.97e-18,121;CL:0000187,1.30e-17,55;CL:0000048,2.55e-17,427;CL:0000723,4.77e-17,433;CL:0000192,1.04e-15,43;CL:0000514,1.04e-15,43;CL:0000359,2.50e-15,32;CL:0000034,2.62e-15,441;CL:0000393,2.20e-13,61;CL:0000211,2.20e-13,61;CL:0000057,2.81e-12,76;CL:0002139,1.19e-11,24;CL:0000115,3.51e-09,36;CL:0000071,8.36e-09,18;CL:0002546,8.36e-09,18;CL:0002539,5.05e-08,10;CL:0002321,5.57e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.24e-11;43!CL:0000355;5.99e-10;58!CL:0002546;8.67e-09;18 | |ontology_enrichment_development_v019=CL:0000514;1.24e-11;43!CL:0000355;5.99e-10;58!CL:0002546;8.67e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.57e-27!79;UBERON:0007798!5.57e-27!79;UBERON:0000055!2.76e-26!69;UBERON:0001009!1.84e-24!113;UBERON:0004535!7.69e-24!110;UBERON:0001981!3.09e-23!60;UBERON:0007500!3.09e-23!60;UBERON:0004537!3.09e-23!60;UBERON:0006965!3.09e-23!60;UBERON:0004872!1.35e-22!84;UBERON:0001637!8.64e-21!42;UBERON:0003509!8.64e-21!42;UBERON:0004572!8.64e-21!42;UBERON:0000914!4.82e-20!83;UBERON:0002329!4.82e-20!83;UBERON:0003077!4.82e-20!83;UBERON:0003059!4.82e-20!83;UBERON:0007282!4.82e-20!83;UBERON:0009618!4.82e-20!83;UBERON:0007285!4.82e-20!83;UBERON:0004290!5.06e-19!70;UBERON:0000486!5.09e-19!82;UBERON:0004573!9.64e-18!33;UBERON:0004571!9.64e-18!33;UBERON:0001134!3.33e-17!61;UBERON:0002036!3.33e-17!61;UBERON:0003082!3.33e-17!61;UBERON:0002385!9.31e-17!63;UBERON:0001015!9.31e-17!63;UBERON:0000383!9.31e-17!63;UBERON:0000926!1.23e-16!448;UBERON:0004120!1.23e-16!448;UBERON:0006603!1.23e-16!448;UBERON:0003914!2.75e-15!118;UBERON:0002204!1.20e-14!167;UBERON:0000490!1.25e-14!138;UBERON:0005256!1.05e-11!143;UBERON:0000947!1.45e-11!21;UBERON:0010191!1.45e-11!21;UBERON:0000467!5.01e-11!625;UBERON:0000480!6.81e-11!626;UBERON:0003081!1.07e-10!216;UBERON:0000468!1.89e-09!659;UBERON:0002100!1.92e-09!216;UBERON:0001986!2.76e-08!18;UBERON:0004638!2.76e-08!18;UBERON:0004852!2.76e-08!18;UBERON:0000479!1.08e-07!787;UBERON:0004237!1.47e-07!10;UBERON:0004695!1.47e-07!10;UBERON:0002111!1.47e-07!10;UBERON:0004178!1.47e-07!10;UBERON:0003102!2.81e-07!95;UBERON:0007100!5.84e-07!27 | |ontology_enrichment_uberon=UBERON:0002049!5.57e-27!79;UBERON:0007798!5.57e-27!79;UBERON:0000055!2.76e-26!69;UBERON:0001009!1.84e-24!113;UBERON:0004535!7.69e-24!110;UBERON:0001981!3.09e-23!60;UBERON:0007500!3.09e-23!60;UBERON:0004537!3.09e-23!60;UBERON:0006965!3.09e-23!60;UBERON:0004872!1.35e-22!84;UBERON:0001637!8.64e-21!42;UBERON:0003509!8.64e-21!42;UBERON:0004572!8.64e-21!42;UBERON:0000914!4.82e-20!83;UBERON:0002329!4.82e-20!83;UBERON:0003077!4.82e-20!83;UBERON:0003059!4.82e-20!83;UBERON:0007282!4.82e-20!83;UBERON:0009618!4.82e-20!83;UBERON:0007285!4.82e-20!83;UBERON:0004290!5.06e-19!70;UBERON:0000486!5.09e-19!82;UBERON:0004573!9.64e-18!33;UBERON:0004571!9.64e-18!33;UBERON:0001134!3.33e-17!61;UBERON:0002036!3.33e-17!61;UBERON:0003082!3.33e-17!61;UBERON:0002385!9.31e-17!63;UBERON:0001015!9.31e-17!63;UBERON:0000383!9.31e-17!63;UBERON:0000926!1.23e-16!448;UBERON:0004120!1.23e-16!448;UBERON:0006603!1.23e-16!448;UBERON:0003914!2.75e-15!118;UBERON:0002204!1.20e-14!167;UBERON:0000490!1.25e-14!138;UBERON:0005256!1.05e-11!143;UBERON:0000947!1.45e-11!21;UBERON:0010191!1.45e-11!21;UBERON:0000467!5.01e-11!625;UBERON:0000480!6.81e-11!626;UBERON:0003081!1.07e-10!216;UBERON:0000468!1.89e-09!659;UBERON:0002100!1.92e-09!216;UBERON:0001986!2.76e-08!18;UBERON:0004638!2.76e-08!18;UBERON:0004852!2.76e-08!18;UBERON:0000479!1.08e-07!787;UBERON:0004237!1.47e-07!10;UBERON:0004695!1.47e-07!10;UBERON:0002111!1.47e-07!10;UBERON:0004178!1.47e-07!10;UBERON:0003102!2.81e-07!95;UBERON:0007100!5.84e-07!27 | ||
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| ||
|short_description=p3@TGFBR2 | |short_description=p3@TGFBR2 | ||
}} | }} |
Latest revision as of 22:16, 17 September 2015
Short description: | p3@TGFBR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TGFBR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 139bp_to_ENST00000359013, ENST00000383765_5end |
EntrezGene: | TGFBR2 |
HGNC: | 11773 |
UniProt: | E9PDS4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.71e-19 | 58 |
myoblast | 3.71e-19 | 58 |
multi-potent skeletal muscle stem cell | 3.71e-19 | 58 |
mesodermal cell | 2.97e-18 | 121 |
muscle cell | 1.30e-17 | 55 |
multi fate stem cell | 2.55e-17 | 427 |
somatic stem cell | 4.77e-17 | 433 |
smooth muscle cell | 1.04e-15 | 43 |
smooth muscle myoblast | 1.04e-15 | 43 |
vascular associated smooth muscle cell | 2.50e-15 | 32 |
stem cell | 2.62e-15 | 441 |
electrically responsive cell | 2.20e-13 | 61 |
electrically active cell | 2.20e-13 | 61 |
fibroblast | 2.81e-12 | 76 |
endothelial cell of vascular tree | 1.19e-11 | 24 |
endothelial cell | 3.51e-09 | 36 |
blood vessel endothelial cell | 8.36e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.36e-09 | 18 |
aortic smooth muscle cell | 5.05e-08 | 10 |
embryonic cell | 5.57e-08 | 250 |