FFCP PHASE1:Hg19::chr10:116286563..116286598,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3983 | |EntrezGene=3983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=78 | |HGNC=78 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000369257_5end | |association_with_transcript=0bp_to_ENST00000369257_5end | ||
|cluster_id=chr10:116286563..116286598,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_4_at_ABLIM1_5end | |description=CAGE_peak_4_at_ABLIM1_5end | ||
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|ontology_enrichment_celltype=CL:0000542!3.10e-19!53;CL:0000051!3.10e-19!53;CL:0000838!8.53e-19!52;CL:0000791!8.77e-13!18;CL:0000789!8.77e-13!18;CL:0002420!8.77e-13!18;CL:0002419!8.77e-13!18;CL:0000790!8.77e-13!18;CL:0000084!2.52e-10!25;CL:0000827!2.52e-10!25;CL:0000738!5.59e-09!140;CL:0002087!7.68e-09!119;CL:0000625!1.45e-08!11;CL:0000945!4.56e-08!24;CL:0000826!4.56e-08!24;CL:0000236!4.90e-08!14 | |ontology_enrichment_celltype=CL:0000542!3.10e-19!53;CL:0000051!3.10e-19!53;CL:0000838!8.53e-19!52;CL:0000791!8.77e-13!18;CL:0000789!8.77e-13!18;CL:0002420!8.77e-13!18;CL:0002419!8.77e-13!18;CL:0000790!8.77e-13!18;CL:0000084!2.52e-10!25;CL:0000827!2.52e-10!25;CL:0000738!5.59e-09!140;CL:0002087!7.68e-09!119;CL:0000625!1.45e-08!11;CL:0000945!4.56e-08!24;CL:0000826!4.56e-08!24;CL:0000236!4.90e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.84e-13;18!CL:0000789;1.84e-13;18!CL:0002419;1.84e-13;18!CL:0000542;1.34e-11;53!CL:0000084;1.01e-10;25!CL:0000625;5.39e-09;11!CL:0000236;1.70e-08;13!CL:0000945;8.21e-08;24 | |ontology_enrichment_celltype_v019=CL:0000791;1.84e-13;18!CL:0000789;1.84e-13;18!CL:0002419;1.84e-13;18!CL:0000542;1.34e-11;53!CL:0000084;1.01e-10;25!CL:0000625;5.39e-09;11!CL:0000236;1.70e-08;13!CL:0000945;8.21e-08;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.29e-19,53;CL:0000051,2.29e-19,53;CL:0000838,6.65e-19,52;CL:0000791,1.79e-13,18;CL:0000789,1.79e-13,18;CL:0002420,1.79e-13,18;CL:0002419,1.79e-13,18;CL:0000790,1.79e-13,18;CL:0000084,1.32e-10,25;CL:0000827,1.32e-10,25;CL:0000625,5.35e-09,11;CL:0002087,7.21e-09,115;CL:0000738,8.95e-09,136;CL:0000236,1.95e-08,14;CL:0000945,7.62e-08,24;CL:0000826,7.62e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000790;1.84e-13;18!CL:0000051;1.34e-11;53 | |ontology_enrichment_development_v019=CL:0000790;1.84e-13;18!CL:0000051;1.34e-11;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.47e-28!115;UBERON:0001049!5.63e-09!57;UBERON:0005068!5.63e-09!57;UBERON:0006241!5.63e-09!57;UBERON:0007135!5.63e-09!57;UBERON:0002616!9.26e-08!59;UBERON:0003080!6.44e-07!42;UBERON:0000178!7.82e-07!15;UBERON:0000179!7.82e-07!15;UBERON:0000463!7.82e-07!15;UBERON:0002780!9.86e-07!41;UBERON:0001890!9.86e-07!41;UBERON:0006240!9.86e-07!41 | |ontology_enrichment_uberon=UBERON:0007023!1.47e-28!115;UBERON:0001049!5.63e-09!57;UBERON:0005068!5.63e-09!57;UBERON:0006241!5.63e-09!57;UBERON:0007135!5.63e-09!57;UBERON:0002616!9.26e-08!59;UBERON:0003080!6.44e-07!42;UBERON:0000178!7.82e-07!15;UBERON:0000179!7.82e-07!15;UBERON:0000463!7.82e-07!15;UBERON:0002780!9.86e-07!41;UBERON:0001890!9.86e-07!41;UBERON:0006240!9.86e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.32e-08;114!UBERON:0000178;8.71e-07;15!UBERON:0000179;8.71e-07;15!UBERON:0000463;8.71e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0007023;1.32e-08;114!UBERON:0000178;8.71e-07;15!UBERON:0000179;8.71e-07;15!UBERON:0000463;8.71e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.43e-30,114;UBERON:0001049,2.58e-09,56;UBERON:0005068,2.58e-09,56;UBERON:0006241,2.58e-09,56;UBERON:0007135,2.58e-09,56;UBERON:0000073,5.89e-09,53;UBERON:0002616,5.89e-09,53;UBERON:0011216,2.14e-07,223;UBERON:0002780,2.68e-07,41;UBERON:0001890,2.68e-07,41;UBERON:0003080,2.68e-07,41;UBERON:0006240,2.68e-07,41;UBERON:0002346,6.91e-07,86;UBERON:0000178,7.00e-07,15;UBERON:0000179,7.00e-07,15;UBERON:0000463,7.00e-07,15 | |||
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| ||
|short_description=p4@ABLIM1 | |short_description=p4@ABLIM1 | ||
}} | }} |
Latest revision as of 12:43, 16 September 2015
Short description: | p4@ABLIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ABLIM1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000369257_5end |
EntrezGene: | ABLIM1 |
HGNC: | 78 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.29e-19 | 53 |
common lymphoid progenitor | 2.29e-19 | 53 |
lymphoid lineage restricted progenitor cell | 6.65e-19 | 52 |
mature alpha-beta T cell | 1.79e-13 | 18 |
alpha-beta T cell | 1.79e-13 | 18 |
immature T cell | 1.79e-13 | 18 |
mature T cell | 1.79e-13 | 18 |
immature alpha-beta T cell | 1.79e-13 | 18 |
T cell | 1.32e-10 | 25 |
pro-T cell | 1.32e-10 | 25 |
CD8-positive, alpha-beta T cell | 5.35e-09 | 11 |
nongranular leukocyte | 7.21e-09 | 115 |
leukocyte | 8.95e-09 | 136 |
B cell | 1.95e-08 | 14 |
lymphocyte of B lineage | 7.62e-08 | 24 |
pro-B cell | 7.62e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.43e-30 | 114 |
neural tube | 2.58e-09 | 56 |
neural rod | 2.58e-09 | 56 |
future spinal cord | 2.58e-09 | 56 |
neural keel | 2.58e-09 | 56 |
regional part of nervous system | 5.89e-09 | 53 |
regional part of brain | 5.89e-09 | 53 |
organ system subdivision | 2.14e-07 | 223 |
regional part of forebrain | 2.68e-07 | 41 |
forebrain | 2.68e-07 | 41 |
anterior neural tube | 2.68e-07 | 41 |
future forebrain | 2.68e-07 | 41 |
neurectoderm | 6.91e-07 | 86 |
blood | 7.00e-07 | 15 |
haemolymphatic fluid | 7.00e-07 | 15 |
organism substance | 7.00e-07 | 15 |