FFCP PHASE1:Mm9::chr4:9196432..9196482,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74438 | |EntrezGene=74438 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q9D4C9 | |UniProt=Q9D4C9 | ||
|association_with_transcript=0bp_to_ENSMUST00000038841,ENSMUST00000128117,ENSMUST00000142369,ENSMUST00000147285,NM_028940,uc008ryc.2,uc008ryd.2,uc008rye.2_5end | |association_with_transcript=0bp_to_ENSMUST00000038841,ENSMUST00000128117,ENSMUST00000142369,ENSMUST00000147285,NM_028940,uc008ryc.2,uc008ryd.2,uc008rye.2_5end | ||
|cluster_id=chr4:9196432..9196482,+ | |||
|description=CAGE_peak_1_at_Clvs1_5end | |description=CAGE_peak_1_at_Clvs1_5end | ||
|id=chr4:9196432..9196482,+ | |id=chr4:9196432..9196482,+ | ||
|ontology_enrichment_celltype=CL:0000540!7.27e-18!33;CL:0000047!7.27e-18!33;CL:0000031!7.27e-18!33;CL:0000404!7.27e-18!33;CL:0000117!4.86e-14!23;CL:0000337!4.86e-14!23;CL:0000393!1.52e-12!39;CL:0000211!1.52e-12!39;CL:0002319!9.13e-12!43;CL:0000221!9.54e-12!44;CL:0000133!9.54e-12!44;CL:0000055!5.40e-08!50 | |ontology_enrichment_celltype=CL:0000540!7.27e-18!33;CL:0000047!7.27e-18!33;CL:0000031!7.27e-18!33;CL:0000404!7.27e-18!33;CL:0000117!4.86e-14!23;CL:0000337!4.86e-14!23;CL:0000393!1.52e-12!39;CL:0000211!1.52e-12!39;CL:0002319!9.13e-12!43;CL:0000221!9.54e-12!44;CL:0000133!9.54e-12!44;CL:0000055!5.40e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.63e-20,33;CL:0000047,8.63e-20,33;CL:0000031,8.63e-20,33;CL:0000404,8.63e-20,33;CL:0000117,3.29e-16,23;CL:0000337,3.29e-16,23;CL:0000393,1.13e-14,39;CL:0000211,1.13e-14,39;CL:0002319,1.94e-13,43;CL:0000221,7.73e-13,44;CL:0000133,7.73e-13,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.24e-30!75;UBERON:0001016!3.24e-30!75;UBERON:0001017!3.97e-30!73;UBERON:0005743!3.97e-30!73;UBERON:0002346!5.27e-30!71;UBERON:0003075!5.27e-30!71;UBERON:0007284!5.27e-30!71;UBERON:0004121!2.83e-28!102;UBERON:0000924!2.83e-28!102;UBERON:0006601!2.83e-28!102;UBERON:0001049!3.32e-24!52;UBERON:0005068!3.32e-24!52;UBERON:0006241!3.32e-24!52;UBERON:0007135!3.32e-24!52;UBERON:0000033!6.46e-24!63;UBERON:0000955!4.86e-23!50;UBERON:0006238!4.86e-23!50;UBERON:0002616!3.25e-22!49;UBERON:0003056!1.72e-21!49;UBERON:0002020!3.74e-19!34;UBERON:0003080!5.66e-19!40;UBERON:0002780!3.33e-18!39;UBERON:0001890!3.33e-18!39;UBERON:0006240!3.33e-18!39;UBERON:0002791!4.18e-16!29;UBERON:0003528!4.18e-16!29;UBERON:0001893!4.18e-16!29;UBERON:0000956!3.01e-11!21;UBERON:0001869!3.01e-11!21;UBERON:0000203!3.01e-11!21;UBERON:0007811!6.10e-11!86;UBERON:0002619!5.33e-09!17;UBERON:0000153!1.87e-08!94;UBERON:0002021!5.28e-08!10;UBERON:0000411!5.28e-08!10;UBERON:0001950!5.28e-08!10 | |ontology_enrichment_uberon=UBERON:0000073!3.24e-30!75;UBERON:0001016!3.24e-30!75;UBERON:0001017!3.97e-30!73;UBERON:0005743!3.97e-30!73;UBERON:0002346!5.27e-30!71;UBERON:0003075!5.27e-30!71;UBERON:0007284!5.27e-30!71;UBERON:0004121!2.83e-28!102;UBERON:0000924!2.83e-28!102;UBERON:0006601!2.83e-28!102;UBERON:0001049!3.32e-24!52;UBERON:0005068!3.32e-24!52;UBERON:0006241!3.32e-24!52;UBERON:0007135!3.32e-24!52;UBERON:0000033!6.46e-24!63;UBERON:0000955!4.86e-23!50;UBERON:0006238!4.86e-23!50;UBERON:0002616!3.25e-22!49;UBERON:0003056!1.72e-21!49;UBERON:0002020!3.74e-19!34;UBERON:0003080!5.66e-19!40;UBERON:0002780!3.33e-18!39;UBERON:0001890!3.33e-18!39;UBERON:0006240!3.33e-18!39;UBERON:0002791!4.18e-16!29;UBERON:0003528!4.18e-16!29;UBERON:0001893!4.18e-16!29;UBERON:0000956!3.01e-11!21;UBERON:0001869!3.01e-11!21;UBERON:0000203!3.01e-11!21;UBERON:0007811!6.10e-11!86;UBERON:0002619!5.33e-09!17;UBERON:0000153!1.87e-08!94;UBERON:0002021!5.28e-08!10;UBERON:0000411!5.28e-08!10;UBERON:0001950!5.28e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.89e-33,75;UBERON:0001017,2.48e-33,73;UBERON:0002346,1.16e-31,64;UBERON:0003075,1.16e-31,64;UBERON:0007284,1.16e-31,64;UBERON:0004121,1.72e-29,95;UBERON:0000924,1.72e-29,95;UBERON:0006601,1.72e-29,95;UBERON:0000073,6.75e-28,54;UBERON:0001049,1.92e-26,52;UBERON:0005068,1.92e-26,52;UBERON:0006241,1.92e-26,52;UBERON:0007135,1.92e-26,52;UBERON:0010371,9.30e-25,73;UBERON:0003056,5.86e-23,49;UBERON:0000955,9.22e-23,47;UBERON:0006238,9.22e-23,47;UBERON:0002616,7.85e-22,46;UBERON:0002020,8.90e-22,34;UBERON:0003080,5.78e-20,40;UBERON:0010314,7.88e-20,92;UBERON:0002780,4.37e-19,39;UBERON:0001890,4.37e-19,39;UBERON:0006240,4.37e-19,39;UBERON:0003528,3.32e-18,29;UBERON:0002791,3.32e-18,29;UBERON:0001893,3.32e-18,29;UBERON:0000956,1.60e-12,21;UBERON:0001869,1.60e-12,21;UBERON:0000203,1.60e-12,21;UBERON:0002619,6.72e-10,17;UBERON:0002021,3.98e-09,10;UBERON:0000411,3.98e-09,10;UBERON:0001950,3.98e-09,10;UBERON:0003076,5.43e-07,12;UBERON:0003057,5.43e-07,12;UBERON:0002420,5.97e-07,8;UBERON:0007245,5.97e-07,8;UBERON:0010009,5.97e-07,8;UBERON:0010011,5.97e-07,8;UBERON:0000454,5.97e-07,8 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,15.6479653877968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0.336093799142464,0,0,0,31.9660008158165,44.4352422588508,27.2547503507657,0,0,0,0,0,0,0,28.0998849355974,26.3261579746797,28.8145197051393,23.4233807211119,18.5529574399355,23.1507610516263,15.2394298918996,16.5459381589804,40.7428759697738,42.6475709204527,48.2324514424605,36.2687291258033,41.0779519774819,45.3194632384381,34.8978748751726,28.138130501584,39.8803426697474,48.3190880176815,44.4199644093201,46.9726603479757,1.06016670666458,1.36028808192214,0,0,0,0,0,0,2.24711072210803,0,0,0,0.563373679106722,0,0,0,0,0,0,1.94112595522402,0,5.19547486726887,3.64319186208885,6.08930956624282,2.53677046981664,5.12456977878917,5.17390311397101,1.25666591329675,0,0.433798070759735,0,0,0,0,1.86391761218122,121.211249962781,85.6637030867031,0,0,0,0,64.5597655834786,72.285095245343,33.8010207183605,58.7526202249894,43.9830586608169,67.1155383927379,52.7284104970212,0.101839363850316,0,0,3.99839526184301,1.95180664444056,4.36813998423599,5.76198815377118,7.08312643827861,10.2054748726992,14.9893052733274,15.4607845523553,9.05461797586555,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,58.0400258036991,33.5469036356467,0,0.528901133327089,3.41261200856374,5.10920678092965,4.63922860759536,4.23535401709019,3.11329261382818,2.28270751335071,0.474529061544512,1.97638745668813,0.502670417600539,0.994782360205754,0.779856348476481,0,0.432276099749388,0.199141273254367,0.189667900953082,1.71372768914593,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0.393117990226406,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0.339490171550376,0.469380496577004,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,67.2706972048848,54.0345875190057,0,0,18.6149849455591,15.6175497718655,20.8960695800815,5.4962823529087,12.2539270745317,15.286132662597,17.8116708736954,25.7185154961954,28.0654322342032,80.00900778903,0,0,0,0,0,0.728341908464944,0.604647113929502,0.188605079755898,0,0,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,0,54.8107765263599,1.44048875225048,0.646793418913773,1.50035924522115,0.886701168211368,2.67553226403106,4.60737257685939,2.43571959291679,3.05073220482823,0.21183207086382,1.10264199027481,0,0,0,0,0,0.291480836629851,64.8988557036784,0,0,0,0,0,0,0,0,0,0,3.16335993581135,2.64315307264903,3.34816556547584,2.50905955217362,1.9652630737156,1.75323650300267,0.743881101528023,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0.375364950902364,0,0,0,55.9104324190896,53.8580526713397,51.5605962095457,50.6966887913878,43.1601987455505,43.0574521512129,40.5013500139084,61.243683638494,62.9867948488044,41.4208249401456,6.95375228813984,12.369771075432,9.73181552798565,11.6691224192781,7.1268475293514,6.25067928730048,8.88986911206461,8.03536723231687,8.3438994493872,6.57012750585873,10.3926512954998,9.24269072791773,11.143339388916,9.21962194630118,7.63891737109657,7.62069906052918,8.80720877180902,5.78727661391115,9.47797571847605,8.53753736779504,10.6289468239479,6.38912902173615,6.19934093863034,8.28474574804273,10.9166881281784,8.630690004951,9.51225458938417,10.5227884575137,9.91370031074791,8.97827634652382,8.89762635931306,6.59980031916275,4.50154147486658,7.12709469455443,7.33045121728337,12.4905288968973,8.18760629558929,4.51229213501426,4.78220830172108,1.54413993383661,1.15933917810211 | |phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,15.6479653877968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0.336093799142464,0,0,0,31.9660008158165,44.4352422588508,27.2547503507657,0,0,0,0,0,0,0,28.0998849355974,26.3261579746797,28.8145197051393,23.4233807211119,18.5529574399355,23.1507610516263,15.2394298918996,16.5459381589804,40.7428759697738,42.6475709204527,48.2324514424605,36.2687291258033,41.0779519774819,45.3194632384381,34.8978748751726,28.138130501584,39.8803426697474,48.3190880176815,44.4199644093201,46.9726603479757,1.06016670666458,1.36028808192214,0,0,0,0,0,0,2.24711072210803,0,0,0,0.563373679106722,0,0,0,0,0,0,1.94112595522402,0,5.19547486726887,3.64319186208885,6.08930956624282,2.53677046981664,5.12456977878917,5.17390311397101,1.25666591329675,0,0.433798070759735,0,0,0,0,1.86391761218122,121.211249962781,85.6637030867031,0,0,0,0,64.5597655834786,72.285095245343,33.8010207183605,58.7526202249894,43.9830586608169,67.1155383927379,52.7284104970212,0.101839363850316,0,0,3.99839526184301,1.95180664444056,4.36813998423599,5.76198815377118,7.08312643827861,10.2054748726992,14.9893052733274,15.4607845523553,9.05461797586555,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,58.0400258036991,33.5469036356467,0,0.528901133327089,3.41261200856374,5.10920678092965,4.63922860759536,4.23535401709019,3.11329261382818,2.28270751335071,0.474529061544512,1.97638745668813,0.502670417600539,0.994782360205754,0.779856348476481,0,0.432276099749388,0.199141273254367,0.189667900953082,1.71372768914593,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0.393117990226406,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0.339490171550376,0.469380496577004,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,67.2706972048848,54.0345875190057,0,0,18.6149849455591,15.6175497718655,20.8960695800815,5.4962823529087,12.2539270745317,15.286132662597,17.8116708736954,25.7185154961954,28.0654322342032,80.00900778903,0,0,0,0,0,0.728341908464944,0.604647113929502,0.188605079755898,0,0,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,0,54.8107765263599,1.44048875225048,0.646793418913773,1.50035924522115,0.886701168211368,2.67553226403106,4.60737257685939,2.43571959291679,3.05073220482823,0.21183207086382,1.10264199027481,0,0,0,0,0,0.291480836629851,64.8988557036784,0,0,0,0,0,0,0,0,0,0,3.16335993581135,2.64315307264903,3.34816556547584,2.50905955217362,1.9652630737156,1.75323650300267,0.743881101528023,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0.375364950902364,0,0,0,55.9104324190896,53.8580526713397,51.5605962095457,50.6966887913878,43.1601987455505,43.0574521512129,40.5013500139084,61.243683638494,62.9867948488044,41.4208249401456,6.95375228813984,12.369771075432,9.73181552798565,11.6691224192781,7.1268475293514,6.25067928730048,8.88986911206461,8.03536723231687,8.3438994493872,6.57012750585873,10.3926512954998,9.24269072791773,11.143339388916,9.21962194630118,7.63891737109657,7.62069906052918,8.80720877180902,5.78727661391115,9.47797571847605,8.53753736779504,10.6289468239479,6.38912902173615,6.19934093863034,8.28474574804273,10.9166881281784,8.630690004951,9.51225458938417,10.5227884575137,9.91370031074791,8.97827634652382,8.89762635931306,6.59980031916275,4.50154147486658,7.12709469455443,7.33045121728337,12.4905288968973,8.18760629558929,4.51229213501426,4.78220830172108,1.54413993383661,1.15933917810211 | ||
|short_description=p1@Clvs1 | |short_description=p1@Clvs1 | ||
}} | }} |
Latest revision as of 07:09, 27 September 2015
Short description: | p1@Clvs1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Clvs1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000038841, ENSMUST00000128117, ENSMUST00000142369, ENSMUST00000147285, NM_028940, uc008ryc.2, uc008ryd.2, uc008rye.2_5end |
EntrezGene: | Clvs1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.63e-20 | 33 |
neuronal stem cell | 8.63e-20 | 33 |
neuroblast | 8.63e-20 | 33 |
electrically signaling cell | 8.63e-20 | 33 |
CNS neuron (sensu Vertebrata) | 3.29e-16 | 23 |
neuroblast (sensu Vertebrata) | 3.29e-16 | 23 |
electrically responsive cell | 1.13e-14 | 39 |
electrically active cell | 1.13e-14 | 39 |
neural cell | 1.94e-13 | 43 |
ectodermal cell | 7.73e-13 | 44 |
neurectodermal cell | 7.73e-13 | 44 |