FFCP PHASE1:Mm9::chr5:116358523..116358531,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12704 | |EntrezGene=12704 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=D3Z1U0 | |UniProt=D3Z1U0 | ||
|association_with_transcript=-115bp_to_uc008zes.1_5end | |association_with_transcript=-115bp_to_uc008zes.1_5end | ||
|cluster_id=chr5:116358523..116358531,+ | |||
|description=CAGE_peak_8_at_Cit_5end | |description=CAGE_peak_8_at_Cit_5end | ||
|id=chr5:116358523..116358531,+ | |id=chr5:116358523..116358531,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.30e-11!23;CL:0000337!2.30e-11!23 | |ontology_enrichment_celltype=CL:0000117!2.30e-11!23;CL:0000337!2.30e-11!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,5.18e-14,3;CL:0000117,2.13e-10,23;CL:0000337,2.13e-10,23;CL:0002611,8.97e-09,2;CL:0000540,6.45e-07,33;CL:0000047,6.45e-07,33;CL:0000031,6.45e-07,33;CL:0000404,6.45e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.99e-24!52;UBERON:0005068!1.99e-24!52;UBERON:0006241!1.99e-24!52;UBERON:0007135!1.99e-24!52;UBERON:0000955!1.16e-22!50;UBERON:0006238!1.16e-22!50;UBERON:0002616!2.06e-21!49;UBERON:0001017!2.20e-21!73;UBERON:0005743!2.20e-21!73;UBERON:0000073!1.70e-20!75;UBERON:0001016!1.70e-20!75;UBERON:0002020!1.60e-19!34;UBERON:0002346!3.26e-18!71;UBERON:0003075!3.26e-18!71;UBERON:0007284!3.26e-18!71;UBERON:0000033!4.50e-18!63;UBERON:0003080!4.19e-15!40;UBERON:0004121!2.05e-14!102;UBERON:0000924!2.05e-14!102;UBERON:0006601!2.05e-14!102;UBERON:0002780!5.42e-14!39;UBERON:0001890!5.42e-14!39;UBERON:0006240!5.42e-14!39;UBERON:0002791!7.48e-14!29;UBERON:0003528!7.48e-14!29;UBERON:0001893!7.48e-14!29;UBERON:0003056!5.63e-13!49;UBERON:0002021!1.23e-11!10;UBERON:0000411!1.23e-11!10;UBERON:0001950!1.23e-11!10;UBERON:0007811!2.42e-11!86;UBERON:0003076!1.44e-10!12;UBERON:0003057!1.44e-10!12;UBERON:0002420!1.74e-10!8;UBERON:0007245!1.74e-10!8;UBERON:0010009!1.74e-10!8;UBERON:0010011!1.74e-10!8;UBERON:0000454!1.74e-10!8;UBERON:0000153!1.51e-09!94;UBERON:0002240!5.06e-09!6;UBERON:0005174!5.06e-09!6;UBERON:0001137!5.06e-09!6;UBERON:0002298!1.15e-08!6;UBERON:0000025!3.39e-08!114;UBERON:0001948!8.07e-08!5;UBERON:0002315!8.07e-08!5;UBERON:0004111!1.35e-07!122;UBERON:0000369!4.24e-07!5;UBERON:0002435!4.24e-07!5;UBERON:0000204!4.24e-07!5;UBERON:0010082!4.24e-07!5;UBERON:0002619!5.15e-07!17 | |ontology_enrichment_uberon=UBERON:0001049!1.99e-24!52;UBERON:0005068!1.99e-24!52;UBERON:0006241!1.99e-24!52;UBERON:0007135!1.99e-24!52;UBERON:0000955!1.16e-22!50;UBERON:0006238!1.16e-22!50;UBERON:0002616!2.06e-21!49;UBERON:0001017!2.20e-21!73;UBERON:0005743!2.20e-21!73;UBERON:0000073!1.70e-20!75;UBERON:0001016!1.70e-20!75;UBERON:0002020!1.60e-19!34;UBERON:0002346!3.26e-18!71;UBERON:0003075!3.26e-18!71;UBERON:0007284!3.26e-18!71;UBERON:0000033!4.50e-18!63;UBERON:0003080!4.19e-15!40;UBERON:0004121!2.05e-14!102;UBERON:0000924!2.05e-14!102;UBERON:0006601!2.05e-14!102;UBERON:0002780!5.42e-14!39;UBERON:0001890!5.42e-14!39;UBERON:0006240!5.42e-14!39;UBERON:0002791!7.48e-14!29;UBERON:0003528!7.48e-14!29;UBERON:0001893!7.48e-14!29;UBERON:0003056!5.63e-13!49;UBERON:0002021!1.23e-11!10;UBERON:0000411!1.23e-11!10;UBERON:0001950!1.23e-11!10;UBERON:0007811!2.42e-11!86;UBERON:0003076!1.44e-10!12;UBERON:0003057!1.44e-10!12;UBERON:0002420!1.74e-10!8;UBERON:0007245!1.74e-10!8;UBERON:0010009!1.74e-10!8;UBERON:0010011!1.74e-10!8;UBERON:0000454!1.74e-10!8;UBERON:0000153!1.51e-09!94;UBERON:0002240!5.06e-09!6;UBERON:0005174!5.06e-09!6;UBERON:0001137!5.06e-09!6;UBERON:0002298!1.15e-08!6;UBERON:0000025!3.39e-08!114;UBERON:0001948!8.07e-08!5;UBERON:0002315!8.07e-08!5;UBERON:0004111!1.35e-07!122;UBERON:0000369!4.24e-07!5;UBERON:0002435!4.24e-07!5;UBERON:0000204!4.24e-07!5;UBERON:0010082!4.24e-07!5;UBERON:0002619!5.15e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.83e-24,54;UBERON:0001017,1.22e-21,73;UBERON:0001016,5.59e-21,75;UBERON:0001049,1.59e-19,52;UBERON:0005068,1.59e-19,52;UBERON:0006241,1.59e-19,52;UBERON:0007135,1.59e-19,52;UBERON:0002020,8.16e-18,34;UBERON:0002240,3.61e-16,6;UBERON:0005174,3.61e-16,6;UBERON:0001137,3.61e-16,6;UBERON:0004121,7.02e-16,95;UBERON:0000924,7.02e-16,95;UBERON:0006601,7.02e-16,95;UBERON:0002346,2.54e-15,64;UBERON:0003075,2.54e-15,64;UBERON:0007284,2.54e-15,64;UBERON:0002021,1.59e-14,10;UBERON:0000411,1.59e-14,10;UBERON:0001950,1.59e-14,10;UBERON:0004684,5.18e-14,3;UBERON:0002275,5.18e-14,3;UBERON:0010371,4.51e-13,73;UBERON:0001948,6.46e-13,5;UBERON:0002315,6.46e-13,5;UBERON:0003080,1.18e-12,40;UBERON:0000955,1.71e-12,47;UBERON:0006238,1.71e-12,47;UBERON:0002780,8.56e-11,39;UBERON:0001890,8.56e-11,39;UBERON:0006240,8.56e-11,39;UBERON:0002616,9.79e-11,46;UBERON:0003528,4.88e-10,29;UBERON:0002791,4.88e-10,29;UBERON:0001893,4.88e-10,29;UBERON:0003056,5.94e-10,49;UBERON:0010314,9.23e-10,92;UBERON:0000956,6.94e-09,21;UBERON:0001869,6.94e-09,21;UBERON:0000203,6.94e-09,21;UBERON:0002256,8.97e-09,2;UBERON:0002619,2.49e-08,17;UBERON:0003076,5.21e-08,12;UBERON:0003057,5.21e-08,12;UBERON:0000025,2.68e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,1.99955689082663,1.32521124570968,0,0,0,4.40463523997555,4.21368215681119,3.22573719838111,0.395658863190582,0.640413505216868,0.52091337055676,0.279182999001381,1.12552522006336,0.916789486660861,2.35702868378934,1.42371680799103,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,2.54644086988199,1.83000241127451,0.251308704225729,1.91206752211504,1.53429274398198,1.87009240103604,2.10913641988085,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,1.84130094602871,2.29158205375759,1.54667864109319,0,2.2661816921691,3.37511250115903,0.900642406448441,2.71885445390523,0.51776031175182,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0.505394423527595,0,0.188626341386076,0,0,0,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0.282328141245992,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,1.99955689082663,1.32521124570968,0,0,0,4.40463523997555,4.21368215681119,3.22573719838111,0.395658863190582,0.640413505216868,0.52091337055676,0.279182999001381,1.12552522006336,0.916789486660861,2.35702868378934,1.42371680799103,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,2.54644086988199,1.83000241127451,0.251308704225729,1.91206752211504,1.53429274398198,1.87009240103604,2.10913641988085,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,1.84130094602871,2.29158205375759,1.54667864109319,0,2.2661816921691,3.37511250115903,0.900642406448441,2.71885445390523,0.51776031175182,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0.505394423527595,0,0.188626341386076,0,0,0,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0.282328141245992,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p8@Cit | |short_description=p8@Cit | ||
}} | }} |
Latest revision as of 17:50, 1 October 2015
Short description: | p8@Cit |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Cit_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -115bp_to_uc008zes.1_5end |
EntrezGene: | Cit |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 5.18e-14 | 3 |
CNS neuron (sensu Vertebrata) | 2.13e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.13e-10 | 23 |
neuron of the dorsal spinal cord | 8.97e-09 | 2 |
neuron | 6.45e-07 | 33 |
neuronal stem cell | 6.45e-07 | 33 |
neuroblast | 6.45e-07 | 33 |
electrically signaling cell | 6.45e-07 | 33 |