FFCP PHASE1:Hg19::chr2:202122747..202122819,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:202122747..202122819,+
|short_description=p5@CASP8
|description=CAGE_peak_5_at_CASP8_5end
|association_with_transcript=0bp_to_ENST00000358485,ENST000003922...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=841 | |EntrezGene=841 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1509 | |HGNC=1509 | ||
|TSSclassifier=strong | |||
|UniProt=Q14790,A8MU92 | |UniProt=Q14790,A8MU92 | ||
|association_with_transcript=0bp_to_ENST00000358485,ENST00000392261,NM_001080125,uc002uxs.1,uc002uxt.1,uc002uxu.1,uc002uxv.1,uc010ftd.1_5end | |||
|cluster_id=chr2:202122747..202122819,+ | |||
|description=CAGE_peak_5_at_CASP8_5end | |||
|id=chr2:202122747..202122819,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.51e-19!180;CL:0000057!3.85e-15!75;CL:0002371!5.23e-12!591;CL:0000548!4.52e-11!679;CL:0000004!4.52e-11!679;CL:0000255!4.52e-11!679;CL:0000012!1.12e-10!682;CL:0002620!5.61e-10!23;CL:0000680!4.25e-09!57;CL:0000056!4.25e-09!57;CL:0000355!4.25e-09!57;CL:0000144!8.60e-09!625;CL:0000048!9.31e-09!430;CL:0000723!1.01e-08!436;CL:0000187!1.59e-08!54;CL:0000183!5.80e-08!59;CL:0000034!2.68e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.14e-10;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.58e-15,76;CL:0002620,5.20e-10,23;CL:0000680,1.36e-09,58;CL:0000056,1.36e-09,58;CL:0000355,1.36e-09,58;CL:0000187,5.19e-09,55;CL:0000723,9.55e-09,433;CL:0000048,1.01e-08,427;CL:0000034,2.80e-07,441;CL:0000222,4.84e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.17e-18!448;UBERON:0004120!1.17e-18!448;UBERON:0006603!1.17e-18!448;UBERON:0002204!9.74e-18!167;UBERON:0000468!3.40e-17!659;UBERON:0000467!5.05e-16!625;UBERON:0000480!9.49e-16!626;UBERON:0000914!1.51e-11!83;UBERON:0002329!1.51e-11!83;UBERON:0003077!1.51e-11!83;UBERON:0003059!1.51e-11!83;UBERON:0007282!1.51e-11!83;UBERON:0009618!1.51e-11!83;UBERON:0007285!1.51e-11!83;UBERON:0003102!3.33e-11!95;UBERON:0002199!2.25e-10!45;UBERON:0002416!2.25e-10!45;UBERON:0004290!2.82e-10!70;UBERON:0002050!9.35e-10!605;UBERON:0005423!9.35e-10!605;UBERON:0002097!1.15e-09!40;UBERON:0000923!1.82e-09!604;UBERON:0005291!1.82e-09!604;UBERON:0006598!1.82e-09!604;UBERON:0002532!1.82e-09!604;UBERON:0000486!2.11e-09!82;UBERON:0000062!6.34e-09!511;UBERON:0005256!8.49e-09!143;UBERON:0002385!1.01e-08!63;UBERON:0001015!1.01e-08!63;UBERON:0000383!1.01e-08!63;UBERON:0000922!1.10e-08!612;UBERON:0004765!1.26e-08!101;UBERON:0001434!1.26e-08!101;UBERON:0001134!1.55e-08!61;UBERON:0002036!1.55e-08!61;UBERON:0003082!1.55e-08!61;UBERON:0002100!4.15e-08!216;UBERON:0003104!2.77e-07!238;UBERON:0009142!2.77e-07!238;UBERON:0001474!4.02e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.28e-07;41!UBERON:0002199;2.60e-07;46!UBERON:0002416;2.60e-07;46!UBERON:0003102;8.33e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.48e-18,167;UBERON:0000926,6.30e-14,315;UBERON:0004120,6.30e-14,315;UBERON:0006603,6.30e-14,315;UBERON:0003102,1.27e-11,99;UBERON:0002329,9.03e-11,71;UBERON:0003059,9.03e-11,71;UBERON:0007282,9.03e-11,71;UBERON:0004290,9.03e-11,71;UBERON:0009618,9.03e-11,71;UBERON:0002199,1.06e-10,46;UBERON:0002416,1.06e-10,46;UBERON:0003077,3.70e-10,72;UBERON:0007285,3.70e-10,72;UBERON:0007524,5.23e-10,73;UBERON:0002097,5.48e-10,41;UBERON:0000486,7.46e-10,83;UBERON:0002385,3.43e-09,64;UBERON:0001015,3.43e-09,64;UBERON:0000383,3.43e-09,64;UBERON:0001134,5.23e-09,62;UBERON:0002036,5.23e-09,62;UBERON:0003082,5.23e-09,62;UBERON:0005256,7.79e-09,122;UBERON:0001434,1.04e-08,100;UBERON:0003104,1.22e-08,160;UBERON:0009142,1.22e-08,160;UBERON:0007503,1.35e-08,78;UBERON:0000490,8.74e-08,148;UBERON:0005423,9.40e-08,581;UBERON:0004765,1.19e-07,90;UBERON:0002050,1.47e-07,564;UBERON:0002100,2.00e-07,199;UBERON:0000923,3.86e-07,560;UBERON:0010316,3.86e-07,560;UBERON:0005291,3.86e-07,560;UBERON:0006598,3.86e-07,560;UBERON:0010317,3.86e-07,560;UBERON:0002532,3.86e-07,560;UBERON:0001474,9.86e-07,82 | |||
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| ||
|short_description=p5@CASP8 | |||
}} | }} |
Latest revision as of 12:57, 19 September 2015
Short description: | p5@CASP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CASP8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000358485, ENST00000392261, NM_001080125, uc002uxs.1, uc002uxt.1, uc002uxu.1, uc002uxv.1, uc010ftd.1_5end |
EntrezGene: | CASP8 |
HGNC: | 1509 |
UniProt: | Q14790A8MU92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.58e-15 | 76 |
skin fibroblast | 5.20e-10 | 23 |
muscle precursor cell | 1.36e-09 | 58 |
myoblast | 1.36e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.36e-09 | 58 |
muscle cell | 5.19e-09 | 55 |
somatic stem cell | 9.55e-09 | 433 |
multi fate stem cell | 1.01e-08 | 427 |
stem cell | 2.80e-07 | 441 |
mesodermal cell | 4.84e-07 | 121 |