FFCP PHASE1:Mm9::chr1:75139336..75139347,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227298 | |EntrezGene=227298 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |MCL_coexpression_id=60 | ||
|TSSclassifier=NA | |||
|UniProt=Q6NS82 | |UniProt=Q6NS82 | ||
|association_with_transcript=-12bp_to_ENSMUST00000060113,ENSMUST00000097694,NM_170755,uc007bnt.1,uc007bnu.1_5end | |association_with_transcript=-12bp_to_ENSMUST00000060113,ENSMUST00000097694,NM_170755,uc007bnt.1,uc007bnu.1_5end | ||
|cluster_id=chr1:75139336..75139347,+ | |||
|description=CAGE_peak_3_at_Fam134a_5end | |description=CAGE_peak_3_at_Fam134a_5end | ||
|id=chr1:75139336..75139347,+ | |id=chr1:75139336..75139347,+ | ||
|ontology_enrichment_celltype=CL:0000117!9.12e-08!23;CL:0000337!9.12e-08!23 | |ontology_enrichment_celltype=CL:0000117!9.12e-08!23;CL:0000337!9.12e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.10e-07,23;CL:0000337,1.10e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.55e-19!52;UBERON:0005068!4.55e-19!52;UBERON:0006241!4.55e-19!52;UBERON:0007135!4.55e-19!52;UBERON:0001017!1.26e-17!73;UBERON:0005743!1.26e-17!73;UBERON:0000073!1.47e-17!75;UBERON:0001016!1.47e-17!75;UBERON:0000955!1.25e-16!50;UBERON:0006238!1.25e-16!50;UBERON:0002616!2.90e-16!49;UBERON:0004121!2.26e-15!102;UBERON:0000924!2.26e-15!102;UBERON:0006601!2.26e-15!102;UBERON:0002346!7.83e-15!71;UBERON:0003075!7.83e-15!71;UBERON:0007284!7.83e-15!71;UBERON:0002020!4.01e-14!34;UBERON:0000033!6.22e-14!63;UBERON:0003080!2.40e-13!40;UBERON:0002780!7.87e-13!39;UBERON:0001890!7.87e-13!39;UBERON:0006240!7.87e-13!39;UBERON:0003056!1.66e-11!49;UBERON:0002791!1.79e-11!29;UBERON:0003528!1.79e-11!29;UBERON:0001893!1.79e-11!29;UBERON:0000025!2.00e-08!114;UBERON:0004111!4.35e-08!122;UBERON:0000956!6.50e-08!21;UBERON:0001869!6.50e-08!21;UBERON:0000203!6.50e-08!21;UBERON:0002021!8.78e-07!10;UBERON:0000411!8.78e-07!10;UBERON:0001950!8.78e-07!10 | |ontology_enrichment_uberon=UBERON:0001049!4.55e-19!52;UBERON:0005068!4.55e-19!52;UBERON:0006241!4.55e-19!52;UBERON:0007135!4.55e-19!52;UBERON:0001017!1.26e-17!73;UBERON:0005743!1.26e-17!73;UBERON:0000073!1.47e-17!75;UBERON:0001016!1.47e-17!75;UBERON:0000955!1.25e-16!50;UBERON:0006238!1.25e-16!50;UBERON:0002616!2.90e-16!49;UBERON:0004121!2.26e-15!102;UBERON:0000924!2.26e-15!102;UBERON:0006601!2.26e-15!102;UBERON:0002346!7.83e-15!71;UBERON:0003075!7.83e-15!71;UBERON:0007284!7.83e-15!71;UBERON:0002020!4.01e-14!34;UBERON:0000033!6.22e-14!63;UBERON:0003080!2.40e-13!40;UBERON:0002780!7.87e-13!39;UBERON:0001890!7.87e-13!39;UBERON:0006240!7.87e-13!39;UBERON:0003056!1.66e-11!49;UBERON:0002791!1.79e-11!29;UBERON:0003528!1.79e-11!29;UBERON:0001893!1.79e-11!29;UBERON:0000025!2.00e-08!114;UBERON:0004111!4.35e-08!122;UBERON:0000956!6.50e-08!21;UBERON:0001869!6.50e-08!21;UBERON:0000203!6.50e-08!21;UBERON:0002021!8.78e-07!10;UBERON:0000411!8.78e-07!10;UBERON:0001950!8.78e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.85e-19,52;UBERON:0005068,4.85e-19,52;UBERON:0006241,4.85e-19,52;UBERON:0007135,4.85e-19,52;UBERON:0000073,5.11e-19,54;UBERON:0001017,1.71e-17,73;UBERON:0001016,1.99e-17,75;UBERON:0000955,3.08e-16,47;UBERON:0006238,3.08e-16,47;UBERON:0002616,7.09e-16,46;UBERON:0004121,5.83e-15,95;UBERON:0000924,5.83e-15,95;UBERON:0006601,5.83e-15,95;UBERON:0002346,9.39e-15,64;UBERON:0003075,9.39e-15,64;UBERON:0007284,9.39e-15,64;UBERON:0002020,4.63e-14,34;UBERON:0003080,2.71e-13,40;UBERON:0002780,8.92e-13,39;UBERON:0001890,8.92e-13,39;UBERON:0006240,8.92e-13,39;UBERON:0010371,1.16e-12,73;UBERON:0003528,2.11e-11,29;UBERON:0002791,2.11e-11,29;UBERON:0001893,2.11e-11,29;UBERON:0003056,2.33e-11,49;UBERON:0000025,1.51e-08,114;UBERON:0004111,3.33e-08,122;UBERON:0000956,7.92e-08,21;UBERON:0001869,7.92e-08,21;UBERON:0000203,7.92e-08,21;UBERON:0010314,7.52e-07,92;UBERON:0002021,8.14e-07,10;UBERON:0000411,8.14e-07,10;UBERON:0001950,8.14e-07,10 | |||
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|phase1_expression=1.92178616525753,2.44282785347553,2.72999543633722,2.72217790176147,4.50806156951712,1.00727563147134,1.86890112476421,2.96983643915625,0,0.234064526321993,0.171217968225505,1.03703806693937,1.36960583944965,2.27293046289393,1.99865857089398,2.22722794128809,2.79824751251259,1.57731082679119,0.959801035240171,2.54633791078818,7.14363637268986,1.48936426801328,1.30599894569468,1.91990907352088,1.60586496747019,2.8711598205751,1.29228598847722,0.646413698057667,3.6104449696711,3.02436155711917,1.99557459589774,2.54012269383853,3.69038872550742,0,1.44425809875637,1.99481574430191,2.24586291888606,2.51118978442145,3.906676722619,2.09409497589519,2.94115744015507,2.73218193983378,2.91306211818692,2.14024590558481,3.04130793658544,3.12029478674859,2.34717403304412,4.57852828398938,2.63623419281366,3.30530828426282,3.91961980551015,7.18762821824858,1.8456086666351,2.17608642603403,2.01656279485478,2.05807548828758,3.43840127926508,1.54701627683233,5.26022798234954,6.34789175126439,3.80298842103708,2.71075625655306,0.889294796111139,8.09909745553259,5.93319817540185,7.104801149461,4.19440154725767,7.30014780110954,3.21437798156281,3.51015439662396,3.36519938162211,6.28432165688368,8.39300455616131,2.57230678351403,2.87536413054709,0.919218786610021,1.10115880999389,6.63974158042976,6.60508093001847,4.2203612073662,5.94669683415663,3.64639359389732,5.58365998002762,5.6276261003168,5.80633341551878,7.07108605136802,5.55249555116501,4.47358669980721,2.42323818666189,2.04043212288321,1.73918693221007,6.0229671388697,3.39985666853875,4.31762553310254,1.29955283489534,4.48026887097336,2.10666630197628,1.53387290320252,2.85764605063156,1.7666978725517,1.12674735821344,0,2.54805239706646,7.11066703153331,2.81438353314578,1.01343946190039,0,3.9964357901671,0.776813650941515,2.9688427812965,1.90833859442749,2.13125834818499,3.68984795609694,2.26083960828934,1.99900802130698,1.75933227861546,4.94389935468748,1.44599356919912,6.19227386364912,2.10296904931632,1.54589062922275,1.93950101254089,3.72783522436244,7.90508151931177,6.49284791121711,1.78819938646014,1.07833612055328,2.39961092397363,1.39777249780371,6.14141621559773,10.0650132620098,4.02093926761166,8.16974304903699,7.16003280524926,4.57133698031032,5.353961681236,1.73126918545538,1.49288364732112,3.0326731012041,3.78795340595653,0.910843100738926,2.29902104433473,1.62055916824814,2.86339153887859,1.63287597963187,1.40925092313335,1.78033276663485,2.84573707812917,0.646703978798527,0.189106080167819,0.879755620819744,0.876782929710299,0.556094498451196,1.39300866608867,1.02891068203972,1.79130840136644,1.40442637462647,2.31613116403244,1.42081749697796,0.621377317606506,0.703578179943289,0.540186184383045,1.89395788468168,0.983821158737019,0.925602677324269,0.465067889500816,1.87791380979733,0.583826711835847,0.987359099480883,0.164167464079095,0.405344047729279,1.02339991197733,1.09775057645525,1.47627060636409,6.30869845692382,3.08713837137853,2.64335026387038,0.793351699990633,0.853153002140936,2.78684006232526,0.902072229254653,1.21010114774006,0.667134131534611,0.760902504450237,0.949058123089023,2.79988223030818,3.01602250560323,1.79060824837036,1.16978452271472,3.59527763461689,1.94524244887225,1.39398891278057,1.51734320762465,1.02823661348756,3.38123207019241,0.610953983535943,1.16371492300575,1.75339549725796,1.64414996523069,1.77132177575523,2.19798218977925,3.33172342588861,1.48226313543574,2.16898637430922,0.786235980452812,3.14806957338795,2.43432145666204,2.41177159752417,2.80088436959562,2.30156909960649,3.40483976227574,1.92192989231657,7.18841032636773,3.34926852901653,1.5601883655728,3.78868316920668,2.69096120282868,5.30687873499704,2.58654466233247,1.32643988239339,1.95557971730431,2.03694102930226,0.469380496577004,1.84256883185997,1.19021820443007,1.17080188714679,1.57635144106191,0.221464689648775,2.07291199254733,1.47476983244164,1.55416483679306,2.02508682014116,10.5553898757491,4.89515115436839,1.47529281905711,2.20749397043786,6.74312477948726,4.33683240391152,1.63934945376675,0.757412781613119,1.26203287766503,1.17131623288992,0.861693590931196,1.91175038362042,1.33679204449436,0.566153061577665,0.809621403349789,0.876767573733936,3.95287777946523,3.85585579706168,0.99358059645788,2.31485284767432,2.44330439030364,2.47455184458803,3.98235415019888,1.45668381692989,1.209294227859,1.13163047853539,1.47650946440386,1.53717573971964,2.06742634534577,1.45413491791002,0.356497378384721,1.26414703174326,0,4.12542172992747,4.76615448055303,2.16073312837572,2.45781499187234,1.92903331528433,3.01478397191865,3.74574516964348,1.64549020602121,4.87143918583359,1.64270195644597,3.38931313382112,1.54369878638473,1.81374878235628,2.58343082713449,1.14594557363496,1.67121281604391,2.1338316966858,1.1659233465194,3.8939313422207,2.9048049735635,1.03193433981611,2.40752885580625,2.44878994106098,3.00727300986255,3.20289442489132,0.849892149969277,1.11961161858926,2.07299960706636,0,1.58167996790568,0.813277868507395,0.86404272657441,0.62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| ||
|short_description=p3@Fam134a | |short_description=p3@Fam134a | ||
}} | }} |
Latest revision as of 15:08, 1 October 2015
Short description: | p3@Fam134a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fam134a_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -12bp_to_ENSMUST00000060113, ENSMUST00000097694, NM_170755, uc007bnt.1, uc007bnu.1_5end |
EntrezGene: | Fam134a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.10e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.10e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
neural tube | 4.85e-19 | 52 |
neural rod | 4.85e-19 | 52 |
future spinal cord | 4.85e-19 | 52 |
neural keel | 4.85e-19 | 52 |
regional part of nervous system | 5.11e-19 | 54 |
central nervous system | 1.71e-17 | 73 |
nervous system | 1.99e-17 | 75 |
brain | 3.08e-16 | 47 |
future brain | 3.08e-16 | 47 |
regional part of brain | 7.09e-16 | 46 |
ectoderm-derived structure | 5.83e-15 | 95 |
ectoderm | 5.83e-15 | 95 |
presumptive ectoderm | 5.83e-15 | 95 |
neurectoderm | 9.39e-15 | 64 |
neural plate | 9.39e-15 | 64 |
presumptive neural plate | 9.39e-15 | 64 |
gray matter | 4.63e-14 | 34 |
anterior neural tube | 2.71e-13 | 40 |
regional part of forebrain | 8.92e-13 | 39 |
forebrain | 8.92e-13 | 39 |
future forebrain | 8.92e-13 | 39 |
ecto-epithelium | 1.16e-12 | 73 |
brain grey matter | 2.11e-11 | 29 |
regional part of telencephalon | 2.11e-11 | 29 |
telencephalon | 2.11e-11 | 29 |
pre-chordal neural plate | 2.33e-11 | 49 |
tube | 1.51e-08 | 114 |
anatomical conduit | 3.33e-08 | 122 |
cerebral cortex | 7.92e-08 | 21 |
cerebral hemisphere | 7.92e-08 | 21 |
pallium | 7.92e-08 | 21 |
structure with developmental contribution from neural crest | 7.52e-07 | 92 |
occipital lobe | 8.14e-07 | 10 |
visual cortex | 8.14e-07 | 10 |
neocortex | 8.14e-07 | 10 |