FFCP PHASE1:Hg19::chr2:27301559..27301574,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:27301559..27301574,+
|short_description=p3@EMILIN1
|description=CAGE_peak_3_at_EMILIN1_5end
|association_with_transcript=53bp_to_uc002rii.3,uc010eyq.1_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11117 | |EntrezGene=11117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19880 | |HGNC=19880 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=53bp_to_uc002rii.3,uc010eyq.1_5end | |||
|cluster_id=chr2:27301559..27301574,+ | |||
|coexpression_cluster_id=C1901 | |||
|description=CAGE_peak_3_at_EMILIN1_5end | |||
|id=chr2:27301559..27301574,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.96e-38!180;CL:0000680!1.09e-23!57;CL:0000056!1.09e-23!57;CL:0000355!1.09e-23!57;CL:0000183!5.45e-23!59;CL:0000187!1.09e-22!54;CL:0000057!1.88e-20!75;CL:0000393!3.03e-18!60;CL:0000211!3.03e-18!60;CL:0000192!1.01e-17!42;CL:0000514!1.01e-17!42;CL:0000048!1.16e-12!430;CL:0000359!1.33e-11!32;CL:0000723!1.78e-11!436;CL:0000034!2.31e-10!444;CL:0002494!2.87e-09!16;CL:0002620!8.83e-09!23;CL:0000222!4.84e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000187;1.34e-14;55!CL:0000192;1.46e-14;43!CL:0000359;6.57e-12;32!CL:0000393;1.34e-10;61!CL:0000211;1.34e-10;61!CL:0000723;3.82e-10;61!CL:0000134;4.07e-10;55!CL:0002494;6.40e-10;16!CL:0000048;7.54e-10;58!CL:0002620;1.81e-09;23!CL:0000057;1.90e-09;73!CL:0002320;2.47e-08;188!CL:0000034;7.20e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.14e-26,58;CL:0000056,2.14e-26,58;CL:0000355,2.14e-26,58;CL:0000187,2.64e-25,55;CL:0000057,2.47e-23,76;CL:0000393,2.24e-20,61;CL:0000211,2.24e-20,61;CL:0000192,6.95e-20,43;CL:0000514,6.95e-20,43;CL:0000048,6.20e-18,427;CL:0000723,1.12e-16,433;CL:0000034,4.34e-15,441;CL:0000359,1.78e-12,32;CL:0002494,6.13e-10,16;CL:0002620,2.08e-09,23;CL:0000222,1.81e-08,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.46e-14;43!CL:0000355;3.92e-14;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!7.90e-26!70;UBERON:0000914!9.67e-26!83;UBERON:0002329!9.67e-26!83;UBERON:0003077!9.67e-26!83;UBERON:0003059!9.67e-26!83;UBERON:0007282!9.67e-26!83;UBERON:0009618!9.67e-26!83;UBERON:0007285!9.67e-26!83;UBERON:0002385!2.32e-24!63;UBERON:0001015!2.32e-24!63;UBERON:0000383!2.32e-24!63;UBERON:0001134!1.42e-23!61;UBERON:0002036!1.42e-23!61;UBERON:0003082!1.42e-23!61;UBERON:0005256!4.89e-20!143;UBERON:0000486!1.41e-18!82;UBERON:0004872!1.37e-16!84;UBERON:0001009!1.66e-13!113;UBERON:0004535!3.42e-13!110;UBERON:0002049!8.38e-13!79;UBERON:0007798!8.38e-13!79;UBERON:0000468!9.17e-13!659;UBERON:0003914!2.11e-12!118;UBERON:0000475!3.65e-12!365;UBERON:0000490!4.31e-12!138;UBERON:0002100!1.83e-11!216;UBERON:0000481!2.58e-11!347;UBERON:0000948!7.76e-11!24;UBERON:0005498!7.76e-11!24;UBERON:0004140!7.76e-11!24;UBERON:0009881!7.76e-11!24;UBERON:0004141!7.76e-11!24;UBERON:0003084!7.76e-11!24;UBERON:0007005!7.76e-11!24;UBERON:0004139!7.76e-11!24;UBERON:0004291!7.76e-11!24;UBERON:0007100!8.06e-11!27;UBERON:0000479!3.10e-10!787;UBERON:0001981!3.26e-10!60;UBERON:0007500!3.26e-10!60;UBERON:0004537!3.26e-10!60;UBERON:0006965!3.26e-10!60;UBERON:0000055!5.12e-10!69;UBERON:0000467!1.29e-09!625;UBERON:0000480!1.92e-09!626;UBERON:0003104!4.14e-09!238;UBERON:0009142!4.14e-09!238;UBERON:0004573!6.30e-09!33;UBERON:0004571!6.30e-09!33;UBERON:0001637!7.24e-09!42;UBERON:0003509!7.24e-09!42;UBERON:0004572!7.24e-09!42;UBERON:0000119!1.70e-08!312;UBERON:0000477!2.48e-08!286;UBERON:0000483!3.31e-08!309;UBERON:0001135!4.67e-08!15;UBERON:0000926!6.29e-08!448;UBERON:0004120!6.29e-08!448;UBERON:0006603!6.29e-08!448;UBERON:0004111!3.03e-07!241;UBERON:0003102!3.95e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;4.58e-12;31!UBERON:0001015;4.58e-12;31!UBERON:0000383;4.58e-12;31!UBERON:0000948;5.54e-11;22!UBERON:0007100;6.62e-11;25!UBERON:0004573;7.25e-09;33!UBERON:0004571;7.25e-09;33!UBERON:0001135;1.34e-08;15!UBERON:0002384;4.50e-08;198!UBERON:0001637;2.21e-07;42!UBERON:0003509;2.21e-07;42!UBERON:0004572;2.21e-07;42!UBERON:0002204;4.06e-07;70 | |||
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| ||
|short_description=p3@EMILIN1 | |||
}} | }} |
Latest revision as of 15:58, 16 September 2015
Short description: | p3@EMILIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EMILIN1_5end |
Coexpression cluster: | C1901_Cardiac_tridermal_Mesenchymal_sacrococcigeal_Hepatic_Smooth_Myoblast |
Association with transcript: | 53bp_to_uc002rii.3, uc010eyq.1_5end |
EntrezGene: | EMILIN1 |
HGNC: | 19880 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.14e-26 | 58 |
myoblast | 2.14e-26 | 58 |
multi-potent skeletal muscle stem cell | 2.14e-26 | 58 |
muscle cell | 2.64e-25 | 55 |
fibroblast | 2.47e-23 | 76 |
electrically responsive cell | 2.24e-20 | 61 |
electrically active cell | 2.24e-20 | 61 |
smooth muscle cell | 6.95e-20 | 43 |
smooth muscle myoblast | 6.95e-20 | 43 |
multi fate stem cell | 6.20e-18 | 427 |
somatic stem cell | 1.12e-16 | 433 |
stem cell | 4.34e-15 | 441 |
vascular associated smooth muscle cell | 1.78e-12 | 32 |
cardiocyte | 6.13e-10 | 16 |
skin fibroblast | 2.08e-09 | 23 |
mesodermal cell | 1.81e-08 | 121 |