FFCP PHASE1:Hg19::chr4:56042389..56042433,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:56042389..56042433,+
|short_description=p@chr4:56042389..56042433,+
|description=CAGE_peak_at_chr4:56042389..56042433,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:56042389..56042433,+ | |||
|description=CAGE_peak_at_chr4:56042389..56042433,+ | |||
|id=chr4:56042389..56042433,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.39e-25!24;CL:0000115!5.96e-25!35;CL:0002078!3.19e-20!44;CL:0000213!3.60e-20!57;CL:0000215!3.60e-20!57;CL:0000071!1.63e-15!18;CL:0002546!1.63e-15!18;CL:0000066!5.15e-14!254;CL:0005020!1.21e-12!6;CL:0002138!1.21e-12!6;CL:0005022!1.21e-12!6;CL:0000076!3.21e-09!62;CL:0000220!2.20e-08!246;CL:0002321!3.21e-08!248;CL:0002144!9.06e-08!3;CL:0000222!9.31e-08!119;CL:0002618!1.89e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.72e-35;24!CL:0000115;4.50e-34;36!CL:0000071;6.97e-25;18!CL:0002144;1.48e-22;3!CL:0002078;2.91e-22;45!CL:0000213;6.85e-16;58!CL:0000215;6.85e-16;58!CL:0002188;2.79e-14;5!CL:0002543;1.42e-11;6!CL:0002138;1.42e-11;6!CL:0002618;9.80e-11;3!CL:1000746;2.38e-10;7!CL:1000612;2.38e-10;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.65e-43,36;CL:0002139,8.61e-35,24;CL:0002078,5.50e-34,45;CL:0000213,9.44e-26,58;CL:0000215,9.44e-26,58;CL:0000071,4.46e-25,18;CL:0002546,4.46e-25,18;CL:0002144,8.83e-23,3;CL:0002188,2.80e-14,5;CL:0002543,2.05e-11,6;CL:0005020,2.64e-11,6;CL:0002138,2.64e-11,6;CL:0005022,2.64e-11,6;CL:0000222,6.87e-11,121;CL:0002618,1.20e-10,3;CL:1000746,2.39e-10,7;CL:1000612,2.39e-10,7;CL:0000066,4.01e-09,253 | |||
|ontology_enrichment_development_v019=CL:0002546;6.97e-25;18!CL:0005022;1.42e-11;6!CL:0000222;3.17e-07;121 | |||
|ontology_enrichment_disease=DOID:0050687!1.37e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3111;3.31e-09;1!DOID:3603;3.31e-09;1!DOID:3347;4.69e-09;1!DOID:0060085;1.13e-08;1!DOID:3165;1.13e-08;1!DOID:0060121;1.13e-08;1!DOID:2438;1.13e-08;1!DOID:4418;1.13e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,3.31e-09,1;DOID:3603,3.31e-09,1;DOID:3347,5.28e-09,1;DOID:0060085,1.13e-08,1;DOID:3165,1.13e-08,1;DOID:0060121,1.13e-08,1;DOID:2438,1.13e-08,1;DOID:4418,1.13e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.63e-15!18;UBERON:0004638!1.63e-15!18;UBERON:0004852!1.63e-15!18;UBERON:0000487!1.74e-14!22;UBERON:0006914!2.55e-12!25;UBERON:0001473!2.94e-09!8;UBERON:0004536!2.94e-09!8;UBERON:0006558!2.94e-09!8;UBERON:0002049!3.78e-08!79;UBERON:0007798!3.78e-08!79;UBERON:0001915!9.06e-08!3;UBERON:0001982!9.06e-08!3;UBERON:0000488!1.00e-07!4;UBERON:0002465!3.15e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;1.09e-25;22!UBERON:0004638;6.97e-25;18!UBERON:0001986;6.97e-25;18!UBERON:0004852;6.97e-25;18!UBERON:0010523;1.48e-22;3!UBERON:0001915;1.48e-22;3!UBERON:0001982;1.48e-22;3!UBERON:0006914;1.88e-22;25!UBERON:0000490;5.69e-17;33!UBERON:0000074;2.38e-10;7!UBERON:0001229;2.38e-10;7!UBERON:0000055;8.50e-10;65!UBERON:0001473;8.31e-09;8!UBERON:0004536;8.31e-09;8!UBERON:0006558;8.31e-09;8!UBERON:0000353;2.57e-08;15!UBERON:0001638;7.01e-08;9!UBERON:0003920;7.01e-08;9!UBERON:0004582;7.01e-08;9!UBERON:0002049;9.34e-08;75!UBERON:0007798;9.34e-08;75!UBERON:0003914;2.23e-07;74!UBERON:0002423;3.08e-07;25!UBERON:0002465;3.88e-07;10!UBERON:0002066;8.91e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,7.09e-26,22;UBERON:0004638,4.46e-25,18;UBERON:0001986,4.46e-25,18;UBERON:0004852,4.46e-25,18;UBERON:0010523,8.83e-23,3;UBERON:0001915,8.83e-23,3;UBERON:0001982,8.83e-23,3;UBERON:0006914,1.30e-22,25;UBERON:0003914,3.96e-15,117;UBERON:0000058,5.26e-14,19;UBERON:0000055,2.30e-13,68;UBERON:0002049,2.22e-11,78;UBERON:0007798,2.22e-11,78;UBERON:0010532,2.39e-10,7;UBERON:0000074,2.39e-10,7;UBERON:0001229,2.39e-10,7;UBERON:0001230,2.39e-10,7;UBERON:0003220,2.39e-10,7;UBERON:0005749,2.39e-10,7;UBERON:0004199,2.39e-10,7;UBERON:0004209,2.39e-10,7;UBERON:0004198,2.39e-10,7;UBERON:0005103,4.09e-09,8;UBERON:0000083,4.09e-09,8;UBERON:0009201,4.09e-09,8;UBERON:0006553,4.09e-09,8;UBERON:0003074,4.09e-09,8;UBERON:0003060,4.09e-09,8;UBERON:0007500,8.57e-09,59;UBERON:0001981,8.57e-09,59;UBERON:0004537,8.57e-09,59;UBERON:0006965,8.57e-09,59;UBERON:0001473,1.31e-08,8;UBERON:0004536,1.31e-08,8;UBERON:0006558,1.31e-08,8;UBERON:0004111,1.49e-08,240;UBERON:0000490,2.00e-08,148;UBERON:0000353,2.50e-08,15;UBERON:0000080,3.75e-08,9;UBERON:0002120,3.75e-08,9;UBERON:0004875,3.75e-08,9;UBERON:0005721,3.75e-08,9;UBERON:0005754,3.75e-08,9;UBERON:0007297,3.75e-08,9;UBERON:0002294,4.90e-08,9;UBERON:0001173,4.90e-08,9;UBERON:0004912,4.90e-08,9;UBERON:0000025,6.57e-08,192;UBERON:0001638,8.91e-08,9;UBERON:0003920,8.91e-08,9;UBERON:0004582,8.91e-08,9;UBERON:0004535,1.51e-07,109;UBERON:0007499,2.26e-07,25;UBERON:0001009,2.73e-07,112;UBERON:0009497,2.98e-07,25;UBERON:0000015,2.98e-07,25;UBERON:0002423,2.98e-07,25;UBERON:0006235,2.98e-07,25;UBERON:0004161,2.98e-07,25;UBERON:0009856,4.43e-07,26;UBERON:0002465,5.57e-07,10;UBERON:0004876,9.51e-07,11 | |||
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| ||
|short_description=p@chr4:56042389..56042433,+ | |||
}} | }} |
Latest revision as of 05:43, 30 July 2015
Short description: | p@chr4:56042389..56042433, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:56042389..56042433, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.65e-43 | 36 |
endothelial cell of vascular tree | 8.61e-35 | 24 |
meso-epithelial cell | 5.50e-34 | 45 |
lining cell | 9.44e-26 | 58 |
barrier cell | 9.44e-26 | 58 |
blood vessel endothelial cell | 4.46e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.46e-25 | 18 |
capillary endothelial cell | 8.83e-23 | 3 |
glomerular endothelial cell | 2.80e-14 | 5 |
vein endothelial cell | 2.05e-11 | 6 |
lymphangioblast | 2.64e-11 | 6 |
endothelial cell of lymphatic vessel | 2.64e-11 | 6 |
vascular lymphangioblast | 2.64e-11 | 6 |
mesodermal cell | 6.87e-11 | 121 |
endothelial cell of umbilical vein | 1.20e-10 | 3 |
glomerular cell | 2.39e-10 | 7 |
kidney corpuscule cell | 2.39e-10 | 7 |
epithelial cell | 4.01e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 3.31e-09 | 1 |
mucinous cystadenocarcinoma | 3.31e-09 | 1 |
osteosarcoma | 5.28e-09 | 1 |
organ system benign neoplasm | 1.13e-08 | 1 |
skin benign neoplasm | 1.13e-08 | 1 |
integumentary system benign neoplasm | 1.13e-08 | 1 |
dermis tumor | 1.13e-08 | 1 |
cutaneous fibrous histiocytoma | 1.13e-08 | 1 |