FFCP PHASE1:Hg19::chr5:175843524..175843547,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:175843524..175843547,-
|short_description=p1@CLTB
|description=CAGE_peak_1_at_CLTB_5end
|association_with_transcript=0bp_to_ENST00000502877,ENST00000510734...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1212 | |EntrezGene=1212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2091 | |HGNC=2091 | ||
|TSSclassifier=strong | |||
|UniProt=D6RJD1,B4DTF9,P09497 | |UniProt=D6RJD1,B4DTF9,P09497 | ||
|association_with_transcript=0bp_to_ENST00000502877,ENST00000510734,NM_001834,NM_007097,uc003meh.2,uc003mei.2,uc011dfn.1_5end | |||
|cluster_id=chr5:175843524..175843547,- | |||
|coexpression_cluster_id=C511 | |||
|description=CAGE_peak_1_at_CLTB_5end | |||
|id=chr5:175843524..175843547,- | |||
|ontology_enrichment_celltype=CL:0000066!2.35e-11!254;CL:0000220!7.79e-09!246;CL:0002321!3.51e-08!248;CL:0000222!9.22e-08!119;CL:0000076!4.70e-07!62;CL:0000359!8.33e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000349;9.42e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.77e-11,253;CL:0002321,2.81e-08,250;CL:0000222,7.69e-08,121;CL:0000076,3.29e-07,63;CL:0000359,8.33e-07,32;CL:0000349,9.63e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!4.36e-16!625;UBERON:0000480!7.48e-16!626;UBERON:0000064!7.83e-16!219;UBERON:0000481!7.83e-15!347;UBERON:0000475!5.58e-14!365;UBERON:0000468!7.98e-14!659;UBERON:0000119!7.29e-13!312;UBERON:0000483!1.51e-12!309;UBERON:0004111!2.47e-12!241;UBERON:0000477!4.15e-12!286;UBERON:0003104!1.45e-10!238;UBERON:0009142!1.45e-10!238;UBERON:0002050!1.59e-10!605;UBERON:0005423!1.59e-10!605;UBERON:0000923!2.15e-10!604;UBERON:0005291!2.15e-10!604;UBERON:0006598!2.15e-10!604;UBERON:0002532!2.15e-10!604;UBERON:0002100!6.19e-10!216;UBERON:0000062!1.94e-09!511;UBERON:0003102!3.64e-09!95;UBERON:0000922!4.89e-09!612;UBERON:0000055!7.36e-09!69;UBERON:0001637!7.65e-09!42;UBERON:0003509!7.65e-09!42;UBERON:0004572!7.65e-09!42;UBERON:0005256!9.19e-09!143;UBERON:0001981!1.07e-08!60;UBERON:0007500!1.07e-08!60;UBERON:0004537!1.07e-08!60;UBERON:0006965!1.07e-08!60;UBERON:0004119!1.17e-08!169;UBERON:0000925!1.17e-08!169;UBERON:0006595!1.17e-08!169;UBERON:0005631!1.75e-08!14;UBERON:0000158!1.75e-08!14;UBERON:0000025!4.95e-08!194;UBERON:0004872!5.69e-08!84;UBERON:0003914!1.19e-07!118;UBERON:0002049!1.38e-07!79;UBERON:0007798!1.38e-07!79;UBERON:0000486!5.02e-07!82;UBERON:0000914!6.14e-07!83;UBERON:0002329!6.14e-07!83;UBERON:0003077!6.14e-07!83;UBERON:0003059!6.14e-07!83;UBERON:0007282!6.14e-07!83;UBERON:0009618!6.14e-07!83;UBERON:0007285!6.14e-07!83 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.20e-12,309;UBERON:0004111,1.55e-12,240;UBERON:0000483,2.47e-12,306;UBERON:0003102,1.49e-10,99;UBERON:0005423,6.20e-10,581;UBERON:0004119,6.09e-09,160;UBERON:0000925,6.09e-09,160;UBERON:0006595,6.09e-09,160;UBERON:0001637,7.65e-09,42;UBERON:0003509,7.65e-09,42;UBERON:0004572,7.65e-09,42;UBERON:0000922,9.35e-09,592;UBERON:0000055,1.10e-08,68;UBERON:0007500,1.61e-08,59;UBERON:0001981,1.61e-08,59;UBERON:0004537,1.61e-08,59;UBERON:0006965,1.61e-08,59;UBERON:0002050,1.64e-08,564;UBERON:0005631,1.75e-08,14;UBERON:0000158,1.75e-08,14;UBERON:0000025,3.88e-08,192;UBERON:0002100,5.85e-08,199;UBERON:0004872,8.34e-08,83;UBERON:0003914,8.44e-08,117;UBERON:0004923,1.29e-07,66;UBERON:0000923,1.51e-07,560;UBERON:0010316,1.51e-07,560;UBERON:0005291,1.51e-07,560;UBERON:0006598,1.51e-07,560;UBERON:0010317,1.51e-07,560;UBERON:0002532,1.51e-07,560;UBERON:0002049,2.02e-07,78;UBERON:0007798,2.02e-07,78;UBERON:0001008,4.04e-07,48;UBERON:0006554,6.62e-07,47;UBERON:0000486,7.49e-07,83 | |||
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| ||
|short_description=p1@CLTB | |||
}} | }} |
Latest revision as of 04:19, 17 September 2015
Short description: | p1@CLTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLTB_5end |
Coexpression cluster: | C511_Placental_Alveolar_Bronchial_amniotic_Gingival_Corneal_Mammary |
Association with transcript: | 0bp_to_ENST00000502877, ENST00000510734, NM_001834, NM_007097, uc003meh.2, uc003mei.2, uc011dfn.1_5end |
EntrezGene: | CLTB |
HGNC: | 2091 |
UniProt: | D6RJD1B4DTF9P09497 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.77e-11 | 253 |
embryonic cell | 2.81e-08 | 250 |
mesodermal cell | 7.69e-08 | 121 |
squamous epithelial cell | 3.29e-07 | 63 |
vascular associated smooth muscle cell | 8.33e-07 | 32 |
extraembryonic cell | 9.63e-07 | 19 |