FFCP PHASE1:Hg19::chr5:44809032..44809067,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:44809032..44809067,+
|short_description=p1@MRPS30
|description=CAGE_peak_1_at_MRPS30_5end
|association_with_transcript=5bp_to_ENST00000507110,NM_016640,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10884 | |EntrezGene=10884 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8769 | |HGNC=8769 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NP92 | |UniProt=Q9NP92 | ||
|association_with_transcript=5bp_to_ENST00000507110,NM_016640,uc003joh.2_5end | |||
|cluster_id=chr5:44809032..44809067,+ | |||
|description=CAGE_peak_1_at_MRPS30_5end | |||
|id=chr5:44809032..44809067,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.04e-09!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.46e-09,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.35e-33!235;DOID:14566!2.47e-32!239;DOID:0050687!5.56e-26!143;DOID:305!1.72e-23!106;DOID:0050686!3.47e-10!137;DOID:2531!3.58e-09!51;DOID:0060083!3.58e-09!51;DOID:1240!1.88e-08!39;DOID:8692!2.53e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.20e-08;31!DOID:1240;4.80e-07;39!DOID:305;5.68e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.35e-33,235;DOID:14566,2.47e-32,239;DOID:0050687,5.56e-26,143;DOID:305,1.72e-23,106;DOID:0050686,3.47e-10,137;DOID:2531,3.58e-09,51;DOID:0060083,3.58e-09,51;DOID:1240,1.88e-08,39;DOID:8692,2.53e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.07e-13!94;UBERON:0001016!8.07e-13!94;UBERON:0002780!1.52e-12!41;UBERON:0001890!1.52e-12!41;UBERON:0006240!1.52e-12!41;UBERON:0003080!2.74e-12!42;UBERON:0005743!2.86e-12!86;UBERON:0001017!9.62e-12!82;UBERON:0000924!1.35e-11!173;UBERON:0006601!1.35e-11!173;UBERON:0001893!1.74e-11!34;UBERON:0001049!2.76e-11!57;UBERON:0005068!2.76e-11!57;UBERON:0006241!2.76e-11!57;UBERON:0007135!2.76e-11!57;UBERON:0001869!3.28e-11!32;UBERON:0004121!3.39e-11!169;UBERON:0002791!4.96e-11!33;UBERON:0002346!5.21e-11!90;UBERON:0002020!9.12e-11!34;UBERON:0003528!9.12e-11!34;UBERON:0003075!1.21e-10!86;UBERON:0007284!1.21e-10!86;UBERON:0003056!2.66e-10!61;UBERON:0000955!1.74e-09!69;UBERON:0006238!1.74e-09!69;UBERON:0002616!5.41e-09!59;UBERON:0000956!7.07e-09!25;UBERON:0000203!7.07e-09!25;UBERON:0002619!1.92e-08!22;UBERON:0000153!2.31e-08!129;UBERON:0007811!2.31e-08!129;UBERON:0001950!4.95e-08!20;UBERON:0000033!5.67e-08!123;UBERON:0001737!1.56e-07!9;UBERON:0007023!2.00e-07!115;UBERON:0001007!6.81e-07!155;UBERON:0001555!6.81e-07!155;UBERON:0007026!6.81e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.12e-10;32!UBERON:0001893;3.20e-10;34!UBERON:0002791;4.98e-10;32!UBERON:0003528;1.81e-09;34!UBERON:0002020;1.81e-09;34!UBERON:0002780;5.08e-09;41!UBERON:0001890;5.08e-09;41!UBERON:0000956;7.44e-09;25!UBERON:0000203;7.44e-09;25!UBERON:0002619;1.99e-08;22!UBERON:0001950;5.18e-08;20!UBERON:0001737;1.55e-07;9!UBERON:0001557;1.55e-07;9!UBERON:0000073;5.87e-07;53!UBERON:0002616;5.87e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.39e-14,223;UBERON:0002780,1.52e-12,41;UBERON:0001890,1.52e-12,41;UBERON:0003080,1.52e-12,41;UBERON:0006240,1.52e-12,41;UBERON:0001016,2.12e-12,89;UBERON:0001017,7.28e-12,81;UBERON:0001893,1.74e-11,34;UBERON:0000073,1.78e-11,53;UBERON:0002616,1.78e-11,53;UBERON:0001049,1.86e-11,56;UBERON:0005068,1.86e-11,56;UBERON:0006241,1.86e-11,56;UBERON:0007135,1.86e-11,56;UBERON:0001869,3.28e-11,32;UBERON:0002791,6.57e-11,32;UBERON:0004121,7.87e-11,171;UBERON:0000924,7.87e-11,171;UBERON:0006601,7.87e-11,171;UBERON:0003528,9.12e-11,34;UBERON:0002020,9.12e-11,34;UBERON:0003056,8.56e-10,61;UBERON:0002346,9.85e-10,86;UBERON:0010371,9.89e-10,104;UBERON:0000955,1.34e-09,68;UBERON:0006238,1.34e-09,68;UBERON:0003075,2.27e-09,82;UBERON:0007284,2.27e-09,82;UBERON:0000956,7.07e-09,25;UBERON:0000203,7.07e-09,25;UBERON:0002619,1.92e-08,22;UBERON:0001950,4.95e-08,20;UBERON:0001737,1.56e-07,9;UBERON:0007023,3.79e-07,114 | |||
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|short_description=p1@MRPS30 | |||
}} | }} |
Latest revision as of 01:05, 18 September 2015
Short description: | p1@MRPS30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRPS30_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000507110, NM_016640, uc003joh.2_5end |
EntrezGene: | MRPS30 |
HGNC: | 8769 |
UniProt: | Q9NP92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.46e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 2.39e-14 | 223 |
regional part of forebrain | 1.52e-12 | 41 |
forebrain | 1.52e-12 | 41 |
anterior neural tube | 1.52e-12 | 41 |
future forebrain | 1.52e-12 | 41 |
nervous system | 2.12e-12 | 89 |
central nervous system | 7.28e-12 | 81 |
telencephalon | 1.74e-11 | 34 |
regional part of nervous system | 1.78e-11 | 53 |
regional part of brain | 1.78e-11 | 53 |
neural tube | 1.86e-11 | 56 |
neural rod | 1.86e-11 | 56 |
future spinal cord | 1.86e-11 | 56 |
neural keel | 1.86e-11 | 56 |
cerebral hemisphere | 3.28e-11 | 32 |
regional part of telencephalon | 6.57e-11 | 32 |
ectoderm-derived structure | 7.87e-11 | 171 |
ectoderm | 7.87e-11 | 171 |
presumptive ectoderm | 7.87e-11 | 171 |
brain grey matter | 9.12e-11 | 34 |
gray matter | 9.12e-11 | 34 |
pre-chordal neural plate | 8.56e-10 | 61 |
neurectoderm | 9.85e-10 | 86 |
ecto-epithelium | 9.89e-10 | 104 |
brain | 1.34e-09 | 68 |
future brain | 1.34e-09 | 68 |
neural plate | 2.27e-09 | 82 |
presumptive neural plate | 2.27e-09 | 82 |
cerebral cortex | 7.07e-09 | 25 |
pallium | 7.07e-09 | 25 |
regional part of cerebral cortex | 1.92e-08 | 22 |
neocortex | 4.95e-08 | 20 |
larynx | 1.56e-07 | 9 |
adult organism | 3.79e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.35e-33 | 235 |
disease of cellular proliferation | 2.47e-32 | 239 |
cell type cancer | 5.56e-26 | 143 |
carcinoma | 1.72e-23 | 106 |
organ system cancer | 3.47e-10 | 137 |
hematologic cancer | 3.58e-09 | 51 |
immune system cancer | 3.58e-09 | 51 |
leukemia | 1.88e-08 | 39 |
myeloid leukemia | 2.53e-08 | 31 |