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{{MCL_coexpression_mm9
{
|coexpression_dpi_cluster_scores_mean=0.

Latest revision as of 14:32, 17 September 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr10:114239291..114239301,-p9@Trhde
Mm9::chr10:114239318..114239338,-p6@Trhde
Mm9::chr10:115580937..115580958,+p6@Ptprr
Mm9::chr10:115580966..115580978,+p12@Ptprr
Mm9::chr10:115580998..115581008,+p14@Ptprr
Mm9::chr10:4795909..4795925,+p7@Syne1
Mm9::chr10:4795927..4795941,+p13@Syne1
Mm9::chr10:4795942..4795975,+p9@Syne1
Mm9::chr10:4795978..4795991,+p20@Syne1
Mm9::chr10:4858251..4858273,+p@chr10:4858251..4858273
+
Mm9::chr10:4858285..4858297,+p@chr10:4858285..4858297
+
Mm9::chr10:4858303..4858340,+p@chr10:4858303..4858340
+
Mm9::chr10:4858345..4858352,+p@chr10:4858345..4858352
+
Mm9::chr10:48938179..48938182,-p@chr10:48938179..48938182
-
Mm9::chr10:49253904..49253910,-p@chr10:49253904..49253910
-
Mm9::chr10:49430439..49430445,-p@chr10:49430439..49430445
-
Mm9::chr10:60638339..60638349,+p10@Tbata
Mm9::chr10:78243215..78243286,+p1@Slc1a6
Mm9::chr10:89533756..89533760,+p@chr10:89533756..89533760
+
Mm9::chr10:89533840..89533862,+p@chr10:89533840..89533862
+
Mm9::chr10:89777497..89777501,+p@chr10:89777497..89777501
+
Mm9::chr11:100553754..100553787,-p1@Zfp385c
Mm9::chr11:101041408..101041415,+p@chr11:101041408..101041415
+
Mm9::chr11:101888192..101888216,-p2@Mpp3
Mm9::chr11:114712706..114712740,+p8@Gprc5c
Mm9::chr11:115128550..115128563,-p1@Grin2c
Mm9::chr11:118512308..118512311,-p@chr11:118512308..118512311
-
Mm9::chr11:33892981..33893009,-p3@Kcnip1
Mm9::chr11:3763719..3763730,-p11@Osbp2
Mm9::chr11:42134519..42134541,-p2@Gabra6
Mm9::chr11:42134547..42134558,-p1@Gabra6
Mm9::chr11:42134560..42134574,-p3@Gabra6
Mm9::chr11:42134576..42134585,-p4@Gabra6
Mm9::chr11:53841241..53841248,-p6@Slc22a4
Mm9::chr11:55150046..55150055,-p4@Fat2
Mm9::chr11:55150063..55150092,-p2@Fat2
Mm9::chr11:55150099..55150133,-p1@Fat2
Mm9::chr11:55150152..55150159,-p3@Fat2
Mm9::chr11:55151286..55151295,-p@chr11:55151286..55151295
-
Mm9::chr11:67465981..67465997,+p31@Gas7
Mm9::chr11:67466050..67466065,+p24@Gas7
Mm9::chr11:67466076..67466096,+p14@Gas7
Mm9::chr11:67466100..67466139,+p7@Gas7
Mm9::chr11:67466144..67466155,+p19@Gas7
Mm9::chr11:6963332..6963341,+p7@Adcy1
Mm9::chr11:70027425..70027446,+p4@Slc16a11
Mm9::chr11:7019745..7019748,+p@chr11:7019745..7019748
+
Mm9::chr11:87394608..87394627,+p5@Sept4
Mm9::chr11:87394648..87394655,+p11@Sept4
Mm9::chr11:92960534..92960544,+p11@Car10
Mm9::chr11:92960554..92960563,+p20@Car10
Mm9::chr11:92960979..92960990,+p9@Car10
Mm9::chr11:97398248..97398258,-p@chr11:97398248..97398258
-
Mm9::chr11:97398471..97398479,-p@chr11:97398471..97398479
-
Mm9::chr11:97398532..97398542,-p@chr11:97398532..97398542
-
Mm9::chr11:99141537..99141565,+p@chr11:99141537..99141565
+
Mm9::chr12:102137646..102137658,-p1@ENSMUST00000101128
Mm9::chr12:39510042..39510069,+p8@Etv1
Mm9::chr12:39510260..39510271,+p10@Etv1
Mm9::chr12:39510290..39510309,+p5@Etv1
Mm9::chr12:39556340..39556344,+p@chr12:39556340..39556344
+
Mm9::chr12:53606128..53606132,+p@chr12:53606128..53606132
+
Mm9::chr12:91050881..91050905,+p2@Nrxn3
Mm9::chr12:91051671..91051684,+p@chr12:91051671..91051684
+
Mm9::chr12:91477703..91477707,+p@chr12:91477703..91477707
+
Mm9::chr12:99816316..99816331,-p5@Kcnk10
Mm9::chr13:104146481..104146490,+p@chr13:104146481..104146490
+
Mm9::chr13:108954277..108954281,-p@chr13:108954277..108954281
-
Mm9::chr13:109906424..109906435,+p53@Pde4d
Mm9::chr13:109906442..109906471,+p35@Pde4d
Mm9::chr13:109906487..109906496,+p67@Pde4d
Mm9::chr13:109906519..109906528,+p81@Pde4d
Mm9::chr13:43748939..43748940,+p@chr13:43748939..43748940
+
Mm9::chr13:44216663..44216691,+p1@ENSMUST00000159595
Mm9::chr13:52626040..52626053,-p4@Diras2
Mm9::chr13:76522686..76522696,-p1@ENSMUST00000099365
Mm9::chr14:122196861..122196880,-p9@Dock9
Mm9::chr14:122783291..122783296,+p@chr14:122783291..122783296
+
Mm9::chr14:122874356..122874371,+p4@Zic2
Mm9::chr14:122874385..122874393,-p2@2610035F20Rik
Mm9::chr14:122874406..122874413,+p6@Zic2
Mm9::chr14:122883600..122883609,+p@chr14:122883600..122883609
+
Mm9::chr14:122883614..122883624,+p@chr14:122883614..122883624
+
Mm9::chr14:122883627..122883639,+p@chr14:122883627..122883639
+
Mm9::chr14:122883656..122883665,+p@chr14:122883656..122883665
+
Mm9::chr14:122883672..122883679,+p@chr14:122883672..122883679
+
Mm9::chr14:50306190..50306195,-p@chr14:50306190..50306195
-
Mm9::chr14:55672701..55672762,+p@chr14:55672701..55672762
+
Mm9::chr14:55673707..55673712,+p@chr14:55673707..55673712
+
Mm9::chr14:56503034..56503053,-p1@Cbln3
Mm9::chr14:56503060..56503074,-p3@Cbln3
Mm9::chr14:56503116..56503148,-p2@Cbln3
Mm9::chr14:56503204..56503213,-p4@Cbln3
Mm9::chr14:64225851..64225866,+p@chr14:64225851..64225866
+
Mm9::chr14:65206010..65206028,+p@chr14:65206010..65206028
+
Mm9::chr14:65208737..65208747,+p6@ENSMUST00000164162
Mm9::chr14:70862708..70862711,+p@chr14:70862708..70862711
+
Mm9::chr14:70920433..70920447,-p8@Bmp1
Mm9::chr14:70920463..70920489,-p5@Bmp1
Mm9::chr14:70954035..70954046,+p@chr14:70954035..70954046
+
Mm9::chr14:70963280..70963314,+p@chr14:70963280..70963314
+
Mm9::chr15:36140223..36140244,+p4@Spag1
Mm9::chr15:39223463..39223481,+p13@Rims2
Mm9::chr15:39223482..39223493,+p15@Rims2
Mm9::chr15:78032102..78032113,-p@chr15:78032102..78032113
-
Mm9::chr15:78034578..78034628,-p2@Pvalb
Mm9::chr15:89354065..89354076,-p2@ENSMUST00000155610
Mm9::chr15:89354183..89354224,+p@chr15:89354183..89354224
+
Mm9::chr15:89672234..89672245,-p4@Syt10
Mm9::chr15:99432014..99432020,-p@chr15:99432014..99432020
-
Mm9::chr16:36103789..36103796,+p@chr16:36103789..36103796
+
Mm9::chr16:6348749..6348773,+p13@Rbfox1
Mm9::chr16:6349254..6349265,+p16@Rbfox1
Mm9::chr16:89960715..89960726,-p@chr16:89960715..89960726
-
Mm9::chr16:89961060..89961073,-p7@Tiam1
Mm9::chr16:92485950..92485981,+p5@Clic6
Mm9::chr17:25854133..25854158,+p3@Gng13
Mm9::chr17:25854159..25854181,+p1@Gng13
Mm9::chr17:27563275..27563282,-p@chr17:27563275..27563282
-
Mm9::chr17:27563446..27563457,-p@chr17:27563446..27563457
-
Mm9::chr17:27573813..27573822,-p@chr17:27573813..27573822
-
Mm9::chr17:27573887..27573905,-p@chr17:27573887..27573905
-
Mm9::chr17:27573943..27573953,-p@chr17:27573943..27573953
-
Mm9::chr17:27573976..27573984,-p@chr17:27573976..27573984
-
Mm9::chr17:27574025..27574038,-p@chr17:27574025..27574038
-
Mm9::chr17:27582103..27582152,-p@chr17:27582103..27582152
-
Mm9::chr17:27604458..27604469,-p@chr17:27604458..27604469
-
Mm9::chr17:27604727..27604737,-p@chr17:27604727..27604737
-
Mm9::chr17:27604744..27604769,-p@chr17:27604744..27604769
-
Mm9::chr17:27604817..27604837,-p@chr17:27604817..27604837
-
Mm9::chr17:30197287..30197304,+p@chr17:30197287..30197304
+
Mm9::chr17:35153463..35153491,+p1@D17H6S56E-3
Mm9::chr17:47971631..47971639,-p13@Mdfi
Mm9::chr17:5492982..5492989,+p4@Zdhhc14
Mm9::chr17:66798939..66798954,-p5@1110012J17Rik
Mm9::chr17:66798964..66798990,-p2@1110012J17Rik
Mm9::chr17:80706641..80706646,+p6@Arhgef33
Mm9::chr17:80706657..80706667,+p4@Arhgef33
Mm9::chr17:80706723..80706734,+p2@Arhgef33
Mm9::chr17:80706736..80706753,+p1@Arhgef33
Mm9::chr17:80706799..80706809,+p3@Arhgef33
Mm9::chr17:8719861..8719890,+p5@Pde10a
Mm9::chr17:88787804..88787811,-p@chr17:88787804..88787811
-
Mm9::chr17:88787895..88787914,-p@chr17:88787895..88787914
-
Mm9::chr18:14131531..14131537,+p@chr18:14131531..14131537
+
Mm9::chr18:25663552..25663578,-p@chr18:25663552..25663578
-
Mm9::chr18:33098419..33098426,+p15@Camk4
Mm9::chr18:33098447..33098458,+p8@Camk4
Mm9::chr18:33098545..33098548,+p14@Camk4
Mm9::chr18:33098555..33098564,+p7@Camk4
Mm9::chr18:33098570..33098582,+p3@Camk4
Mm9::chr18:33099101..33099112,+p@chr18:33099101..33099112
+
Mm9::chr18:36262841..36262843,-p@chr18:36262841..36262843
-
Mm9::chr18:36285997..36285999,-p@chr18:36285997..36285999
-
Mm9::chr18:68478657..68478673,+p2@Rnmt
Mm9::chr18:77433508..77433512,+p@chr18:77433508..77433512
+
Mm9::chr19:10500513..10500524,+p@chr19:10500513..10500524
+
Mm9::chr19:10500634..10500647,+p@chr19:10500634..10500647
+
Mm9::chr19:22522497..22522530,+p3@Trpm3
Mm9::chr19:22522542..22522551,+p12@Trpm3
Mm9::chr19:44311483..44311510,+p@chr19:44311483..44311510
+
Mm9::chr19:4711427..4711438,+p13@Spnb3
Mm9::chr19:57083088..57083097,-p8@Afap1l2
Mm9::chr1:133422413..133422424,-p9@Srgap2
Mm9::chr1:136619991..136619995,+p@chr1:136619991..136619995
+
Mm9::chr1:155500236..155500306,+p1@Rgs8
Mm9::chr1:155512620..155512634,+p4@Rgs8
Mm9::chr1:155512717..155512725,+p12@Rgs8
Mm9::chr1:155512757..155512783,+p2@Rgs8
Mm9::chr1:155512796..155512809,+p5@Rgs8
Mm9::chr1:155514633..155514642,+p13@Rgs8
Mm9::chr1:155514765..155514770,+p25@Rgs8
Mm9::chr1:155514800..155514806,+p16@Rgs8
Mm9::chr1:156731476..156731487,-p@chr1:156731476..156731487
-
Mm9::chr1:175297986..175298017,-p2@Cadm3
Mm9::chr1:178143804..178143815,-p5@Pld5
Mm9::chr1:178143835..178143849,-p2@Pld5
Mm9::chr1:178143871..178143878,-p22@Pld5
Mm9::chr1:178143900..178143910,-p12@Pld5
Mm9::chr1:178144065..178144074,-p19@Pld5
Mm9::chr1:178144089..178144098,-p18@Pld5
Mm9::chr1:178144105..178144108,-p25@Pld5
Mm9::chr1:178144146..178144155,-p13@Pld5
Mm9::chr1:178144172..178144178,-p21@Pld5
Mm9::chr1:22519330..22519352,-p@chr1:22519330..22519352
-
Mm9::chr1:22519355..22519398,-p@chr1:22519355..22519398
-
Mm9::chr1:22519411..22519418,-p@chr1:22519411..22519418
-
Mm9::chr1:6720186..6720198,+p5@St18
Mm9::chr1:6720216..6720232,+p1@St18
Mm9::chr1:6724908..6724955,+p2@St18
Mm9::chr1:75367023..75367060,-p1@ENSMUST00000130095
Mm9::chr1:75437581..75437603,+p@chr1:75437581..75437603
+
Mm9::chr1:83404765..83404797,-p2@Sphkap
Mm9::chr1:83404842..83404865,-p4@Sphkap
Mm9::chr1:84692681..84692697,-p8@Dner
Mm9::chr1:84692708..84692713,-p15@Dner
Mm9::chr1:84692723..84692734,-p9@Dner
Mm9::chr2:120802884..120802921,+p2@Tmem62
Mm9::chr2:122194866..122194890,-p1@Shf
Mm9::chr2:155604409..155604419,+p@chr2:155604409..155604419
+
Mm9::chr2:167311149..167311158,-p6@Spata2
Mm9::chr2:177853817..177853863,+p3@Phactr3
Mm9::chr2:177853871..177853888,+p18@Phactr3
Mm9::chr2:25437136..25437145,-p@chr2:25437136..25437145
-
Mm9::chr2:25437162..25437176,-p@chr2:25437162..25437176
-
Mm9::chr2:32941749..32941761,-p16@Garnl3
Mm9::chr2:32941773..32941784,-p12@Garnl3
Mm9::chr2:32941787..32941804,-p8@Garnl3
Mm9::chr2:35477519..35477524,+p10@Dab2ip
Mm9::chr2:35477530..35477583,+p1@Dab2ip
Mm9::chr2:52068286..52068296,-p@chr2:52068286..52068296
-
Mm9::chr2:52414048..52414057,-p11@Cacnb4
Mm9::chr2:55264224..55264230,+p1@ENSMUST00000128307
p1@uc008jrt.1
Mm9::chr2:77300697..77300704,+p1@Gm13944
Mm9::chr2:77654737..77654748,-p17@Zfp385b
Mm9::chr2:77654767..77654784,-p12@Zfp385b
Mm9::chr2:91803886..91803897,-p11@Dgkz
Mm9::chr2:91803903..91803917,-p8@Dgkz
Mm9::chr3:103655165..103655172,+p@chr3:103655165..103655172
+
Mm9::chr3:103655192..103655202,+p@chr3:103655192..103655202
+
Mm9::chr3:103655212..103655227,+p@chr3:103655212..103655227
+
Mm9::chr3:103655231..103655246,+p@chr3:103655231..103655246
+
Mm9::chr3:103655256..103655267,+p@chr3:103655256..103655267
+
Mm9::chr3:106904684..106904721,+p@chr3:106904684..106904721
+
Mm9::chr3:114607270..114607299,+p2@Olfm3
Mm9::chr3:114616531..114616534,+p@chr3:114616531..114616534
+
Mm9::chr3:115711322..115711333,+p6@Extl2
Mm9::chr3:123391603..123391604,-p@chr3:123391603..123391604
-
Mm9::chr3:123393041..123393094,-p@chr3:123393041..123393094
-
Mm9::chr3:123393768..123393801,-p3@Ndst3
Mm9::chr3:126928934..126928939,-p33@Ank2
Mm9::chr3:126928993..126929014,-p21@Ank2
Mm9::chr3:13473205..13473218,+p4@Ralyl
Mm9::chr3:64753133..64753141,+p21@Kcnab1
Mm9::chr3:64753151..64753165,+p16@Kcnab1
Mm9::chr3:64753212..64753217,+p@chr3:64753212..64753217
+
Mm9::chr3:88420055..88420073,+p7@Arhgef2
Mm9::chr4:101760320..101760339,+p23@Pde4b
Mm9::chr4:115894294..115894303,+p5@Pik3r3
Mm9::chr4:128560793..128560855,+p1@Trim62
Mm9::chr4:128579450..128579455,+p@chr4:128579450..128579455
+
Mm9::chr4:151665764..151665768,-p3@Hes3
Mm9::chr4:151665772..151665781,-p1@Hes3
Mm9::chr4:151671314..151671329,+p3@Icmt
Mm9::chr4:151671359..151671364,+p5@Icmt
Mm9::chr4:154393492..154393500,-p3@Plch2
Mm9::chr4:154393506..154393507,-p9@Plch2
Mm9::chr4:154393508..154393546,-p1@Plch2
Mm9::chr4:154771148..154771160,+p@chr4:154771148..154771160
+
Mm9::chr4:154771164..154771178,+p@chr4:154771164..154771178
+
Mm9::chr4:154771192..154771199,+p@chr4:154771192..154771199
+
Mm9::chr4:24899611..24899616,+p@chr4:24899611..24899616
+
Mm9::chr4:24899655..24899668,+p@chr4:24899655..24899668
+
Mm9::chr4:24937527..24937532,+p@chr4:24937527..24937532
+
Mm9::chr4:8069965..8069968,-p@chr4:8069965..8069968
-
Mm9::chr4:8166181..8166194,-p1@Car8
Mm9::chr4:98216369..98216408,+p@chr4:98216369..98216408
+
Mm9::chr5:113919535..113919568,+p1@Wscd2
Mm9::chr5:113919600..113919618,+p2@Wscd2
Mm9::chr5:114453687..114453702,+p4@Dao
Mm9::chr5:114453734..114453746,+p5@Dao
Mm9::chr5:122580415..122580430,-p@chr5:122580415..122580430
-
Mm9::chr5:130845117..130845159,+p13@Caln1
Mm9::chr5:130845277..130845287,+p8@Caln1
Mm9::chr5:130845290..130845344,+p1@Caln1
Mm9::chr5:130845351..130845365,+p4@Caln1
Mm9::chr5:130845392..130845395,+p23@Caln1
Mm9::chr5:130983959..130983969,+p@chr5:130983959..130983969
+
Mm9::chr5:131153430..131153431,+p@chr5:131153430..131153431
+
Mm9::chr5:142985607..142985618,-p3@Radil
Mm9::chr5:143168411..143168435,+p@chr5:143168411..143168435
+
Mm9::chr5:143168436..143168456,+p@chr5:143168436..143168456
+
Mm9::chr5:143170052..143170056,+p@chr5:143170052..143170056
+
Mm9::chr5:144131740..144131758,+p3@Grid2ip
Mm9::chr5:144131783..144131797,+p2@Grid2ip
Mm9::chr5:27231222..27231250,+p15@Dpp6
Mm9::chr5:28536444..28536454,-p5@Cnpy1
Mm9::chr5:28536456..28536475,-p1@Cnpy1
Mm9::chr5:28536571..28536574,-p18@Cnpy1
Mm9::chr5:28536607..28536622,-p2@Cnpy1
Mm9::chr5:28536627..28536640,-p10@Cnpy1
Mm9::chr5:28536932..28536936,-p15@Cnpy1
Mm9::chr5:28536938..28536945,-p13@Cnpy1
Mm9::chr5:28536954..28536968,-p4@Cnpy1
Mm9::chr5:28564419..28564428,-p9@Cnpy1
Mm9::chr5:48991226..48991239,-p7@Kcnip4
Mm9::chr5:49280770..49280792,-p4@Kcnip4
Mm9::chr5:89222890..89222899,+p2@uc008yai.1
Mm9::chr5:89222911..89222922,+p1@uc008yai.1
Mm9::chr5:89222958..89222961,+p3@uc008yai.1
Mm9::chr5:89222967..89222970,+p4@uc008yai.1
Mm9::chr5:89244856..89244865,+p@chr5:89244856..89244865
+
Mm9::chr5:89254205..89254209,+p@chr5:89254205..89254209
+
Mm9::chr5:89652882..89652912,-p@chr5:89652882..89652912
-
Mm9::chr6:104543156..104543160,+p@chr6:104543156..104543160
+
Mm9::chr6:108163080..108163117,+p1@Itpr1
Mm9::chr6:113342504..113342511,+p@chr6:113342504..113342511
+
Mm9::chr6:119798111..119798131,-p2@Erc1
Mm9::chr6:140439545..140439567,+p@chr6:140439545..140439567
+
Mm9::chr6:21165358..21165387,+p1@Kcnd2
Mm9::chr6:21165414..21165435,+p2@Kcnd2
Mm9::chr6:21165472..21165484,+p4@Kcnd2
Mm9::chr6:21165552..21165563,+p10@Kcnd2
Mm9::chr6:21183444..21183447,+p@chr6:21183444..21183447
+
Mm9::chr6:21233421..21233425,+p@chr6:21233421..21233425
+
Mm9::chr6:21466570..21466573,+p@chr6:21466570..21466573
+
Mm9::chr6:53989491..53989550,+p3@Chn2
Mm9::chr6:53989552..53989569,+p11@Chn2
Mm9::chr6:53989584..53989599,+p12@Chn2
Mm9::chr6:53989640..53989689,+p2@Chn2
Mm9::chr6:53989703..53989727,+p9@Chn2
Mm9::chr6:53989740..53989755,+p18@Chn2
Mm9::chr6:53990072..53990085,+p13@Chn2
Mm9::chr6:53991372..53991376,+p@chr6:53991372..53991376
+
Mm9::chr6:55967483..55967511,+p1@Ppp1r17
Mm9::chr6:63205886..63205897,+p5@Grid2
Mm9::chr6:63205965..63206030,+p1@Grid2
Mm9::chr6:63206046..63206063,+p6@Grid2
Mm9::chr6:63206088..63206098,+p8@Grid2
Mm9::chr6:63206353..63206375,+p4@Grid2
Mm9::chr6:63286728..63286731,+p@chr6:63286728..63286731
+
Mm9::chr6:63496752..63496754,+p@chr6:63496752..63496754
+
Mm9::chr6:63555429..63555434,+p@chr6:63555429..63555434
+
Mm9::chr6:73088941..73088945,-p7@Dnahc6
Mm9::chr7:129432236..129432248,+p4@Prkcb
Mm9::chr7:129432259..129432269,+p8@Prkcb
Mm9::chr7:139825588..139825622,+p@chr7:139825588..139825622
+
Mm9::chr7:148546107..148546129,+p3@Eps8l2
Mm9::chr7:148546135..148546146,+p4@Eps8l2
Mm9::chr7:148620369..148620385,-p6@Slc25a22
Mm9::chr7:151361160..151361177,+p14@Shank2
Mm9::chr7:26091239..26091252,+p2@Tmem145
Mm9::chr7:50822983..50822986,+p@chr7:50822983..50822986
+
Mm9::chr7:51850687..51850699,+p@chr7:51850687..51850699
+
Mm9::chr7:51881060..51881089,-p@chr7:51881060..51881089
-
Mm9::chr7:51881202..51881208,-p@chr7:51881202..51881208
-
Mm9::chr7:53651618..53651628,+p11@Kcnc1
Mm9::chr7:69033441..69033444,-p@chr7:69033441..69033444
-
Mm9::chr7:69127176..69127192,-p1@A330076H08Rik
Mm9::chr7:90845967..90845973,-p@chr7:90845967..90845973
-
Mm9::chr7:90846073..90846078,-p@chr7:90846073..90846078
-
Mm9::chr7:90855278..90855283,-p@chr7:90855278..90855283
-
Mm9::chr7:90880856..90880867,-p11@Il16
Mm9::chr7:90883936..90883946,-p9@Il16
Mm9::chr7:90883950..90883973,-p3@Il16
Mm9::chr7:90883982..90883999,-p8@Il16
Mm9::chr7:90884013..90884027,-p6@Il16
Mm9::chr7:90884044..90884053,-p13@Il16
Mm9::chr7:98860173..98860197,+p11@Dlg2
Mm9::chr8:113481627..113481653,+p@chr8:113481627..113481653
+
Mm9::chr8:113481661..113481674,+p@chr8:113481661..113481674
+
Mm9::chr8:122159453..122159475,-p2@Kcng4
Mm9::chr8:24132441..24132444,+p@chr8:24132441..24132444
+
Mm9::chr8:3624659..3624667,-p@chr8:3624659..3624667
-
Mm9::chr8:3624970..3624983,-p5@Pcp2
Mm9::chr8:3624989..3625014,-p3@Pcp2
Mm9::chr8:3625025..3625042,-p2@Pcp2
Mm9::chr8:3625206..3625212,-p8@Pcp2
Mm9::chr8:3625246..3625253,-p7@Pcp2
Mm9::chr8:3625274..3625288,-p1@Pcp2
Mm9::chr8:3625289..3625297,-p9@Pcp2
Mm9::chr8:37521134..37521147,+p4@6430573F11Rik
Mm9::chr8:37521149..37521162,+p5@6430573F11Rik
Mm9::chr8:37521164..37521213,+p1@6430573F11Rik
Mm9::chr8:37521215..37521260,+p2@6430573F11Rik
Mm9::chr8:42139964..42139996,-p20@Mtus1
Mm9::chr8:72806877..72806943,+p1@Homer3
Mm9::chr8:72806954..72806979,+p2@Homer3
Mm9::chr8:86862537..86862557,+p@chr8:86862537..86862557
+
Mm9::chr8:86862574..86862580,+p@chr8:86862574..86862580
+
Mm9::chr8:86939247..86939291,+p2@Cacna1a
Mm9::chr8:86992571..86992576,+p@chr8:86992571..86992576
+
Mm9::chr8:87295869..87295882,-p@chr8:87295869..87295882
-
Mm9::chr8:89994195..89994201,-p@chr8:89994195..89994201
-
Mm9::chr8:89994350..89994360,-p@chr8:89994350..89994360
-
Mm9::chr8:89994538..89994550,-p@chr8:89994538..89994550
-
Mm9::chr8:89994567..89994576,-p@chr8:89994567..89994576
-
Mm9::chr8:89996264..89996280,-p5@Cbln1
Mm9::chr8:89996442..89996470,-p1@Cbln1
Mm9::chr8:89996475..89996496,-p3@Cbln1
Mm9::chr8:89996502..89996513,-p4@Cbln1
Mm9::chr8:89996514..89996532,-p2@Cbln1
Mm9::chr8:89996670..89996681,+p2@Gm2694
Mm9::chr8:89996704..89996721,+p1@Gm2694
Mm9::chr8:89996737..89996748,+p3@ENSMUST00000149951
Mm9::chr8:89996765..89996779,+p1@ENSMUST00000149951
Mm9::chr8:89996788..89996793,+p4@ENSMUST00000149951
Mm9::chr8:89997052..89997062,+p4@ENSMUST00000168307
Mm9::chr9:100367236..100367247,-p3@Il20rb
Mm9::chr9:100367276..100367285,-p5@Il20rb
Mm9::chr9:100367288..100367300,-p2@Il20rb
Mm9::chr9:100367303..100367312,-p6@Il20rb
Mm9::chr9:106362954..106362977,+p6@Pcbp4
Mm9::chr9:106362981..106362988,+p12@Pcbp4
Mm9::chr9:21599436..21599441,-p@chr9:21599436..21599441
-
Mm9::chr9:21599455..21599466,-p@chr9:21599455..21599466
-
Mm9::chr9:21599505..21599519,-p@chr9:21599505..21599519
-
Mm9::chr9:25070761..25070774,+p@chr9:25070761..25070774
+
Mm9::chr9:29219962..29219978,-p13@Ntm
Mm9::chr9:34605387..34605391,+p@chr9:34605387..34605391
+
Mm9::chr9:40792543..40792557,-p3@Crtam
Mm9::chr9:40792562..40792570,-p4@Crtam
Mm9::chr9:40792571..40792583,-p2@Crtam
Mm9::chr9:40792584..40792585,-p6@Crtam
Mm9::chr9:4795914..4795928,-p7@Gria4
Mm9::chr9:4795951..4795964,-p12@Gria4
Mm9::chr9:4795969..4795987,-p8@Gria4
Mm9::chr9:50536222..50536234,-p9@Dixdc1
Mm9::chr9:50536335..50536356,-p6@Dixdc1
Mm9::chr9:50536361..50536371,-p12@Dixdc1
Mm9::chr9:53129836..53129847,+p@chr9:53129836..53129847
+
Mm9::chr9:53129850..53129857,+p@chr9:53129850..53129857
+
Mm9::chr9:53149165..53149185,+p7@Exph5
Mm9::chr9:53149187..53149206,+p10@Exph5
Mm9::chr9:55174744..55174765,+p2@AI118078
Mm9::chr9:55174766..55174787,+p1@AI118078
Mm9::chr9:62384707..62384718,-p11@Coro2b
Mm9::chr9:64233482..64233505,+p1@Megf11
Mm9::chr9:64244434..64244439,+p@chr9:64244434..64244439
+
Mm9::chr9:64333776..64333780,+p@chr9:64333776..64333780
+
Mm9::chr9:64392734..64392737,+p@chr9:64392734..64392737
+
Mm9::chr9:73679089..73679094,-p@chr9:73679089..73679094
-
Mm9::chr9:91276259..91276270,-p@chr9:91276259..91276270
-
Mm9::chr9:91856007..91856017,-p@chr9:91856007..91856017
-
Mm9::chrX:135534212..135534227,+p@chrX:135534212..135534227
+
Mm9::chrX:136919243..136919245,-p@chrX:136919243..136919245
-
Mm9::chrX:136920397..136920409,-p@chrX:136920397..136920409
-
Mm9::chrX:40505925..40505930,-p@chrX:40505925..40505930
-
Mm9::chrX:70748081..70748092,+p7@Atp2b3
Mm9::chrX:70748116..70748157,+p4@Atp2b3
Mm9::chrX:70748181..70748223,+p3@Atp2b3


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0005216ion channel activity1.63774054743321e-09
GO:0022838substrate specific channel activity1.63774054743321e-09
GO:0022803passive transmembrane transporter activity1.86923100814581e-09
GO:0015267channel activity1.86923100814581e-09
GO:0022892substrate-specific transporter activity4.70974134581281e-09
GO:0022836gated channel activity6.21590362878898e-09
GO:0015075ion transmembrane transporter activity1.28031085804656e-08
GO:0022857transmembrane transporter activity6.17442837630027e-08
GO:0022891substrate-specific transmembrane transporter activity1.29331922835659e-07
GO:0006811ion transport4.11433623995841e-07
GO:0051179localization9.38420198635919e-07
GO:0046873metal ion transmembrane transporter activity1.11501881861437e-06
GO:0005261cation channel activity1.65259073179895e-06
GO:0022832voltage-gated channel activity3.88665630831102e-06
GO:0005244voltage-gated ion channel activity3.88665630831102e-06
GO:0051234establishment of localization4.47507893605575e-06
GO:0006810transport8.31090052839595e-06
GO:0030054cell junction2.49627488802123e-05
GO:0008324cation transmembrane transporter activity2.78171798657946e-05
GO:0044456synapse part3.04880083778431e-05
GO:0044459plasma membrane part4.87302170916916e-05
GO:0005886plasma membrane6.99852829746216e-05
GO:0043167ion binding6.99852829746216e-05
GO:0006812cation transport0.000132563764960938
GO:0030001metal ion transport0.000132563764960938
GO:0005509calcium ion binding0.000132563764960938
GO:0046872metal ion binding0.000321186068935908
GO:0043169cation binding0.0007975472545692
GO:0014051gamma-aminobutyric acid secretion0.00115752704513594
GO:0016020membrane0.00128676240087821
GO:0007242intracellular signaling cascade0.00132507572060849
GO:0045211postsynaptic membrane0.00144143804496103
GO:0030955potassium ion binding0.0014712886710819
GO:0042995cell projection0.00178097047682171
GO:0030695GTPase regulator activity0.00178097047682171
GO:0022843voltage-gated cation channel activity0.00181513801051948
GO:0005891voltage-gated calcium channel complex0.00184542344627076
GO:0005267potassium channel activity0.00226284093603648
GO:0031420alkali metal ion binding0.00226284093603648
GO:0003779actin binding0.00242554453585042
GO:0005234extracellular-glutamate-gated ion channel activity0.00299773570106501
GO:0008066glutamate receptor activity0.00299773570106501
GO:0022834ligand-gated channel activity0.00299773570106501
GO:0015276ligand-gated ion channel activity0.00299773570106501
GO:0004970ionotropic glutamate receptor activity0.00334282620711643
GO:0005515protein binding0.00357575201637856
GO:0008092cytoskeletal protein binding0.00357575201637856
GO:0007214gamma-aminobutyric acid signaling pathway0.00370535511664569
GO:0007216metabotropic glutamate receptor signaling pathway0.00407834144526985
GO:0046058cAMP metabolic process0.00416671473348487
GO:0005245voltage-gated calcium channel activity0.00474517782371481
GO:0005096GTPase activator activity0.00532798463033904
GO:0006813potassium ion transport0.00561022880187941
GO:0050881musculoskeletal movement0.00603207185723325
GO:0050879multicellular organismal movement0.00603207185723325
GO:0006816calcium ion transport0.00616124866551924
GO:00041143',5'-cyclic-nucleotide phosphodiesterase activity0.00616124866551924
GO:0007270nerve-nerve synaptic transmission0.00616124866551924
GO:0051015actin filament binding0.00616124866551924
GO:0004112cyclic-nucleotide phosphodiesterase activity0.00771544358280764
GO:0008331high voltage-gated calcium channel activity0.00812628727241511
GO:0008081phosphoric diester hydrolase activity0.00928275007838412
GO:0005230extracellular ligand-gated ion channel activity0.00928275007838412
GO:0043005neuron projection0.00974371848507528
GO:0005262calcium channel activity0.0100930192112849
GO:0019932second-messenger-mediated signaling0.0123160850868702
GO:0044464cell part0.0141804090146408
GO:0005623cell0.0141804090146408
GO:0015674di-, tri-valent inorganic cation transport0.016718454095615
GO:0035249synaptic transmission, glutamatergic0.016797493205983
GO:0008047enzyme activator activity0.0179647894081325
GO:0009187cyclic nucleotide metabolic process0.0183197382585951
GO:0007215glutamate signaling pathway0.0200555370586092
GO:0015672monovalent inorganic cation transport0.0211450117671988
GO:0003001generation of a signal involved in cell-cell signaling0.0231876464974608
GO:0005231excitatory extracellular ligand-gated ion channel activity0.0247678782734796
GO:0042391regulation of membrane potential0.0247678782734796
GO:0014069postsynaptic density0.0272654741047312
GO:0050808synapse organization and biogenesis0.0272654741047312
GO:0048015phosphoinositide-mediated signaling0.0272654741047312
GO:0019992diacylglycerol binding0.0287279809683155
GO:0050905neuromuscular process0.0321484501795127
GO:0030425dendrite0.0337326049120814
GO:0030029actin filament-based process0.0349359976435137
GO:0017016Ras GTPase binding0.0349359976435137
GO:0031267small GTPase binding0.0382496195692279
GO:0007269neurotransmitter secretion0.0382496195692279
GO:0019717synaptosome0.0399575013426778
GO:0005516calmodulin binding0.0407824515600866
GO:0005089Rho guanyl-nucleotide exchange factor activity0.0407824515600866
GO:0051020GTPase binding0.0444367707127684
GO:0051899membrane depolarization0.0444367707127684
GO:0043025cell soma0.0444367707127684
GO:0007416synaptogenesis0.0444367707127684
GO:0005088Ras guanyl-nucleotide exchange factor activity0.0444367707127684
GO:0004089carbonate dehydratase activity0.0444367707127684
GO:0017137Rab GTPase binding0.0444367707127684
GO:0007268synaptic transmission0.0444367707127684
GO:0021548pons development0.0444367707127684
GO:0032353negative regulation of hormone biosynthetic process0.0444367707127684
GO:0002860positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target0.0444367707127684
GO:0002717positive regulation of natural killer cell mediated immunity0.0444367707127684
GO:0021626central nervous system maturation0.0444367707127684
GO:0005845mRNA cap complex0.0444367707127684
GO:0016921pyroglutamyl-peptidase II activity0.0444367707127684
GO:0002420natural killer cell mediated cytotoxicity directed against tumor cell target0.0444367707127684
GO:0002858regulation of natural killer cell mediated cytotoxicity directed against tumor cell target0.0444367707127684
GO:00469351-phosphatidylinositol-3-kinase regulator activity0.0444367707127684
GO:0032351negative regulation of hormone metabolic process0.0444367707127684
GO:0002715regulation of natural killer cell mediated immunity0.0444367707127684
GO:0021679cerebellar molecular layer development0.0444367707127684
GO:0006551leucine metabolic process0.0444367707127684
GO:0050882voluntary musculoskeletal movement0.0444367707127684
GO:0021590cerebellum maturation0.0444367707127684
GO:0021750vestibular nucleus development0.0444367707127684
GO:0002355detection of tumor cell0.0444367707127684
GO:0021578hindbrain maturation0.0444367707127684
GO:0048541Peyer's patch development0.0444367707127684
GO:0004671protein-S-isoprenylcysteine O-methyltransferase activity0.0444367707127684
GO:0048791calcium ion-dependent exocytosis of neurotransmitter0.0444367707127684
GO:0006198cAMP catabolic process0.0444367707127684
GO:0017026procollagen C-endopeptidase activity0.0444367707127684
GO:0004482mRNA (guanine-N7-)-methyltransferase activity0.0444367707127684
GO:0002423natural killer cell mediated immune response to tumor cell0.0444367707127684
GO:0002855regulation of natural killer cell mediated immune response to tumor cell0.0444367707127684
GO:0002857positive regulation of natural killer cell mediated immune response to tumor cell0.0444367707127684
GO:0005085guanyl-nucleotide exchange factor activity0.0444367707127684
GO:0051969regulation of transmission of nerve impulse0.0453853625805822
GO:0017156calcium ion-dependent exocytosis0.0453853625805822
GO:0050804regulation of synaptic transmission0.0453853625805822
GO:0045055regulated secretory pathway0.0476917705886419
GO:0051056regulation of small GTPase mediated signal transduction0.0479115883147536



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
regional part of nervous system1.46e-1654
neural tube2.99e-1552
neural rod2.99e-1552
future spinal cord2.99e-1552
neural keel2.99e-1552
neurectoderm3.27e-1564
neural plate3.27e-1564
presumptive neural plate3.27e-1564
regional part of brain3.01e-1346
central nervous system5.03e-1373
ecto-epithelium6.50e-1373
brain6.58e-1347
future brain6.58e-1347
nervous system1.38e-1275
ectoderm-derived structure9.47e-1295
ectoderm9.47e-1295
presumptive ectoderm9.47e-1295
posterior neural tube6.01e-1112
chordal neural plate6.01e-1112
segmental subdivision of hindbrain1.08e-106
segmental subdivision of nervous system1.08e-106
hindbrain1.08e-106
presumptive hindbrain1.08e-106
structure with developmental contribution from neural crest1.56e-0992
regional part of midbrain7.68e-094
midbrain7.68e-094
presumptive midbrain7.68e-094
midbrain neural tube7.68e-094
medulla oblongata1.27e-082
brainstem1.27e-082
myelencephalon1.27e-082
future myelencephalon1.27e-082
pre-chordal neural plate2.25e-0849
anterior neural tube1.92e-0740


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.10.104774
MA0004.10.00331399
MA0006.13.63313
MA0007.10.000157006
MA0009.10.179001
MA0014.10.788613
MA0017.10.0519533
MA0019.10.236912
MA0024.10.116463
MA0025.10.798157
MA0027.10.82059
MA0028.10.000644765
MA0029.10.666094
MA0030.10.167061
MA0031.10.0138987
MA0038.10.310951
MA0040.10.059118
MA0041.10.108845
MA0042.10.103911
MA0043.10.0645056
MA0046.10.0759365
MA0048.11.60704
MA0050.10.0518315
MA0051.10.0324742
MA0052.10.485778
MA0055.16.36223
MA0056.10
MA0057.10.917773
MA0058.18.27834e-05
MA0059.10.0894667
MA0060.10.000581188
MA0061.10.774311
MA0063.10
MA0066.11.18814
MA0067.10.356566
MA0068.10.0613993
MA0069.10.486906
MA0070.10.310987
MA0071.11.53843
MA0072.12.20595
MA0073.10.00619904
MA0074.10.000262135
MA0076.11.84401e-06
MA0077.10.0408477
MA0078.10.288739
MA0081.10.555085
MA0083.10.00658751
MA0084.10.332744
MA0087.10.0898997
MA0088.10.816321
MA0089.10
MA0090.10.0281708
MA0091.11.37513
MA0092.11.89242
MA0093.10.000143678
MA0095.10
MA0098.10
MA0100.10.012682
MA0101.10.240762
MA0103.11.00551
MA0105.10.299129
MA0106.10.316028
MA0107.10.265461
MA0108.20.0854501
MA0109.10
MA0111.11.76132
MA0113.10.0414189
MA0114.10.0360622
MA0115.10.0255668
MA0116.10.382584
MA0117.10.0478371
MA0119.111.8058
MA0122.10.058686
MA0124.10.131238
MA0125.10.503175
MA0130.10
MA0131.10.152394
MA0132.10
MA0133.10
MA0135.10.178732
MA0136.10.00750819
MA0139.13.75317
MA0140.10.322804
MA0141.10.380239
MA0142.10.347938
MA0143.10.198225
MA0144.10.0911197
MA0145.10.563254
MA0146.10.000445911
MA0147.10.209801
MA0148.10.240958
MA0149.10.00152674
MA0062.23.75382e-09
MA0035.20.343922
MA0039.20.0221518
MA0138.21.01132
MA0002.20.77005
MA0137.20.00114855
MA0104.20.499053
MA0047.20.0266296
MA0112.25.00887
MA0065.20.247908
MA0150.10.178088
MA0151.10
MA0152.10.308405
MA0153.10.341569
MA0154.10.980189
MA0155.10.373651
MA0156.14.9446e-06
MA0157.10.0153772
MA0158.10
MA0159.11.1878
MA0160.10.145135
MA0161.10
MA0162.10.0980195
MA0163.10.833287
MA0164.10.217938
MA0080.20.00980057
MA0018.20.0019342
MA0099.20.126798
MA0079.20.359195
MA0102.20.393695
MA0258.12.89107
MA0259.10.3138
MA0442.10
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